Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28n24
(374 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 177 3e-47
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 176 8e-47
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 59 1e-11
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 48 5e-08
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.22
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.51
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 1.2
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 4.8
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 4.8
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 4.8
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 20 8.3
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 177 bits (431), Expect = 3e-47
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +2
Query: 62 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 241
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 242 DKLKAERERGITIDIALWKFETSQ 313
DKLKAERERGITIDIALWKFETS+
Sbjct: 61 DKLKAERERGITIDIALWKFETSK 84
Score = 47.6 bits (108), Expect = 5e-08
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +3
Query: 309 AKYYVTIIDAPGHRDFIXNMIT 374
+KYYVTIIDAPGHRDFI NMIT
Sbjct: 83 SKYYVTIIDAPGHRDFIKNMIT 104
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 176 bits (428), Expect = 8e-47
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +2
Query: 62 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 241
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 242 DKLKAERERGITIDIALWKFETSQ 313
DKLKAERERGITIDIALWKFET++
Sbjct: 61 DKLKAERERGITIDIALWKFETAK 84
Score = 48.8 bits (111), Expect = 2e-08
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +3
Query: 309 AKYYVTIIDAPGHRDFIXNMIT 374
AKYYVTIIDAPGHRDFI NMIT
Sbjct: 83 AKYYVTIIDAPGHRDFIKNMIT 104
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 59.3 bits (137), Expect = 1e-11
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +2
Query: 233 WVLDKLKAERERGITIDIALWKFETSQ 313
WVLDKLKAERERGITIDIALWKFETS+
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSK 27
Score = 47.6 bits (108), Expect = 5e-08
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +3
Query: 309 AKYYVTIIDAPGHRDFIXNMIT 374
+KYYVTIIDAPGHRDFI NMIT
Sbjct: 26 SKYYVTIIDAPGHRDFIKNMIT 47
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 47.6 bits (108), Expect = 5e-08
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +3
Query: 309 AKYYVTIIDAPGHRDFIXNMIT 374
+KYYVTIIDAPGHRDFI NMIT
Sbjct: 10 SKYYVTIIDAPGHRDFIKNMIT 31
Score = 26.2 bits (55), Expect = 0.13
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2
Query: 281 DIALWKFETSQ 313
DIALWKFETS+
Sbjct: 1 DIALWKFETSK 11
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 25.4 bits (53), Expect = 0.22
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 74 KTHINIVVIGHVDSGKST 127
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
Score = 22.2 bits (45), Expect = 2.1
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 321 VTIIDAPGHRDFI 359
VT +D PGH FI
Sbjct: 195 VTFLDTPGHAAFI 207
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.51
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 83 INIVVIGHVDSGKST 127
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.0 bits (47), Expect = 1.2
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 75 FSLPIFG*SRITNCV*Y 25
FSLPIFG I +C+ Y
Sbjct: 57 FSLPIFGTRWIFSCIGY 73
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 4.8
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 164 DKRTIEKFEKEAQEMG 211
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 4.8
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 164 DKRTIEKFEKEAQEMG 211
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 4.8
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 164 DKRTIEKFEKEAQEMG 211
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 20.2 bits (40), Expect = 8.3
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3
Query: 264 SRSAFSLSNTQAYLKDPLPISWASFSN 184
+RS F L N +KD L ++ F+N
Sbjct: 78 TRSPFLLLNDPELIKDILIRDFSKFAN 104
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,931
Number of Sequences: 438
Number of extensions: 1862
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 9052365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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