Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28n14
         (477 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC032555-1|AAH32555.1|  823|Homo sapiens neuroligin 1 protein.         30   3.6  
AB028993-1|BAA83022.2|  826|Homo sapiens KIAA1070 protein protein.     30   3.6  
BX641059-1|CAE46030.1|  351|Homo sapiens hypothetical protein pr...    29   6.3  
BC051715-1|AAH51715.1|  828|Homo sapiens neuroligin 3 protein.         29   6.3  
AF217413-2|AAF71232.1|  828|Homo sapiens neuroligin 3 isoform pr...    29   6.3  
AF217411-1|AAF71230.1|  828|Homo sapiens neuroligin 3 isoform HN...    29   6.3  
AF536542-1|AAN77183.1|  916|Homo sapiens SR-related CTD associat...    29   8.3  

>BC032555-1|AAH32555.1|  823|Homo sapiens neuroligin 1 protein.
          Length = 823

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
 Frame = +3

Query: 246 DLGQPQPV--YIHRGNYLSPTGN--TGQIRLNRGEQVLI 350
           D G P+PV  YIH G+Y+  TGN   G +  + G  ++I
Sbjct: 168 DSGGPKPVMVYIHGGSYMEGTGNLYDGSVLASYGNVIVI 206


>AB028993-1|BAA83022.2|  826|Homo sapiens KIAA1070 protein protein.
          Length = 826

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
 Frame = +3

Query: 246 DLGQPQPV--YIHRGNYLSPTGN--TGQIRLNRGEQVLI 350
           D G P+PV  YIH G+Y+  TGN   G +  + G  ++I
Sbjct: 171 DSGGPKPVMVYIHGGSYMEGTGNLYDGSVLASYGNVIVI 209


>BX641059-1|CAE46030.1|  351|Homo sapiens hypothetical protein
           protein.
          Length = 351

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
 Frame = +3

Query: 90  TDLPEPGQLAFVLNEDEFEDYLDAYLALQQSEMLANQTRNDFRSGCTFRVNGDLGQPQPV 269
           T + EP +    LN   +    D   A +Q E LA+   ND       R +G   +P  V
Sbjct: 15  TYIQEPNEDCLYLNV--YVPTEDGSGAKKQGEDLAD---NDGDEDEDIRDSG--AKPVMV 67

Query: 270 YIHRGNYLSPTGN--TGQIRLNRGEQVLI 350
           YIH G+Y+  TGN   G I  + G  ++I
Sbjct: 68  YIHGGSYMEGTGNMIDGSILASYGNVIVI 96


>BC051715-1|AAH51715.1|  828|Homo sapiens neuroligin 3 protein.
          Length = 828

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
 Frame = +3

Query: 90  TDLPEPGQLAFVLNEDEFEDYLDAYLALQQSEMLANQTRNDFRSGCTFRVNGDLGQPQPV 269
           T + EP +    LN   +    D   A +Q E LA+   ND       R +G   +P  V
Sbjct: 132 TYIQEPNEDCLYLNV--YVPTEDGSGAKKQGEDLAD---NDGDEDEDIRDSG--AKPVMV 184

Query: 270 YIHRGNYLSPTGN--TGQIRLNRGEQVLI 350
           YIH G+Y+  TGN   G I  + G  ++I
Sbjct: 185 YIHGGSYMEGTGNMIDGSILASYGNVIVI 213


>AF217413-2|AAF71232.1|  828|Homo sapiens neuroligin 3 isoform
           protein.
          Length = 828

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
 Frame = +3

Query: 90  TDLPEPGQLAFVLNEDEFEDYLDAYLALQQSEMLANQTRNDFRSGCTFRVNGDLGQPQPV 269
           T + EP +    LN   +    D   A +Q E LA+   ND       R +G   +P  V
Sbjct: 132 TYIQEPNEDCLYLNV--YVPTEDGSGAKKQGEDLAD---NDGDEDEDIRDSG--AKPVMV 184

Query: 270 YIHRGNYLSPTGN--TGQIRLNRGEQVLI 350
           YIH G+Y+  TGN   G I  + G  ++I
Sbjct: 185 YIHGGSYMEGTGNMIDGSILASYGNVIVI 213


>AF217411-1|AAF71230.1|  828|Homo sapiens neuroligin 3 isoform HNL3
           protein.
          Length = 828

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
 Frame = +3

Query: 90  TDLPEPGQLAFVLNEDEFEDYLDAYLALQQSEMLANQTRNDFRSGCTFRVNGDLGQPQPV 269
           T + EP +    LN   +    D   A +Q E LA+   ND       R +G   +P  V
Sbjct: 132 TYIQEPNEDCLYLNV--YVPTEDGSGAKKQGEDLAD---NDGDEDEDIRDSG--AKPVMV 184

Query: 270 YIHRGNYLSPTGN--TGQIRLNRGEQVLI 350
           YIH G+Y+  TGN   G I  + G  ++I
Sbjct: 185 YIHGGSYMEGTGNMIDGSIPASYGNVIVI 213


>AF536542-1|AAN77183.1|  916|Homo sapiens SR-related CTD associated
           factor 6 protein.
          Length = 916

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = +2

Query: 5   SAEYTKNASDACSRSISCSGGGTALQTSNGSTRART 112
           S  Y+++ S +CSRS SCS   +  ++ +  +R+R+
Sbjct: 761 SGSYSRSRSRSCSRSSSCSRSRSRSRSRSSRSRSRS 796


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,736,936
Number of Sequences: 237096
Number of extensions: 1450307
Number of successful extensions: 4171
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4171
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4213781852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)