Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28n09
(531 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 97 7e-21
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 97 7e-21
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 96 2e-20
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 96 2e-20
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 94 5e-20
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 92 3e-19
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 75 3e-14
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 75 3e-14
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 73 2e-13
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 71 5e-13
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 69 2e-12
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 65 3e-11
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 61 4e-10
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 61 4e-10
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 60 7e-10
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 56 2e-08
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 55 3e-08
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 54 5e-08
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 53 1e-07
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 53 1e-07
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 50 1e-06
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 46 2e-05
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 41 6e-04
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 36 0.018
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 36 0.024
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 29 2.7
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 29 2.7
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 29 2.7
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL033514-31|CAA22092.1| 444|Caenorhabditis elegans Hypothetical... 28 3.6
Z66567-2|CAA91488.1| 1118|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p... 27 6.3
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr... 27 6.3
AC024206-4|AAK67240.1| 564|Caenorhabditis elegans Hypothetical ... 27 8.4
AC024206-3|AAF36052.1| 561|Caenorhabditis elegans Hypothetical ... 27 8.4
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 97.1 bits (231), Expect = 7e-21
Identities = 43/100 (43%), Positives = 59/100 (59%)
Frame = +2
Query: 230 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 409
+RL ++ +L G+S P +N+ W I GP ET + +KLSLEF YP
Sbjct: 7 RRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNK 66
Query: 410 PPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVL 529
PP VKF++ FHPNV G ICLDIL+++W+ YDV +L
Sbjct: 67 PPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAIL 106
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 97.1 bits (231), Expect = 7e-21
Identities = 43/100 (43%), Positives = 59/100 (59%)
Frame = +2
Query: 230 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 409
+RL ++ +L G+S P +N+ W I GP ET + +KLSLEF YP
Sbjct: 7 RRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNK 66
Query: 410 PPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVL 529
PP VKF++ FHPNV G ICLDIL+++W+ YDV +L
Sbjct: 67 PPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAIL 106
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 95.9 bits (228), Expect = 2e-20
Identities = 44/100 (44%), Positives = 61/100 (61%)
Frame = +2
Query: 230 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 409
KR+QKEL +L R SA P ++LF W TI GP E+ Y G + L++ FP YP+
Sbjct: 4 KRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFK 63
Query: 410 PPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVL 529
PP V F T +HPN+++ G ICLDIL+ +W+ + VL
Sbjct: 64 PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVL 103
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 95.9 bits (228), Expect = 2e-20
Identities = 44/100 (44%), Positives = 61/100 (61%)
Frame = +2
Query: 230 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 409
KR+QKEL +L R SA P ++LF W TI GP E+ Y G + L++ FP YP+
Sbjct: 4 KRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFK 63
Query: 410 PPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVL 529
PP V F T +HPN+++ G ICLDIL+ +W+ + VL
Sbjct: 64 PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVL 103
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 94.3 bits (224), Expect = 5e-20
Identities = 46/100 (46%), Positives = 60/100 (60%)
Frame = +2
Query: 230 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 409
+R+ KE L+ GISA P+ N + I GP ++ +AG +KL L P YP A
Sbjct: 7 RRIIKETQRLLADPVPGISANPDESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMA 66
Query: 410 PPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVL 529
P V+FMT +HPN+D G ICLDILKDKW+ +RTVL
Sbjct: 67 APKVRFMTKIYHPNIDKLGRICLDILKDKWSPALQIRTVL 106
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 91.9 bits (218), Expect = 3e-19
Identities = 48/103 (46%), Positives = 66/103 (64%), Gaps = 4/103 (3%)
Frame = +2
Query: 233 RLQKELMELM---RCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYP 403
RLQ+E E++ S+ GI +ENL + G I GP +T YAG + L ++ P+ YP
Sbjct: 8 RLQRECKEVVTNSEISETGIMIEILNENLTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYP 67
Query: 404 YAPPVVKFMTPCFHPNVDT-CGLICLDILKDKWTALYDVRTVL 529
++PP VKF T +HPNV + G+ICLDILKD+W A +RTVL
Sbjct: 68 FSPPNVKFSTKIWHPNVSSQTGVICLDILKDQWAASLTLRTVL 110
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 74.9 bits (176), Expect = 3e-14
Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = +2
Query: 236 LQKELMELMRCSDKGISA-FPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAP 412
L+K+L ++ R G SA + +++KW + GP +T+Y G +K L+FP YP P
Sbjct: 8 LKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKP 67
Query: 413 PVVKFMTPCFHPNVDTCGLICLDILKD 493
P +KF++ +HPN+D G +C+ IL D
Sbjct: 68 PKMKFISEIWHPNIDKEGNVCISILHD 94
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 74.9 bits (176), Expect = 3e-14
Identities = 36/95 (37%), Positives = 52/95 (54%)
Frame = +2
Query: 203 KLKDNHAVSKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSL 382
K + + L EL L +G + +NLF W I GP +T+Y G +K S+
Sbjct: 4 KASTSSGALRALTMELKNLQSQPVEGFTIDVNEDNLFVWTVGIYGPPKTLYQGGYFKASI 63
Query: 383 EFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDIL 487
FP++YPY+PP +KF T +HPNV G +C+ IL
Sbjct: 64 RFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISIL 98
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 72.5 bits (170), Expect = 2e-13
Identities = 43/112 (38%), Positives = 58/112 (51%), Gaps = 16/112 (14%)
Frame = +2
Query: 242 KELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVV 421
KE+ ++ GI + NL G I GP T YAG +++ ++ P YP+ PP V
Sbjct: 28 KEVANASDITEAGIHVEIKENNLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKV 87
Query: 422 ---------------KFMTPCFHPNVDT-CGLICLDILKDKWTALYDVRTVL 529
KF+T +HPN+ + G ICLDILKDKWTA +RTVL
Sbjct: 88 TEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILKDKWTASLTLRTVL 139
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 70.9 bits (166), Expect = 5e-13
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +2
Query: 230 KRLQKELMELMRCSDKGISAFP-ESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPY 406
KRL E EL +GI A P + +N F+W I GP ET +A + + FP YP
Sbjct: 7 KRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQDYPL 66
Query: 407 APPVVKFMTPCFHPNVDTCGLICLDIL 487
+PP ++F FHPN+ G +C+ IL
Sbjct: 67 SPPKMRFTCGIFHPNIYADGRVCISIL 93
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 68.9 bits (161), Expect = 2e-12
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +2
Query: 314 KWIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVD-TCGLICLDILK 490
++I +GP +T Y +++ ++ P+ YP+ P + F+ FHPN+D G +CLD++
Sbjct: 34 EFIVRFHGPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVIN 93
Query: 491 DKWTALYDVRTV 526
WTALYD+ +
Sbjct: 94 QAWTALYDLTNI 105
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 65.3 bits (152), Expect = 3e-11
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Frame = +2
Query: 221 AVSKRLQKELMELMRCSDKGISAFP-ESENLFKWIGTINGPLETVYAGHKYKLSLEFPNS 397
+ ++RLQKEL +L C K E NL KW + P + Y +K+ + FP
Sbjct: 2 SATRRLQKELGDLKNCGVKAYENVECEETNLLKWTVLLI-PDKEPYNKGAFKVGITFPVD 60
Query: 398 YPYAPPVVKFMTPCFHPNVDTCGLICLDIL-KDKW 499
YP+ PP V F T +HPNVD G CL I+ + W
Sbjct: 61 YPFKPPKVAFETKIYHPNVDEEGKFCLPIVTAENW 95
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 61.3 bits (142), Expect = 4e-10
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 305 NLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDI 484
NLF W I G +T++ G Y++ + F + +P PP KF P FHPNV G +CL +
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 485 LKDK--WTALYDVRTVL 529
L + W ++ +L
Sbjct: 97 LDENKDWKPSISIKQLL 113
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 61.3 bits (142), Expect = 4e-10
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 305 NLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDI 484
NLF W I G +T++ G Y++ + F + +P PP KF P FHPNV G +CL +
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 485 LKDK--WTALYDVRTVL 529
L + W ++ +L
Sbjct: 97 LDENKDWKPSISIKQLL 113
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 60.5 bits (140), Expect = 7e-10
Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Frame = +2
Query: 221 AVSKRLQKELMELMRCSDKG--ISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPN 394
A ++RL KEL +L + +G + S +L +W + G T+YAG + L F
Sbjct: 4 AATRRLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTFGP 63
Query: 395 SYPYAPPVVKFM--TPCFHPNVDTCGLICLDILKDKWTALYDVRTV 526
YP+ P V F+ T HP++ + G ICL IL D WT V++V
Sbjct: 64 QYPFNSPEVMFVGETIPAHPHIYSNGHICLSILSDDWTPALSVQSV 109
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 55.6 bits (128), Expect = 2e-08
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +2
Query: 317 WIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDIL-KD 493
WI T+ GP + + G +Y++S+ F + +P PP+ +F TP HPNVD G I L +L ++
Sbjct: 71 WICTVPGPRGSPWEGGEYEVSVNF-HKWPIIPPICEFKTPLHHPNVDLRGSIYLKMLEQE 129
Query: 494 KWTALYDVRTVL 529
W++ ++ +L
Sbjct: 130 HWSSETSLKKLL 141
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 55.2 bits (127), Expect = 3e-08
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Frame = +2
Query: 230 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 409
+RLQK+ +LM+ GI A P +N+ +W + G +T + G Y + F ++P++
Sbjct: 22 RRLQKDYAKLMQDPVDGIKALPNEDNILEWHYCLRGSPDTPFYGGYYWGKVIFKENFPWS 81
Query: 410 PPVVKFMTP--CFHPNVDTCGLICLDILKDKWTALYDVRTVL 529
PP + +TP F N C L D + W + V +L
Sbjct: 82 PPAITMITPNGRFQTNTRLC-LSISDYHPESWNPGWTVSAIL 122
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 54.4 bits (125), Expect = 5e-08
Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = +2
Query: 230 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 409
+RL KE MEL + ++ A P +NLF+W TI G L T + G Y + FP YP
Sbjct: 13 RRLMKEAMELRQPTEM-YHAQPMEDNLFEWHFTIRGTLGTDFEGGIYHGRIIFPADYPMK 71
Query: 410 PPVVKFMTP--CFHPNVDTCGLICLDILKDKWTALYDVRTVL 529
PP + +TP F N C L + W + +RT L
Sbjct: 72 PPNLILLTPNGRFELNKKVC-LSISGYHPETWLPSWSIRTAL 112
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = +2
Query: 338 PLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDILK 490
P E +Y G K++ + P Y PPVVK +T +HPN++ G ICL IL+
Sbjct: 67 PQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILR 117
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 52.8 bits (121), Expect = 1e-07
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +2
Query: 230 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 409
+RL+K+ L++ + A P N+ +W I G +T Y G Y L FP +P+
Sbjct: 11 QRLKKDYQRLLKEPVPFMKAAPLETNILEWRYIIIGAPKTPYEGGIYMGKLLFPKDFPFK 70
Query: 410 PPVVKFMTP--CFHPNVDTCGLICLDILKDKWTALYDVRTVL 529
PP + +TP F N C L D D W + V T++
Sbjct: 71 PPAILMLTPNGRFQTNTRLC-LSISDYHPDTWNPAWTVSTII 111
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 49.6 bits (113), Expect = 1e-06
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +2
Query: 323 GTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTC-GLICL-DILKDK 496
G I G ET Y G ++L ++ SYP+ P VKF+T +HP+V G ICL D+
Sbjct: 383 GIIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNGV 442
Query: 497 WTALYDVRTVL 529
W + VL
Sbjct: 443 WPVSMTIYKVL 453
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = +2
Query: 329 INGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTP-----CFHPNVDTCGLICLDIL 487
I+GP +T YA ++ + FP YP++PP F+T F+PN+ G ICL IL
Sbjct: 449 ISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSIL 506
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 44.8 bits (101), Expect = 4e-05
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Frame = +2
Query: 233 RLQKELMELMRCSDKGISAFPESENL-----FKWIGTINGPLETVYAGHKYKLSLEFPNS 397
R++KE+ +L + + I F + E FK IG +G L Y + L+L+
Sbjct: 17 RIRKEIADLAKNKRRFIKDFRKIEKCKDIFQFKIIG--DGVL---YKNMIFTLTLDVNVE 71
Query: 398 YPYAPPVVKFMTPCFHPNVD--TCGLICLDILKDKW 499
YP+ PP +KF +HPNVD TC L +L++ W
Sbjct: 72 YPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQENW 107
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 40.7 bits (91), Expect = 6e-04
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +2
Query: 308 LFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVD-TCGLI---C 475
L +W +I GP T Y Y L ++ +YP PP V+F T V+ + G+I
Sbjct: 38 LTRWTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQSNGVIDKRN 97
Query: 476 LDILKDKWTALYDVRTVL 529
L L++ W+ Y ++TVL
Sbjct: 98 LTTLRN-WSNSYMIKTVL 114
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 35.9 bits (79), Expect = 0.018
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 329 INGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMT 433
I GP +T Y +++ L FP++YP A P +KF T
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKFQT 69
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 35.5 bits (78), Expect = 0.024
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +2
Query: 230 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSL 382
KR+QKEL +L R S ++L+ W TI GP E+ Y G + L++
Sbjct: 4 KRIQKELHDLGRDPPAQCSTGSVGDDLYHWQATIMGPPESPYQGGIFFLTI 54
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 441 KHGVINLTTGGAYGYEFGNSS 379
K G T GG+YGY +GNSS
Sbjct: 198 KTGDTGKTPGGSYGYGYGNSS 218
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 441 KHGVINLTTGGAYGYEFGNSS 379
K G T GG+YGY +GNSS
Sbjct: 208 KTGDTGKTPGGSYGYGYGNSS 228
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 441 KHGVINLTTGGAYGYEFGNSS 379
K G T GG+YGY +GNSS
Sbjct: 311 KTGDTGKTPGGSYGYGYGNSS 331
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 441 KHGVINLTTGGAYGYEFGNSS 379
K G T GG+YGY +GNSS
Sbjct: 279 KTGDTGKTPGGSYGYGYGNSS 299
>AL033514-31|CAA22092.1| 444|Caenorhabditis elegans Hypothetical
protein Y75B8A.32 protein.
Length = 444
Score = 28.3 bits (60), Expect = 3.6
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 354 TQATNTNYHLNFQIHTRTHHLLSN 425
T+ T+T HL+ Q+H H++++N
Sbjct: 171 TEITSTPVHLSMQVHQAPHNMMNN 194
>Z66567-2|CAA91488.1| 1118|Caenorhabditis elegans Hypothetical
protein ZK455.2 protein.
Length = 1118
Score = 27.5 bits (58), Expect = 6.3
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +2
Query: 278 GISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVD 457
GIS ++E + W+ G LE + + KL F S +A VVK + +
Sbjct: 616 GISFNQQNEFIVMWVLCSRGSLEDILFNDELKLGRNFQVS--FAKDVVKGLNFLHTSPLL 673
Query: 458 TCGLICLD--ILKDKWT 502
G++CL ++ WT
Sbjct: 674 HHGMLCLQNCLVDSNWT 690
>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 128 NIMAQNINPHYASSSNPAKQSEDTIKLKDNHAVSKRLQKELMEL 259
N++A ++ A SS + I ++N A+ KRL+K ME+
Sbjct: 988 NLVALSVKDEVALSSGSEVEPLSDIDSEENLAIIKRLEKREMEI 1031
>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical protein
C28A5.6 protein.
Length = 1061
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 128 NIMAQNINPHYASSSNPAKQSEDTIKLKDNHAVSKRLQKELMEL 259
N++A ++ A SS + I ++N A+ KRL+K ME+
Sbjct: 988 NLVALSVKDEVALSSGSEVEPLSDIDSEENLAIIKRLEKREMEI 1031
>AC024206-4|AAK67240.1| 564|Caenorhabditis elegans Hypothetical
protein Y74C9A.4b protein.
Length = 564
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +2
Query: 155 HYASSSNPAKQSEDTIKLKDNHAVSKRLQKELMELMRCSDKGISAFPESEN 307
H S SNP ++ I + + + E +E C D+ I AFP+ N
Sbjct: 96 HDTSFSNPLSNVDNLIHVGTEYQAIIQPTAEQLEKEPCRDQQIWAFPDEMN 146
>AC024206-3|AAF36052.1| 561|Caenorhabditis elegans Hypothetical
protein Y74C9A.4a protein.
Length = 561
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +2
Query: 155 HYASSSNPAKQSEDTIKLKDNHAVSKRLQKELMELMRCSDKGISAFPESEN 307
H S SNP ++ I + + + E +E C D+ I AFP+ N
Sbjct: 93 HDTSFSNPLSNVDNLIHVGTEYQAIIQPTAEQLEKEPCRDQQIWAFPDEMN 143
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,087,122
Number of Sequences: 27780
Number of extensions: 248413
Number of successful extensions: 715
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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