Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28n07
(639 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001819-1|AAN71574.1| 153|Drosophila melanogaster RH41321p pro... 47 2e-05
AJ132818-1|CAB52584.1| 153|Drosophila melanogaster globin protein. 47 2e-05
AE014297-2106|AAN13680.1| 153|Drosophila melanogaster CG9734-PD... 47 2e-05
AE014297-2105|AAN13679.1| 153|Drosophila melanogaster CG9734-PC... 47 2e-05
AE014297-2104|AAF55247.1| 153|Drosophila melanogaster CG9734-PB... 47 2e-05
AE014297-2103|AAF55246.1| 153|Drosophila melanogaster CG9734-PA... 47 2e-05
AY069075-1|AAL39220.1| 67|Drosophila melanogaster GH09296p pro... 32 0.75
BT015274-1|AAT94503.1| 537|Drosophila melanogaster LD17709p pro... 29 4.0
AE014296-1672|AAF50256.3| 2351|Drosophila melanogaster CG3654-PD... 29 4.0
AY095524-1|AAM12255.1| 1258|Drosophila melanogaster LD41783p pro... 29 7.0
AE014134-3368|AAF53983.2| 2759|Drosophila melanogaster CG8677-PA... 29 7.0
>BT001819-1|AAN71574.1| 153|Drosophila melanogaster RH41321p
protein.
Length = 153
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Frame = +1
Query: 349 EIHAVQKSWAPVNANSFATGSELLRRLFNTYPDTKEYFKMVRKLPEEEYSQNPQFKAHVI 528
E+ ++K+W A +G+ +L + FN +P E F R +P EE S N +F+AH
Sbjct: 5 EVQLIKKTWEIPVATPTDSGAAILTQFFNRFPSNLEKFPF-RDVPLEELSGNARFRAHAG 63
Query: 529 NLMTSLNLAVNNLNQP---EIVAAMMTKLGESHRRRQIKE 639
++ + ++ L Q E + + TK+ SH R + +
Sbjct: 64 RIIRVFDESIQVLGQDGDLEKLDEIWTKIAVSHIPRTVSK 103
>AJ132818-1|CAB52584.1| 153|Drosophila melanogaster globin protein.
Length = 153
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Frame = +1
Query: 349 EIHAVQKSWAPVNANSFATGSELLRRLFNTYPDTKEYFKMVRKLPEEEYSQNPQFKAHVI 528
E+ ++K+W A +G+ +L + FN +P E F R +P EE S N +F+AH
Sbjct: 5 EVQLIKKTWEIPVATPTDSGAAILTQFFNRFPSNLEKFPF-RDVPLEELSGNARFRAHAG 63
Query: 529 NLMTSLNLAVNNLNQP---EIVAAMMTKLGESHRRRQIKE 639
++ + ++ L Q E + + TK+ SH R + +
Sbjct: 64 RIIRVFDESIQVLGQDGDLEKLDEIWTKIAVSHIPRTVSK 103
>AE014297-2106|AAN13680.1| 153|Drosophila melanogaster CG9734-PD,
isoform D protein.
Length = 153
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Frame = +1
Query: 349 EIHAVQKSWAPVNANSFATGSELLRRLFNTYPDTKEYFKMVRKLPEEEYSQNPQFKAHVI 528
E+ ++K+W A +G+ +L + FN +P E F R +P EE S N +F+AH
Sbjct: 5 EVQLIKKTWEIPVATPTDSGAAILTQFFNRFPSNLEKFPF-RDVPLEELSGNARFRAHAG 63
Query: 529 NLMTSLNLAVNNLNQP---EIVAAMMTKLGESHRRRQIKE 639
++ + ++ L Q E + + TK+ SH R + +
Sbjct: 64 RIIRVFDESIQVLGQDGDLEKLDEIWTKIAVSHIPRTVSK 103
>AE014297-2105|AAN13679.1| 153|Drosophila melanogaster CG9734-PC,
isoform C protein.
Length = 153
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Frame = +1
Query: 349 EIHAVQKSWAPVNANSFATGSELLRRLFNTYPDTKEYFKMVRKLPEEEYSQNPQFKAHVI 528
E+ ++K+W A +G+ +L + FN +P E F R +P EE S N +F+AH
Sbjct: 5 EVQLIKKTWEIPVATPTDSGAAILTQFFNRFPSNLEKFPF-RDVPLEELSGNARFRAHAG 63
Query: 529 NLMTSLNLAVNNLNQP---EIVAAMMTKLGESHRRRQIKE 639
++ + ++ L Q E + + TK+ SH R + +
Sbjct: 64 RIIRVFDESIQVLGQDGDLEKLDEIWTKIAVSHIPRTVSK 103
>AE014297-2104|AAF55247.1| 153|Drosophila melanogaster CG9734-PB,
isoform B protein.
Length = 153
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Frame = +1
Query: 349 EIHAVQKSWAPVNANSFATGSELLRRLFNTYPDTKEYFKMVRKLPEEEYSQNPQFKAHVI 528
E+ ++K+W A +G+ +L + FN +P E F R +P EE S N +F+AH
Sbjct: 5 EVQLIKKTWEIPVATPTDSGAAILTQFFNRFPSNLEKFPF-RDVPLEELSGNARFRAHAG 63
Query: 529 NLMTSLNLAVNNLNQP---EIVAAMMTKLGESHRRRQIKE 639
++ + ++ L Q E + + TK+ SH R + +
Sbjct: 64 RIIRVFDESIQVLGQDGDLEKLDEIWTKIAVSHIPRTVSK 103
>AE014297-2103|AAF55246.1| 153|Drosophila melanogaster CG9734-PA,
isoform A protein.
Length = 153
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Frame = +1
Query: 349 EIHAVQKSWAPVNANSFATGSELLRRLFNTYPDTKEYFKMVRKLPEEEYSQNPQFKAHVI 528
E+ ++K+W A +G+ +L + FN +P E F R +P EE S N +F+AH
Sbjct: 5 EVQLIKKTWEIPVATPTDSGAAILTQFFNRFPSNLEKFPF-RDVPLEELSGNARFRAHAG 63
Query: 529 NLMTSLNLAVNNLNQP---EIVAAMMTKLGESHRRRQIKE 639
++ + ++ L Q E + + TK+ SH R + +
Sbjct: 64 RIIRVFDESIQVLGQDGDLEKLDEIWTKIAVSHIPRTVSK 103
>AY069075-1|AAL39220.1| 67|Drosophila melanogaster GH09296p
protein.
Length = 67
Score = 31.9 bits (69), Expect = 0.75
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 349 EIHAVQKSWAPVNANSFATGSELLRRLFNTYPDTKEYFKMVRKLPEEEYS 498
E+ ++K+W A +G+ +L + FN +P E F R +P EE S
Sbjct: 5 EVQLIKKTWEIPVATPTDSGAAILTQFFNRFPSNLEKFPF-RDVPLEELS 53
>BT015274-1|AAT94503.1| 537|Drosophila melanogaster LD17709p
protein.
Length = 537
Score = 29.5 bits (63), Expect = 4.0
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = -1
Query: 408 AGCKRVGVDGGP*FLNCVYLSPREPGDRVHHVRIPTPPHVAKPGAHD 268
A KRV P F+ S R R + PPH +PGAHD
Sbjct: 349 APVKRVRQRESPIFIPSPESSGRMTRQRAFFEPVKVPPHKEEPGAHD 395
>AE014296-1672|AAF50256.3| 2351|Drosophila melanogaster CG3654-PD
protein.
Length = 2351
Score = 29.5 bits (63), Expect = 4.0
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = -1
Query: 408 AGCKRVGVDGGP*FLNCVYLSPREPGDRVHHVRIPTPPHVAKPGAHD 268
A KRV P F+ S R R + PPH +PGAHD
Sbjct: 349 APVKRVRQRESPIFIPSPESSGRMTRQRAFFEPVKVPPHKEEPGAHD 395
>AY095524-1|AAM12255.1| 1258|Drosophila melanogaster LD41783p
protein.
Length = 1258
Score = 28.7 bits (61), Expect = 7.0
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Frame = +1
Query: 340 TRREIHAVQKSWAPVNANSFATGSEL-----LRRLFNTYPDTKEYFKMVRKLPEEEYSQN 504
TR+ +H +KSW + F G + + R K ++ R+L E ++ +N
Sbjct: 93 TRKTVH--EKSWESA-LSKFCFGYSVQDAWEIERFGYRNSSLKVKLRIFRELLESQFERN 149
Query: 505 PQFKAHVINL 534
+F+AH++ L
Sbjct: 150 AKFRAHILTL 159
>AE014134-3368|AAF53983.2| 2759|Drosophila melanogaster CG8677-PA
protein.
Length = 2759
Score = 28.7 bits (61), Expect = 7.0
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Frame = +1
Query: 340 TRREIHAVQKSWAPVNANSFATGSEL-----LRRLFNTYPDTKEYFKMVRKLPEEEYSQN 504
TR+ +H +KSW + F G + + R K ++ R+L E ++ +N
Sbjct: 93 TRKTVH--EKSWESA-LSKFCFGYSVQDAWEIERFGYRNSSLKVKLRIFRELLESQFERN 149
Query: 505 PQFKAHVINL 534
+F+AH++ L
Sbjct: 150 AKFRAHILTL 159
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,789,072
Number of Sequences: 53049
Number of extensions: 601573
Number of successful extensions: 1534
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1534
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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