Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28m22
         (453 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075459-1|AAL68272.1|  417|Drosophila melanogaster RE15159p pro...   130   1e-30
AE014134-2956|AAF53688.2|  417|Drosophila melanogaster CG31751-P...   128   3e-30
AE014134-2955|AAF53686.2|  417|Drosophila melanogaster CG31751-P...   128   3e-30
AY119188-1|AAM51048.1|  332|Drosophila melanogaster SD11293p pro...    29   3.9  
AF247499-1|AAF63387.1|  332|Drosophila melanogaster replication ...    29   3.9  
AE014296-2310|AAF49795.2| 3843|Drosophila melanogaster CG7002-PA...    29   3.9  
AE014134-1878|AAF52944.2|  332|Drosophila melanogaster CG5313-PA...    29   3.9  
AB035891-1|BAA88518.1| 3843|Drosophila melanogaster hemolectin p...    29   3.9  
BT022174-1|AAY51568.1|  376|Drosophila melanogaster IP01280p pro...    28   6.8  
AL024485-2|CAA19675.1|  376|Drosophila melanogaster EG:155E2.2,F...    28   6.8  
AE014298-438|AAF45802.1|  376|Drosophila melanogaster CG2655-PA ...    28   6.8  

>AY075459-1|AAL68272.1|  417|Drosophila melanogaster RE15159p
           protein.
          Length = 417

 Score =  130 bits (313), Expect = 1e-30
 Identities = 57/116 (49%), Positives = 82/116 (70%)
 Frame = +3

Query: 99  LLEPGQVIRPIIDHEQVKLLAERLYGISVLDLTELNGYDDKNYKLTEDPNMKNPLITNHS 278
           LL+PG  +RP ++ E VK L  RLYGI++ ++ E+  YDD+N+ + ED N+KNPLI  H 
Sbjct: 55  LLKPGSDVRPKVEPEDVKSLLRRLYGITISEVKEIVAYDDRNFFVKEDSNVKNPLIVTHC 114

Query: 279 PYGYVLKIMNSIDSQNVGVVEAQNEIMNFLATRSVTCPKPVRNIFGHLHSIEDLGG 446
           P+GYVLKI+NS+DS+    V+AQN+++ +L   SV CP+PV N  G  +S+E L G
Sbjct: 115 PHGYVLKILNSLDSKKEDFVDAQNQMLLYLGKHSVKCPRPVANATGKYYSVERLNG 170


>AE014134-2956|AAF53688.2|  417|Drosophila melanogaster CG31751-PB,
           isoform B protein.
          Length = 417

 Score =  128 bits (309), Expect = 3e-30
 Identities = 56/116 (48%), Positives = 82/116 (70%)
 Frame = +3

Query: 99  LLEPGQVIRPIIDHEQVKLLAERLYGISVLDLTELNGYDDKNYKLTEDPNMKNPLITNHS 278
           LL+PG  +RP ++ E V+ L  RLYGI++ ++ E+  YDD+N+ + ED N+KNPLI  H 
Sbjct: 55  LLKPGSDVRPKVEPEDVESLLRRLYGITISEVKEIVAYDDRNFFVKEDSNVKNPLIVTHC 114

Query: 279 PYGYVLKIMNSIDSQNVGVVEAQNEIMNFLATRSVTCPKPVRNIFGHLHSIEDLGG 446
           P+GYVLKI+NS+DS+    V+AQN+++ +L   SV CP+PV N  G  +S+E L G
Sbjct: 115 PHGYVLKILNSLDSKKEDFVDAQNQMLLYLGKHSVKCPRPVANATGKYYSVERLNG 170


>AE014134-2955|AAF53686.2|  417|Drosophila melanogaster CG31751-PA,
           isoform A protein.
          Length = 417

 Score =  128 bits (309), Expect = 3e-30
 Identities = 56/116 (48%), Positives = 82/116 (70%)
 Frame = +3

Query: 99  LLEPGQVIRPIIDHEQVKLLAERLYGISVLDLTELNGYDDKNYKLTEDPNMKNPLITNHS 278
           LL+PG  +RP ++ E V+ L  RLYGI++ ++ E+  YDD+N+ + ED N+KNPLI  H 
Sbjct: 55  LLKPGSDVRPKVEPEDVESLLRRLYGITISEVKEIVAYDDRNFFVKEDSNVKNPLIVTHC 114

Query: 279 PYGYVLKIMNSIDSQNVGVVEAQNEIMNFLATRSVTCPKPVRNIFGHLHSIEDLGG 446
           P+GYVLKI+NS+DS+    V+AQN+++ +L   SV CP+PV N  G  +S+E L G
Sbjct: 115 PHGYVLKILNSLDSKKEDFVDAQNQMLLYLGKHSVKCPRPVANATGKYYSVERLNG 170


>AY119188-1|AAM51048.1|  332|Drosophila melanogaster SD11293p
           protein.
          Length = 332

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = +3

Query: 303 MNSIDSQNVGVVEAQNEIMNFLATRSVTC 389
           +N+ D + +G+V  Q  I+NF +TR++ C
Sbjct: 81  LNASDDRGIGIVRGQ--ILNFASTRTIFC 107


>AF247499-1|AAF63387.1|  332|Drosophila melanogaster replication
           factor C subunit 3 protein.
          Length = 332

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = +3

Query: 303 MNSIDSQNVGVVEAQNEIMNFLATRSVTC 389
           +N+ D + +G+V  Q  I+NF +TR++ C
Sbjct: 81  LNASDDRGIGIVRGQ--ILNFASTRTIFC 107


>AE014296-2310|AAF49795.2| 3843|Drosophila melanogaster CG7002-PA
           protein.
          Length = 3843

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +3

Query: 288 YVLKIMN-SIDSQNVGVVEAQNEIMNFLATRSVTCPKPV 401
           ++LK  N S++++NV    A +E MNF A    +C K V
Sbjct: 876 HLLKTQNTSVEAENVACSGAVSESMNFAAPDDPSCTKAV 914


>AE014134-1878|AAF52944.2|  332|Drosophila melanogaster CG5313-PA
           protein.
          Length = 332

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = +3

Query: 303 MNSIDSQNVGVVEAQNEIMNFLATRSVTC 389
           +N+ D + +G+V  Q  I+NF +TR++ C
Sbjct: 81  LNASDDRGIGIVRGQ--ILNFASTRTIFC 107


>AB035891-1|BAA88518.1| 3843|Drosophila melanogaster hemolectin
           protein.
          Length = 3843

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +3

Query: 288 YVLKIMN-SIDSQNVGVVEAQNEIMNFLATRSVTCPKPV 401
           ++LK  N S++++NV    A +E MNF A    +C K V
Sbjct: 876 HLLKTQNTSVEAENVACSGAVSESMNFAAPDDPSCTKAV 914


>BT022174-1|AAY51568.1|  376|Drosophila melanogaster IP01280p
           protein.
          Length = 376

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +2

Query: 83  D*REATTGAGAGYPSDNR-PRAGEATGRASLRDIRAG 190
           D R   +   +G+   N  PR+G   G  S+RD  AG
Sbjct: 15  DERSTASSGSSGHSQTNESPRSGHLNGNGSMRDTAAG 51


>AL024485-2|CAA19675.1|  376|Drosophila melanogaster
           EG:155E2.2,FBgn0011276;HLH3B protein.
          Length = 376

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +2

Query: 83  D*REATTGAGAGYPSDNR-PRAGEATGRASLRDIRAG 190
           D R   +   +G+   N  PR+G   G  S+RD  AG
Sbjct: 15  DERSTASSGSSGHSQTNESPRSGHLNGNGSMRDTAAG 51


>AE014298-438|AAF45802.1|  376|Drosophila melanogaster CG2655-PA
           protein.
          Length = 376

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +2

Query: 83  D*REATTGAGAGYPSDNR-PRAGEATGRASLRDIRAG 190
           D R   +   +G+   N  PR+G   G  S+RD  AG
Sbjct: 15  DERSTASSGSSGHSQTNESPRSGHLNGNGSMRDTAAG 51


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,408,522
Number of Sequences: 53049
Number of extensions: 329938
Number of successful extensions: 1086
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1476622287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)