Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28m21
(288 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_02_0011 - 8513471-8513673,8513815-8513869 29 0.80
09_04_0350 + 16899076-16900164 28 1.4
11_01_0346 - 2589111-2589220,2589613-2589852,2589956-2590028,259... 27 1.8
05_04_0354 - 20545574-20545627,20546430-20546754,20547219-20547802 27 1.8
03_05_0049 - 20277234-20277251,20277670-20277795,20278085-202781... 27 2.4
01_06_1227 + 35531840-35532516,35532665-35532836,35533158-355333... 27 2.4
11_03_0107 + 10084234-10084348,10084830-10084834,10085351-100858... 27 3.2
05_04_0258 + 19490256-19491569 27 3.2
08_02_0337 - 15903990-15904249,15904318-15904441 26 4.2
07_03_0388 + 17550034-17550267 26 4.2
07_01_1078 - 9707125-9707640,9708091-9708306,9708312-9709685,970... 26 5.6
05_01_0493 + 4113869-4116728,4116859-4117370 26 5.6
04_04_0069 + 22506885-22508354 26 5.6
12_02_1095 - 26036283-26036481,26036582-26036772,26037069-260381... 25 7.4
12_02_0629 - 21360831-21361310,21361391-21361663,21362212-213624... 25 7.4
10_03_0046 + 7357777-7357992 25 7.4
07_03_0730 + 21030123-21030338 25 7.4
04_03_0800 - 19820886-19821421,19822476-19822563,19822871-19822888 25 7.4
04_01_0085 - 932461-932464,932656-933002,933387-935041,935084-93... 25 7.4
04_01_0084 - 912255-912368,912738-912822,914050-917105,920290-92... 25 7.4
01_06_1064 + 34237919-34238155 25 7.4
01_02_0075 + 10873789-10873871,10873883-10874420 25 7.4
11_01_0404 + 3071412-3071464,3073572-3074970 25 9.8
06_03_1430 + 30103886-30103946,30104123-30104319 25 9.8
05_02_0110 + 6702828-6703065,6703145-6703351,6703536-6703684,670... 25 9.8
02_01_0485 + 3487578-3487635,3488281-3488399,3488600-3488698,348... 25 9.8
>04_02_0011 - 8513471-8513673,8513815-8513869
Length = 85
Score = 28.7 bits (61), Expect = 0.80
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 115 APCTTIGSTCLDCTTKQVCTKVGGIQRACLDPT-LPYCNLGECSATP 252
AP T + C+D T K +C+ + C L YCN C+ +P
Sbjct: 33 APITEVPKPCVDATCKAICSDKYQSKGECFSTDGLYYCNF--CANSP 77
>09_04_0350 + 16899076-16900164
Length = 362
Score = 27.9 bits (59), Expect = 1.4
Identities = 21/41 (51%), Positives = 22/41 (53%)
Frame = -1
Query: 123 ARSPLRVPGSGCDPWRYPRVDCAIVPASPTAGTTGGRLRDS 1
AR P V SG + WR R D A AS TAG GGR R S
Sbjct: 71 ARRPWLV-SSGAEAWRR-RGDAASA-ASATAGGAGGRSRRS 108
>11_01_0346 - 2589111-2589220,2589613-2589852,2589956-2590028,
2590301-2590606,2590698-2590912,2591461-2591755,
2591901-2592065,2592142-2592738,2593029-2593115,
2593203-2593523,2594047-2596071
Length = 1477
Score = 27.5 bits (58), Expect = 1.8
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2
Query: 161 LVVQSRQVLPMVVQGAHCGYQGADAIHGGIQGLT 60
L ++ RQ P+V+ G C ++G D I GI G T
Sbjct: 1234 LKIKYRQDAPLVLHGITCTFEGGDKI--GIVGRT 1265
>05_04_0354 - 20545574-20545627,20546430-20546754,20547219-20547802
Length = 320
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 120 RSPLRVPGSGCDPWRYPRVDCAIVPASPTAG 28
R P ++P P+ +PR D A+ P+SP G
Sbjct: 40 RQPAKIPA----PFVWPRADVALPPSSPPTG 66
>03_05_0049 -
20277234-20277251,20277670-20277795,20278085-20278153,
20278233-20278280,20278413-20278494,20278583-20278662,
20278764-20278835,20278912-20279006,20280396-20280477,
20280604-20280963
Length = 343
Score = 27.1 bits (57), Expect = 2.4
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 2 LSLNLPPVVPAVGEAGTMAQSTLGYLHGSHPLPGTRSGLLAPPSV 136
L+++ P VP A MA + GY LPG+ GL A S+
Sbjct: 36 LNVHAPEFVPRSPAASPMAAAAAGYYSPFLQLPGSSIGLGADWSI 80
>01_06_1227 +
35531840-35532516,35532665-35532836,35533158-35533357,
35533467-35533622,35536878-35537235,35537407-35537418
Length = 524
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 12 TCHRWCRRLGRLEQWRSQPLDTSMDR 89
TC R RR ++WR QP D SM R
Sbjct: 201 TCMRNGRRDDTYQKWRWQPKDCSMPR 226
>11_03_0107 +
10084234-10084348,10084830-10084834,10085351-10085803,
10086143-10086267,10087282-10087345,10087452-10087508,
10088475-10088485,10089923-10090802
Length = 569
Score = 26.6 bits (56), Expect = 3.2
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +1
Query: 151 CTTKQVCTKVGGIQRA--CLDPTL--PYCNLGECSATPAEGCEPASGASV 288
C+T + T +G I A P+L P CN +A + CEP GA++
Sbjct: 31 CSTVEQATGLGYIVLALQAYTPSLHPPPCNPAATTAAASTTCEPVRGANL 80
>05_04_0258 + 19490256-19491569
Length = 437
Score = 26.6 bits (56), Expect = 3.2
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Frame = +1
Query: 112 WAPCTT--IGSTC--LDCTTKQV-CTKVGGIQRACLDPTLPYCNLGECSATP 252
W C T + S+ + C +K TK GG +C P C G CS P
Sbjct: 73 WVDCDTGYVSSSYARVPCGSKPCRLTKTGGCFNSCFGAPSPACLNGTCSGFP 124
>08_02_0337 - 15903990-15904249,15904318-15904441
Length = 127
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 232 RGCSKEESGPDTPSVYLL 179
RGC +EE G ++PS+ LL
Sbjct: 108 RGCMREEPGGNSPSLVLL 125
>07_03_0388 + 17550034-17550267
Length = 77
Score = 26.2 bits (55), Expect = 4.2
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -3
Query: 133 RWWCKEPTAGT--RERMRSMEVSKG*LRHCSSLPNRRHHRWQVEG 5
RW + AG+ RER + EVS+ R ++ P R H R + G
Sbjct: 11 RWRLGQVDAGSEGRERQQCGEVSRPGYRRVATAPLRCHRRESLSG 55
>07_01_1078 -
9707125-9707640,9708091-9708306,9708312-9709685,
9709704-9710044,9710120-9710198
Length = 841
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/55 (23%), Positives = 24/55 (43%)
Frame = +1
Query: 118 PCTTIGSTCLDCTTKQVCTKVGGIQRACLDPTLPYCNLGECSATPAEGCEPASGA 282
P ++ +D T +C + G + P + +C++ + A P E SGA
Sbjct: 563 PFLSLAGGNIDVGTGSICFHING--KFEFQPRMEHCSMNQVRAKPVEYSRVRSGA 615
>05_01_0493 + 4113869-4116728,4116859-4117370
Length = 1123
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 194 GRVWTRLFLTATSENAPLPPLKDVNRPLVHL 286
GR TRL LT + P+PP L HL
Sbjct: 98 GRTLTRLVLTGANLTGPIPPELGELPALAHL 128
>04_04_0069 + 22506885-22508354
Length = 489
Score = 25.8 bits (54), Expect = 5.6
Identities = 21/41 (51%), Positives = 22/41 (53%)
Frame = -1
Query: 123 ARSPLRVPGSGCDPWRYPRVDCAIVPASPTAGTTGGRLRDS 1
AR P V G G + R R D A PAS TAG GGR R S
Sbjct: 82 ARRPWLV-GGGAEASRR-RGDAAS-PASATAGGAGGRSRRS 119
>12_02_1095 -
26036283-26036481,26036582-26036772,26037069-26038198,
26038275-26038431,26038595-26038670,26038744-26038866,
26038950-26039114,26039208-26039298,26039622-26039706,
26039793-26039948,26040045-26040101,26040179-26040277,
26040523-26040635,26041022-26041079
Length = 899
Score = 25.4 bits (53), Expect = 7.4
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -1
Query: 111 LRVPGSGCDPWRYPRVDCAIVPASP 37
L G G PW PR+D ++ P
Sbjct: 419 LNFQGHGVSPWLQPRIDSPLLGLKP 443
>12_02_0629 -
21360831-21361310,21361391-21361663,21362212-21362488,
21362590-21362735,21363207-21363416
Length = 461
Score = 25.4 bits (53), Expect = 7.4
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 281 APEAGSHPSAGVA-EHSPRLQ*GRVGSRHALCIPP 180
AP + +AGVA H PR R+ RH +PP
Sbjct: 35 APGLDAVAAAGVAGAHGPRRAGARLRERHGAPLPP 69
>10_03_0046 + 7357777-7357992
Length = 71
Score = 25.4 bits (53), Expect = 7.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 133 RWWCKEPTAGTRERMRSMEV 74
RWWC+ + + ER+ EV
Sbjct: 31 RWWCRPASGRSTERVSGREV 50
>07_03_0730 + 21030123-21030338
Length = 71
Score = 25.4 bits (53), Expect = 7.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 133 RWWCKEPTAGTRERMRSMEV 74
RWWC+ + + ER+ EV
Sbjct: 31 RWWCRPASGRSTERVSGREV 50
>04_03_0800 - 19820886-19821421,19822476-19822563,19822871-19822888
Length = 213
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +1
Query: 169 CTKVGGIQRACLDPTLPYCNLGECSATPAEGC 264
CT GG C P +P C G CS + C
Sbjct: 137 CTYCGGHGGGCNKPAVPPC-AGGCSISDGGAC 167
>04_01_0085 -
932461-932464,932656-933002,933387-935041,935084-935882,
936693-936707
Length = 939
Score = 25.4 bits (53), Expect = 7.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 126 GARSPLRVPGSGCDPWRYPRVDC 58
G S R+P G D R P+VDC
Sbjct: 876 GCWSLTRLPAVGLDSTRKPKVDC 898
>04_01_0084 - 912255-912368,912738-912822,914050-917105,920290-920508
Length = 1157
Score = 25.4 bits (53), Expect = 7.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 126 GARSPLRVPGSGCDPWRYPRVDC 58
G S R+P G D R P+VDC
Sbjct: 1029 GCWSLTRLPAVGLDSTRKPKVDC 1051
>01_06_1064 + 34237919-34238155
Length = 78
Score = 25.4 bits (53), Expect = 7.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 133 RWWCKEPTAGTRERMRSMEV 74
RWWC+ + + ER+ EV
Sbjct: 31 RWWCRPASGRSTERVSGREV 50
>01_02_0075 + 10873789-10873871,10873883-10874420
Length = 206
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 132 DGGARSPLRVPGSGCDPWRYPRVDCA 55
DGG R V +G D WR P D A
Sbjct: 10 DGGRRRLSGVEAAGSDGWRRPLPDLA 35
>11_01_0404 + 3071412-3071464,3073572-3074970
Length = 483
Score = 25.0 bits (52), Expect = 9.8
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 283 MHQRPVHILQRG*RSILRGCSKEESGPDTP 194
MH+R H++ G + CS + SG P
Sbjct: 353 MHKRMWHVVDHGDVGFVTSCSNDGSGRSDP 382
>06_03_1430 + 30103886-30103946,30104123-30104319
Length = 85
Score = 25.0 bits (52), Expect = 9.8
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -1
Query: 168 NLLGSAI*ASTTDGGARSPLRVPGSGCDPWRYPRVDCAIVPASPTAGTTGG 16
N ++ T+ G ARS ++ P PR C+ +P+AG+ G
Sbjct: 8 NAASGSVRGYTSAGCARSITQLREPYVPPDHQPRPSCSEAQRAPSAGSISG 58
>05_02_0110 +
6702828-6703065,6703145-6703351,6703536-6703684,
6704096-6704369,6706011-6706228
Length = 361
Score = 25.0 bits (52), Expect = 9.8
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 54 WRSQPLDTSMDRIRSLVPAV 113
W + PLDT + R L+P+V
Sbjct: 126 WNNGPLDTQIQWFRQLLPSV 145
>02_01_0485 +
3487578-3487635,3488281-3488399,3488600-3488698,
3488795-3488851,3488954-3489109,3489227-3489311,
3489489-3489579,3489693-3489857,3489923-3490045,
3490244-3490319,3490486-3490633,3490769-3491934,
3492041-3492231,3492321-3492513
Length = 908
Score = 25.0 bits (52), Expect = 9.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -1
Query: 111 LRVPGSGCDPWRYPRVDCAIVPASP 37
L G G PW PR+D +++ P
Sbjct: 417 LNFGGLGMSPWMQPRLDSSLLGLQP 441
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.131 0.443
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,000,472
Number of Sequences: 37544
Number of extensions: 191878
Number of successful extensions: 680
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 304131700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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