Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28m21
         (288 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g...    29   0.71 
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ...    29   0.71 
AC024809-10|AAF59547.1|  272|Caenorhabditis elegans Hypothetical...    28   0.93 
Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical pr...    28   1.2  
U58750-13|AAB00653.1|  616|Caenorhabditis elegans Hypothetical p...    26   3.8  
U39644-2|AAA80360.2|  966|Caenorhabditis elegans Hypothetical pr...    26   5.0  
Z70271-5|CAA94233.2|  443|Caenorhabditis elegans Hypothetical pr...    25   6.6  
Z82083-2|CAB04970.1|  263|Caenorhabditis elegans Hypothetical pr...    25   8.7  
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr...    25   8.7  
Z81110-2|CAB03259.1|  802|Caenorhabditis elegans Hypothetical pr...    25   8.7  
Z80214-1|CAB02262.1|  500|Caenorhabditis elegans Hypothetical pr...    25   8.7  
Z37092-11|CAA85461.2|  334|Caenorhabditis elegans Hypothetical p...    25   8.7  
AF031477-1|AAC15586.1|  443|Caenorhabditis elegans delta6-fatty-...    25   8.7  
AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane cal...    25   8.7  
AC025724-12|AAK68550.1| 1160|Caenorhabditis elegans Membrane cal...    25   8.7  
AC025724-11|AAM97979.1| 1137|Caenorhabditis elegans Membrane cal...    25   8.7  

>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
            protein.
          Length = 1492

 Score = 28.7 bits (61), Expect = 0.71
 Identities = 14/29 (48%), Positives = 14/29 (48%)
 Frame = -2

Query: 152  QSRQVLPMVVQGAHCGYQGADAIHGGIQG 66
            Q  Q      QGAH G QGA   H G QG
Sbjct: 1004 QGEQFGAQGAQGAHFGAQGAQGAHFGAQG 1032



 Score = 25.0 bits (52), Expect = 8.7
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -2

Query: 122  QGAHCGYQGADAIHGGIQG 66
            QGAH G QGA     G QG
Sbjct: 984  QGAHFGAQGAQGAQFGAQG 1002



 Score = 25.0 bits (52), Expect = 8.7
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -2

Query: 122  QGAHCGYQGADAIHGGIQG 66
            QGAH G QGA     G QG
Sbjct: 1024 QGAHFGAQGAQGTQFGAQG 1042


>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
            protein Y53H1C.2a protein.
          Length = 1512

 Score = 28.7 bits (61), Expect = 0.71
 Identities = 14/29 (48%), Positives = 14/29 (48%)
 Frame = -2

Query: 152  QSRQVLPMVVQGAHCGYQGADAIHGGIQG 66
            Q  Q      QGAH G QGA   H G QG
Sbjct: 1024 QGEQFGAQGAQGAHFGAQGAQGAHFGAQG 1052



 Score = 25.0 bits (52), Expect = 8.7
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -2

Query: 122  QGAHCGYQGADAIHGGIQG 66
            QGAH G QGA     G QG
Sbjct: 1004 QGAHFGAQGAQGAQFGAQG 1022



 Score = 25.0 bits (52), Expect = 8.7
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -2

Query: 122  QGAHCGYQGADAIHGGIQG 66
            QGAH G QGA     G QG
Sbjct: 1044 QGAHFGAQGAQGTQFGAQG 1062


>AC024809-10|AAF59547.1|  272|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.1 protein.
          Length = 272

 Score = 28.3 bits (60), Expect = 0.93
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = -1

Query: 102 PGSGCDPWRYPRVD--CAIVPASPTAGTT 22
           PGS CDP RY  +D  C++ P + T  TT
Sbjct: 179 PGSACDPDRY-NIDGLCSLNPPTTTTTTT 206


>Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical protein
            ZC84.6 protein.
          Length = 1474

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +1

Query: 151  CTTKQVCTKVGGIQ-RACLDPTLPYCNLGECSATPAEGCEP 270
            CT     T   G Q  A +D ++ YC  G+   T ++GC P
Sbjct: 890  CTIGHFVTCPAGFQCMAQIDGSMGYCCKGQPQLTASDGCPP 930


>U58750-13|AAB00653.1|  616|Caenorhabditis elegans Hypothetical
           protein F55G1.13 protein.
          Length = 616

 Score = 26.2 bits (55), Expect = 3.8
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = -2

Query: 209 GSRHALCIPPTFVQTCLVVQSRQVLPMVVQGAHCGYQGADAIHGGIQGLT 60
           GS + +C P  F ++CL   S +++  ++   + G  G D +    Q LT
Sbjct: 509 GSYYCVCSPNMFGKSCLFSNSDKIIYQILNATY-GDLGPDKLDEMAQELT 557


>U39644-2|AAA80360.2|  966|Caenorhabditis elegans Hypothetical
           protein T10E10.4 protein.
          Length = 966

 Score = 25.8 bits (54), Expect = 5.0
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = +1

Query: 148 DCTTKQVCTKVGGIQRACLDPTLPYCNLGECSATPAEGCEPASGAS 285
           +C     CT +GG     ++P  P  +   C  +P   C   SGAS
Sbjct: 693 ECPPGYGCTPLGGCCLLSMEPVCPTRSNAVCQCSPNNVC--PSGAS 736


>Z70271-5|CAA94233.2|  443|Caenorhabditis elegans Hypothetical
           protein W08D2.4 protein.
          Length = 443

 Score = 25.4 bits (53), Expect = 6.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 202 LDPTLPYCNLGECSATPAEGCE 267
           L PT+P CNL  C     E C+
Sbjct: 388 LFPTMPRCNLNACMKYVKEWCK 409


>Z82083-2|CAB04970.1|  263|Caenorhabditis elegans Hypothetical
           protein ZK1010.4 protein.
          Length = 263

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 187 IQRACLDPTLPYCNLGECSATPAEGCEPAS 276
           +  ACL   +  C    C+A PA  C P+S
Sbjct: 17  VTEACLSSGV--CGSSYCAAPPAVSCSPSS 44


>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
           protein T01D3.3b protein.
          Length = 1011

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = +1

Query: 196 ACLDPTLPYCNLGECSATPAEGCEP 270
           AC     P C      A PA GC+P
Sbjct: 299 ACFSSCQPSCQDPSTPACPAPGCQP 323


>Z81110-2|CAB03259.1|  802|Caenorhabditis elegans Hypothetical
           protein T01D3.3a protein.
          Length = 802

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = +1

Query: 196 ACLDPTLPYCNLGECSATPAEGCEP 270
           AC     P C      A PA GC+P
Sbjct: 90  ACFSSCQPSCQDPSTPACPAPGCQP 114


>Z80214-1|CAB02262.1|  500|Caenorhabditis elegans Hypothetical
           protein C27D8.2 protein.
          Length = 500

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +1

Query: 190 QRACLDPTLPYCNLGECSA 246
           QR CLDP     NLG C A
Sbjct: 274 QRVCLDPGHIKKNLGRCGA 292


>Z37092-11|CAA85461.2|  334|Caenorhabditis elegans Hypothetical
           protein F44F4.13 protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 75  YPRVDCAIVPASPTAGTTG 19
           YP +DC  V  S  AG TG
Sbjct: 98  YPAIDCKYVTFSLVAGNTG 116


>AF031477-1|AAC15586.1|  443|Caenorhabditis elegans
           delta6-fatty-acid-desaturase protein.
          Length = 443

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 202 LDPTLPYCNLGECSATPAEGCE 267
           L PT+P CNL  C     E C+
Sbjct: 388 LFPTMPRCNLNACVKYVKEWCK 409


>AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane
           calcium atpase protein3, isoform b protein.
          Length = 1234

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -1

Query: 231 EVAVRKSRVQTRPLYTSYFCTNLLGSAI 148
           E+  RK   +T PL +   C N+LG A+
Sbjct: 878 ELLKRKPYGRTSPLISRTMCKNILGHAV 905


>AC025724-12|AAK68550.1| 1160|Caenorhabditis elegans Membrane
           calcium atpase protein3, isoform a protein.
          Length = 1160

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -1

Query: 231 EVAVRKSRVQTRPLYTSYFCTNLLGSAI 148
           E+  RK   +T PL +   C N+LG A+
Sbjct: 878 ELLKRKPYGRTSPLISRTMCKNILGHAV 905


>AC025724-11|AAM97979.1| 1137|Caenorhabditis elegans Membrane
           calcium atpase protein3, isoform c protein.
          Length = 1137

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -1

Query: 231 EVAVRKSRVQTRPLYTSYFCTNLLGSAI 148
           E+  RK   +T PL +   C N+LG A+
Sbjct: 878 ELLKRKPYGRTSPLISRTMCKNILGHAV 905


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.317    0.131    0.443 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,840,501
Number of Sequences: 27780
Number of extensions: 133275
Number of successful extensions: 398
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 398
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 269889950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)