Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28l02
(495 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0916 - 32706039-32706332,32707483-32708103,32708450-327090... 136 7e-33
03_01_0093 - 745434-746057,746492-747112,747222-747791,747870-74... 135 2e-32
12_01_0850 + 7985289-7985789,7986636-7986888,7987173-7987231 103 8e-23
05_04_0392 - 20889699-20891726 93 8e-20
05_04_0052 - 17515344-17517353 93 1e-19
08_01_0654 - 5639419-5641449 90 1e-18
03_02_0546 - 9381989-9383733,9385838-9386054 89 1e-18
05_05_0109 - 22454539-22456268,22457069-22457279 89 2e-18
01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229 89 2e-18
01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819 87 6e-18
03_05_0877 + 28443481-28443538,28443641-28443911,28444028-284442... 87 1e-17
03_02_0540 + 9340379-9340592,9341250-9342988 86 1e-17
11_08_0075 + 28173220-28173433,28175348-28177083 85 4e-17
02_01_0112 - 839048-839552,839638-839720,839828-839982,840078-84... 85 4e-17
03_06_0484 + 34233042-34233258,34235317-34237049 84 7e-17
11_01_0563 + 4423609-4423846,4424671-4426132,4428949-4429364,443... 81 5e-16
05_03_0397 + 13488642-13488941,13489711-13489963,13490594-134906... 80 8e-16
03_02_0542 - 9348126-9349585,9352433-9352655 77 8e-15
11_01_0564 - 4447078-4448519,4449465-4449711 76 1e-14
01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165 69 2e-12
01_01_0573 + 4253484-4254653,4255526-4255735,4255842-4255937,425... 54 6e-08
05_01_0550 + 4820086-4821255,4822112-4822321,4822429-4822524,482... 52 2e-07
12_01_0346 + 2652181-2653566 47 7e-06
03_02_0180 - 6211823-6213559 38 0.006
06_03_1137 + 27903012-27904196,27904330-27904542,27905775-279058... 34 0.055
06_01_0770 - 5756200-5756741,5756790-5757286,5757356-5757782,575... 34 0.072
05_07_0320 + 29235266-29235305,29235409-29236682 33 0.17
01_01_0770 - 5968042-5968281,5968799-5969156,5970975-5971384 32 0.29
01_06_1114 + 34619597-34619972,34620772-34620852,34621294-346213... 29 2.1
01_01_0718 - 5578959-5580761,5583683-5584160,5584239-5584267 28 3.6
11_04_0460 - 17955102-17955146,17955253-17955310,17955442-179555... 28 4.7
05_02_0119 + 6793292-6793613,6795793-6795952,6796416-6796458,679... 28 4.7
04_03_0057 + 10407402-10407452,10407540-10407782,10408506-104089... 28 4.7
03_01_0414 + 3183292-3183735,3184547-3184969,3185435-3185535,318... 28 4.7
11_06_0693 - 26334574-26336121 27 8.3
09_04_0643 + 19176561-19176644,19176761-19176902,19178084-191781... 27 8.3
04_04_1399 - 33249210-33249359,33249521-33249597,33249735-332498... 27 8.3
03_04_0053 + 16873735-16873927,16874011-16874162,16874286-168743... 27 8.3
>02_05_0916 -
32706039-32706332,32707483-32708103,32708450-32709070,
32709183-32709752,32709840-32709918,32710002-32710075,
32711336-32711398
Length = 773
Score = 136 bits (330), Expect = 7e-33
Identities = 63/77 (81%), Positives = 71/77 (92%)
Frame = +3
Query: 264 VIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSG 443
VIGIDLGTTNSCV+VMEGK PKV+ENSEG+RTTPS VAF+++GERLVG PAKRQAVTN
Sbjct: 54 VIGIDLGTTNSCVSVMEGKNPKVIENSEGTRTTPSVVAFNQKGERLVGTPAKRQAVTNPQ 113
Query: 444 NTFYATKRLIGRRFDDP 494
NTF+ TKRLIGRRF+DP
Sbjct: 114 NTFFGTKRLIGRRFEDP 130
>03_01_0093 -
745434-746057,746492-747112,747222-747791,747870-747948,
748258-748331,748385-748387
Length = 656
Score = 135 bits (327), Expect = 2e-32
Identities = 63/77 (81%), Positives = 70/77 (90%)
Frame = +3
Query: 264 VIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSG 443
VIGIDLGTTNSCV+VMEGK PKV+ENSEG+RTTPS VAF+++GE LVG PAKRQAVTN
Sbjct: 34 VIGIDLGTTNSCVSVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPQ 93
Query: 444 NTFYATKRLIGRRFDDP 494
NTF+ TKRLIGRRFDDP
Sbjct: 94 NTFFGTKRLIGRRFDDP 110
>12_01_0850 + 7985289-7985789,7986636-7986888,7987173-7987231
Length = 270
Score = 103 bits (247), Expect = 8e-23
Identities = 49/73 (67%), Positives = 57/73 (78%)
Frame = +3
Query: 264 VIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSG 443
V+GIDLGTTNS VA MEG P V+ N+EG RTTPS VA++K GERLVG AKRQAV N
Sbjct: 53 VVGIDLGTTNSAVAAMEGGKPTVITNAEGQRTTPSVVAYTKGGERLVGQIAKRQAVVNPE 112
Query: 444 NTFYATKRLIGRR 482
NTF++ KR IGR+
Sbjct: 113 NTFFSVKRFIGRK 125
>05_04_0392 - 20889699-20891726
Length = 675
Score = 93.5 bits (222), Expect = 8e-20
Identities = 46/84 (54%), Positives = 54/84 (64%)
Frame = +3
Query: 240 KSEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAK 419
KS G G VIGIDLGTT SCV V +++ N +G+R TPS VAF+ GERL+G AK
Sbjct: 38 KSGGGGGTVIGIDLGTTYSCVGVYRNDRVEIIANDQGNRITPSWVAFTDGGERLIGEAAK 97
Query: 420 RQAVTNSGNTFYATKRLIGRRFDD 491
QA N T Y KRLIGR+F D
Sbjct: 98 NQAAANPERTIYDAKRLIGRQFSD 121
>05_04_0052 - 17515344-17517353
Length = 669
Score = 93.1 bits (221), Expect = 1e-19
Identities = 46/81 (56%), Positives = 53/81 (65%)
Frame = +3
Query: 249 GVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQA 428
G G VIGIDLGTT SCV V +++ N +G+R TPS VAF+ GERL+G AK QA
Sbjct: 36 GGGGTVIGIDLGTTYSCVGVYRNGHVEIIANDQGNRITPSWVAFTGGGERLIGEAAKNQA 95
Query: 429 VTNSGNTFYATKRLIGRRFDD 491
N G T Y KRLIGRRF D
Sbjct: 96 AANPGRTVYDAKRLIGRRFAD 116
>08_01_0654 - 5639419-5641449
Length = 676
Score = 89.8 bits (213), Expect = 1e-18
Identities = 44/81 (54%), Positives = 52/81 (64%)
Frame = +3
Query: 249 GVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQA 428
G G VIGIDLGTT SCV V +++ N +G+R TPS VAF+ GERL+G AK QA
Sbjct: 41 GGGGTVIGIDLGTTYSCVGVYRNGHVEIIANDQGNRITPSWVAFTDGGERLIGEAAKNQA 100
Query: 429 VTNSGNTFYATKRLIGRRFDD 491
N T Y KRLIGR+F D
Sbjct: 101 AANPERTIYDAKRLIGRQFSD 121
>03_02_0546 - 9381989-9383733,9385838-9386054
Length = 653
Score = 89.4 bits (212), Expect = 1e-18
Identities = 46/86 (53%), Positives = 57/86 (66%)
Frame = +3
Query: 237 NKSEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPA 416
NK EG IGIDLGTT SCV V + +++ N +G+RTTPS+VAF+ + ERL+G A
Sbjct: 4 NKGEG---PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT-DTERLIGDAA 59
Query: 417 KRQAVTNSGNTFYATKRLIGRRFDDP 494
K Q N NT + KRLIGRRF DP
Sbjct: 60 KNQVAMNPTNTVFDAKRLIGRRFSDP 85
>05_05_0109 - 22454539-22456268,22457069-22457279
Length = 646
Score = 89.0 bits (211), Expect = 2e-18
Identities = 43/79 (54%), Positives = 54/79 (68%)
Frame = +3
Query: 258 GAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 437
G IGIDLGTT SCV V + +++ N +G+RTTPS+VAF+ + ERL+G AK Q N
Sbjct: 6 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMN 64
Query: 438 SGNTFYATKRLIGRRFDDP 494
NT + KRLIGRRF DP
Sbjct: 65 PTNTVFDAKRLIGRRFSDP 83
>01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229
Length = 841
Score = 89.0 bits (211), Expect = 2e-18
Identities = 43/79 (54%), Positives = 54/79 (68%)
Frame = +3
Query: 258 GAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 437
G IGIDLGTT SCV V + +++ N +G+RTTPS+VAF+ + ERL+G AK Q N
Sbjct: 199 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT-DSERLIGDAAKNQVAMN 257
Query: 438 SGNTFYATKRLIGRRFDDP 494
NT + KRLIGRRF DP
Sbjct: 258 PINTVFDAKRLIGRRFSDP 276
>01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819
Length = 539
Score = 87.4 bits (207), Expect = 6e-18
Identities = 45/78 (57%), Positives = 53/78 (67%)
Frame = +3
Query: 258 GAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 437
G VIGIDLGT SCVAV + ++V N G R TPS+ AF+ + ERLVG AK QA N
Sbjct: 9 GPVIGIDLGTACSCVAVWQNGRAEIVTNEHGGRATPSYAAFT-DTERLVGDAAKSQASRN 67
Query: 438 SGNTFYATKRLIGRRFDD 491
NT +ATKRL+GRRF D
Sbjct: 68 PTNTVFATKRLMGRRFSD 85
>03_05_0877 +
28443481-28443538,28443641-28443911,28444028-28444242,
28444329-28445057,28445143-28445297,28445384-28445965
Length = 669
Score = 86.6 bits (205), Expect = 1e-17
Identities = 45/79 (56%), Positives = 52/79 (65%)
Frame = +3
Query: 255 RGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVT 434
+G VIGIDLGTT SCV V +V N +G+R TPS VAF+ + ERLVG AK QA
Sbjct: 36 KGPVIGIDLGTTYSCVGVYRNGHVDIVANDQGNRITPSWVAFT-DDERLVGEAAKNQAAL 94
Query: 435 NSGNTFYATKRLIGRRFDD 491
N T + KRLIGRRFDD
Sbjct: 95 NPDRTIFDIKRLIGRRFDD 113
>03_02_0540 + 9340379-9340592,9341250-9342988
Length = 650
Score = 86.2 bits (204), Expect = 1e-17
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = +3
Query: 258 GAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 437
G IGIDLGTT SCV V + +++ N +G+RTTPS+VAF+ + ERL+G AK Q N
Sbjct: 7 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT-DSERLIGDAAKNQVAMN 65
Query: 438 SGNTFYATKRLIGRRFDD 491
NT + KRLIGRRF D
Sbjct: 66 PINTVFDAKRLIGRRFSD 83
>11_08_0075 + 28173220-28173433,28175348-28177083
Length = 649
Score = 84.6 bits (200), Expect = 4e-17
Identities = 41/78 (52%), Positives = 52/78 (66%)
Frame = +3
Query: 258 GAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 437
G IGIDLGTT SCV V + +++ N +G+RTTPS+V F+ + ERL+G AK Q N
Sbjct: 7 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DSERLIGDAAKNQVAMN 65
Query: 438 SGNTFYATKRLIGRRFDD 491
NT + KRLIGRRF D
Sbjct: 66 PINTVFDAKRLIGRRFSD 83
>02_01_0112 -
839048-839552,839638-839720,839828-839982,840078-840557,
840855-841097,841189-841403,841489-841756,842477-842525
Length = 665
Score = 84.6 bits (200), Expect = 4e-17
Identities = 41/78 (52%), Positives = 53/78 (67%)
Frame = +3
Query: 258 GAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 437
G VIGIDLGTT SCV V + +++ N +G+R TPS VAF+ + ERL+G AK QA N
Sbjct: 33 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVN 91
Query: 438 SGNTFYATKRLIGRRFDD 491
T + KRLIGR+F+D
Sbjct: 92 PERTIFDVKRLIGRKFED 109
>03_06_0484 + 34233042-34233258,34235317-34237049
Length = 649
Score = 83.8 bits (198), Expect = 7e-17
Identities = 41/78 (52%), Positives = 52/78 (66%)
Frame = +3
Query: 258 GAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 437
G IGIDLGTT SCV V + +++ N +G+RTTPS+V F+ + ERL+G AK Q N
Sbjct: 8 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMN 66
Query: 438 SGNTFYATKRLIGRRFDD 491
NT + KRLIGRRF D
Sbjct: 67 PINTVFDAKRLIGRRFSD 84
>11_01_0563 +
4423609-4423846,4424671-4426132,4428949-4429364,
4430555-4432052,4432199-4432217,4432469-4432675,
4432814-4433065
Length = 1363
Score = 81.0 bits (191), Expect = 5e-16
Identities = 43/84 (51%), Positives = 51/84 (60%)
Frame = +3
Query: 240 KSEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAK 419
K G G IGIDLGTT SCVAV + + N +G+R TPS VAF+ +R VG A+
Sbjct: 9 KGGGGGGPAIGIDLGTTYSCVAVRRRYRSEAITNDQGNRITPSCVAFT-AADRFVGDAAE 67
Query: 420 RQAVTNSGNTFYATKRLIGRRFDD 491
QA N NT + KRLIGRRF D
Sbjct: 68 NQAALNPTNTIFEVKRLIGRRFSD 91
Score = 79.0 bits (186), Expect = 2e-15
Identities = 41/79 (51%), Positives = 50/79 (63%)
Frame = +3
Query: 249 GVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQA 428
G G IGIDLGTT SC AV +V+ N +G+R TPS VAF+ + +R VG A+ QA
Sbjct: 638 GGGGPAIGIDLGTTYSCAAVRRHNRSEVITNDQGNRITPSCVAFTAD-DRFVGDAAENQA 696
Query: 429 VTNSGNTFYATKRLIGRRF 485
N NT + KRLIGRRF
Sbjct: 697 ALNPTNTIFEAKRLIGRRF 715
>05_03_0397 +
13488642-13488941,13489711-13489963,13490594-13490673,
13491251-13491393,13491512-13491610,13491785-13491974,
13492504-13492902,13492993-13493400
Length = 623
Score = 80.2 bits (189), Expect = 8e-16
Identities = 36/61 (59%), Positives = 47/61 (77%)
Frame = +3
Query: 309 MEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGNTFYATKRLIGRRFD 488
MEG P +V N+EG+RTTPS VA++K G+RLVG AKRQAV N NTF++ KR IGR+ +
Sbjct: 1 MEGGKPTIVTNAEGARTTPSVVAYTKSGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMN 60
Query: 489 D 491
+
Sbjct: 61 E 61
>03_02_0542 - 9348126-9349585,9352433-9352655
Length = 560
Score = 77.0 bits (181), Expect = 8e-15
Identities = 41/78 (52%), Positives = 50/78 (64%)
Frame = +3
Query: 258 GAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 437
G +GIDLGTT SCVAV +V+ N +G+ TTPS VAF+ + RL+G A QA N
Sbjct: 10 GPAVGIDLGTTYSCVAVWRRGRVEVIPNDQGNLTTPSCVAFT-DTWRLIGDAALNQAAMN 68
Query: 438 SGNTFYATKRLIGRRFDD 491
NT + KRLIGRRF D
Sbjct: 69 PLNTIFDAKRLIGRRFSD 86
>11_01_0564 - 4447078-4448519,4449465-4449711
Length = 562
Score = 76.2 bits (179), Expect = 1e-14
Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +3
Query: 249 GVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAF-SKEGERLVGMPAKRQ 425
G G +GIDLGTT SCVAV +V+ N +G+R TPS VAF + + + VG A Q
Sbjct: 13 GGGGPAVGIDLGTTYSCVAVWRHDRGEVIANDQGNRLTPSCVAFTADDDDSFVGDAAFNQ 72
Query: 426 AVTNSGNTFYATKRLIGRRFDD 491
+ N NT + KRLIGRRF D
Sbjct: 73 SALNPTNTIFEVKRLIGRRFSD 94
>01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165
Length = 648
Score = 68.9 bits (161), Expect = 2e-12
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Frame = +3
Query: 261 AVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERL-VGMPAKRQAVTN 437
AV+GID+G T SCVAV +++ N +GSR TPS VAF+ G RL VG AK QAV +
Sbjct: 35 AVLGIDIGATYSCVAVYCKGRVEIIPNDQGSRLTPSWVAFTDGGGRLVVGEAAKEQAVGS 94
Query: 438 SGNTFYATKRLIGRRFDD 491
G + RL+G++ D
Sbjct: 95 PGRAVHDFMRLLGKKLGD 112
>01_01_0573 +
4253484-4254653,4255526-4255735,4255842-4255937,
4256034-4256255,4256829-4257023,4257097-4257243,
4257323-4257472,4257762-4257892,4257978-4258194
Length = 845
Score = 54.0 bits (124), Expect = 6e-08
Identities = 28/78 (35%), Positives = 41/78 (52%)
Frame = +3
Query: 261 AVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNS 440
+V+G DLG + VAV + VV N E R TP+ V F + +R +G + N
Sbjct: 2 SVVGFDLGNESCIVAVARQRGIDVVLNEESKRETPAIVCFG-DKQRFIGTAGAASSTMNP 60
Query: 441 GNTFYATKRLIGRRFDDP 494
N+ KRL+GR++ DP
Sbjct: 61 KNSVSQIKRLLGRKYSDP 78
>05_01_0550 +
4820086-4821255,4822112-4822321,4822429-4822524,
4822610-4822828,4823201-4823395,4823466-4823612,
4823712-4823861,4825015-4825145,4825234-4825477
Length = 853
Score = 52.4 bits (120), Expect = 2e-07
Identities = 28/78 (35%), Positives = 40/78 (51%)
Frame = +3
Query: 261 AVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNS 440
+V+G D+G + VAV + VV N E R TP+ V F + +R +G + N
Sbjct: 2 SVVGFDVGNESGIVAVARQRGIDVVLNEESKRETPAVVCFG-DKQRFIGTAGAASSTMNP 60
Query: 441 GNTFYATKRLIGRRFDDP 494
N+ KRL+GR F DP
Sbjct: 61 RNSVSQIKRLLGRAFADP 78
>12_01_0346 + 2652181-2653566
Length = 461
Score = 47.2 bits (107), Expect = 7e-06
Identities = 33/81 (40%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +3
Query: 258 GAVIGIDLGTTNSCVAVM--EGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAV 431
G VI +DLG TNSCVA E P + P+ VAF+ +G+ LVG AK
Sbjct: 44 GTVIAVDLGNTNSCVAGYGDEADAPPLFR-----LCIPTSVAFTGDGDALVGEAAKNHPA 98
Query: 432 TNSGNTFYATKRLIGRRFDDP 494
SG KRL+G RF P
Sbjct: 99 AISG-----FKRLLGTRFGSP 114
>03_02_0180 - 6211823-6213559
Length = 578
Score = 37.5 bits (83), Expect = 0.006
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Frame = +3
Query: 267 IGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKE--GERLVGMPAKRQAVTN- 437
IGID+GT+N VAV G ++++N+ + S+V F + + G +
Sbjct: 29 IGIDIGTSNCSVAVWTGHQVELLKNTRNQKGMRSYVMFKDDSLSAGVTGGATREHGHEER 88
Query: 438 ---SGNTFYATKRLIGRRFDD 491
SG+ + KRLIGR D
Sbjct: 89 DILSGSAIFNMKRLIGRMDTD 109
>06_03_1137 +
27903012-27904196,27904330-27904542,27905775-27905867,
27905940-27906008,27906412-27906612,27906688-27906834,
27907524-27907652,27909001-27909131,27909240-27909333
Length = 753
Score = 34.3 bits (75), Expect = 0.055
Identities = 24/71 (33%), Positives = 37/71 (52%)
Frame = +3
Query: 261 AVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNS 440
+V+G D+G A + V+ N+E +R +P+ VAFS RL+G A A +S
Sbjct: 2 SVVGFDVGNDTLVAAAARQRGIDVLLNAESNRESPAAVAFS-HNARLLGPHAAGAA--SS 58
Query: 441 GNTFYATKRLI 473
F + KRL+
Sbjct: 59 HAPFSSIKRLL 69
>06_01_0770 -
5756200-5756741,5756790-5757286,5757356-5757782,
5757854-5757911
Length = 507
Score = 33.9 bits (74), Expect = 0.072
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +3
Query: 252 VRGAVIGIDLGTTNSCVA-VMEGKTPKVVENSEGSRTTPSHVAFSKE-GERLVGMPAKRQ 425
V GA I LG TNSC+A + P + S PS VA + + G + G A +
Sbjct: 66 VLGAAAAIHLGNTNSCIAGYDDDDAPLGAKRSYYQFCIPSWVALAHDNGTVISGEAAMNR 125
Query: 426 AVTNSGNTFYATKRLIGRR 482
A + A RL+ RR
Sbjct: 126 AALSPSTAVSAFMRLLHRR 144
>05_07_0320 + 29235266-29235305,29235409-29236682
Length = 437
Score = 32.7 bits (71), Expect = 0.17
Identities = 28/79 (35%), Positives = 34/79 (43%)
Frame = +3
Query: 258 GAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 437
G I +G TNSC+A +P S PS VAF+ L G PA +
Sbjct: 46 GTAAAIYIGNTNSCIAGYH--SPPDTATSY-RFCIPSWVAFTANATTLCGQPAVDHSAAI 102
Query: 438 SGNTFYATKRLIGRRFDDP 494
SG KRLIG + DP
Sbjct: 103 SG-----FKRLIGLQPGDP 116
>01_01_0770 - 5968042-5968281,5968799-5969156,5970975-5971384
Length = 335
Score = 31.9 bits (69), Expect = 0.29
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = +3
Query: 150 YTQRNFSSILKSNATPTVPIYQRHGVQFRNKSEGVRGAVIGIDLGTTNSCVAVMEGKTPK 329
+T S+L+SN P + I R G +G G +++G T + ++ K
Sbjct: 209 HTDPQIISVLRSNGAPGLEISLRDGAWASVPHDG-DGDSFFVNVGDTLQVLTNGRFRSVK 267
Query: 330 --VVENSEGSRTTPSHVAFSKEGERLVGMPA 416
VV NSE SR + GERL +PA
Sbjct: 268 HRVVVNSEKSRVSMVFFGGPPPGERLAPLPA 298
>01_06_1114 +
34619597-34619972,34620772-34620852,34621294-34621394,
34621958-34622045,34622192-34622457
Length = 303
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -3
Query: 433 VTACRLAGIPTRRSPSFEKATWEGVVRDPSLFSTTLGVLPSMTATH 296
VTAC L G+P +PS G +P + + PS ++ H
Sbjct: 121 VTACALLGVPVPMAPSASPMAGLGPSTEPQMPEKSPSASPSESSNH 166
>01_01_0718 - 5578959-5580761,5583683-5584160,5584239-5584267
Length = 769
Score = 28.3 bits (60), Expect = 3.6
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +1
Query: 301 LPSWRARHPRWWKTVKGLGRLPPMWPSRKRASVWSECPPNGKRSR--IAVTRFTRRRD*S 474
LP AR RWW L PP+ P S S PP K SR + R ++R S
Sbjct: 35 LPPMEARRFRWW--ADELATAPPLPPWSLSPSP-SPPPPPTKPSRRTLGKARAPKKRSIS 91
Query: 475 DVDSTIP 495
D+ + P
Sbjct: 92 DLFAAAP 98
>11_04_0460 -
17955102-17955146,17955253-17955310,17955442-17955593,
17955888-17955993,17956101-17956222,17956766-17956834,
17956969-17957214,17957331-17957373,17957449-17957520,
17957954-17958066,17958158-17958238,17958343-17958415,
17959413-17959519,17960410-17960514,17960684-17960974,
17961621-17961707,17961774-17961842,17961917-17961973,
17962057-17962155,17962223-17962312,17962395-17962511,
17964164-17964244,17964353-17964502,17964812-17964956,
17967359-17967510,17967647-17967784,17967838-17967914,
17968032-17968134
Length = 1015
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 371 MGGSRPRPFTVFHHLGCLALHDGN 300
MG R FHHLGCL L + N
Sbjct: 855 MGNDGARRANSFHHLGCLLLAEHN 878
>05_02_0119 +
6793292-6793613,6795793-6795952,6796416-6796458,
6797015-6797335
Length = 281
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 86 VERDAGIRPKGFRVHRIKFR--LVYAEKFFVNFEKQRNTHSSYL 211
V D G+R KGFR+ + +R L + + F+ ++ S +L
Sbjct: 154 VSVDGGVRTKGFRIQKQSYRLSLKFRHPYQAKFDSNQSKTSKWL 197
>04_03_0057 +
10407402-10407452,10407540-10407782,10408506-10408976,
10409058-10409483,10409559-10409618,10409694-10409807,
10409888-10409956
Length = 477
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 334 WKTVKGLGRLPPMWPSRKRASVWSECPPNGKR 429
WKT LG L P RK +VW +C K+
Sbjct: 67 WKTPSSLGHLLRKPPLRKSWAVWYKCVSASKQ 98
>03_01_0414 + 3183292-3183735,3184547-3184969,3185435-3185535,
3186178-3187439,3187625-3187665,3187777-3187845,
3187975-3188075,3188413-3188491,3188570-3188668,
3188757-3188825,3188918-3188967,3189211-3189387,
3189496-3189634
Length = 1017
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/60 (21%), Positives = 25/60 (41%)
Frame = -3
Query: 409 IPTRRSPSFEKATWEGVVRDPSLFSTTLGVLPSMTATHEFVVPRSIPMTAPRTPSDLFLN 230
IP P + WE +DP+L + + ++ V P +P P ++++N
Sbjct: 954 IPKEIDPLVARIIWECWQKDPNLRPSFAQLTSALKTVQRLVTPSHQESQSPPVPQEIWVN 1013
>11_06_0693 - 26334574-26336121
Length = 515
Score = 27.1 bits (57), Expect = 8.3
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -2
Query: 413 GHSDQTLALFREGHMGGSRPRPFTVFHHLGCLALHDGNARVCR 285
GH + + L+RE G P T LGC A H G V R
Sbjct: 342 GHGIEGIELYREMRTHGEMPNEVTFLGVLGCCA-HAGAVDVGR 383
>09_04_0643 +
19176561-19176644,19176761-19176902,19178084-19178172,
19178470-19179195
Length = 346
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = -1
Query: 402 PDARPLSRRPHGRESSETLHCFPP-PW 325
PD L R P GR HC PP PW
Sbjct: 221 PDGAAL-RSPSGRRYDAVAHCAPPAPW 246
>04_04_1399 -
33249210-33249359,33249521-33249597,33249735-33249814,
33249904-33250094,33250183-33250469,33250595-33250721,
33250878-33250994,33251085-33251198,33251510-33251671,
33252909-33252974,33253098-33253269,33253377-33253584,
33253728-33253776,33254132-33254305
Length = 657
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -2
Query: 308 DGNARVCRAQIDSNDGSTNTLRLVSKLYAMSLVNRNCGCCVAFQN 174
DGN + + + GS + + + ++ S VN N GC A N
Sbjct: 372 DGNKEMMAIGLMNIVGSCTSCYVTTGAFSRSAVNHNAGCKTAMSN 416
>03_04_0053 +
16873735-16873927,16874011-16874162,16874286-16874380,
16874704-16874818,16875054-16875343,16875436-16875585,
16876478-16876598,16876671-16876942,16877466-16877937
Length = 619
Score = 27.1 bits (57), Expect = 8.3
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = -2
Query: 392 ALFREGHMGGSRPRPFTVFHHLGCLALHDGNARVCRAQIDSNDG 261
A+F G + PR T HH HD R CR S +G
Sbjct: 12 AIFFSGAHAAAHPRTRTPHHHCSPQRTHDARGR-CRLTAKSANG 54
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,912,697
Number of Sequences: 37544
Number of extensions: 346598
Number of successful extensions: 1272
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1251
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1035514020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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