Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28l02
(495 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 141 2e-34
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 141 2e-34
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 87 5e-18
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 87 5e-18
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 87 7e-18
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 87 7e-18
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 87 7e-18
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 86 1e-17
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 85 4e-17
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 83 1e-16
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 74 7e-14
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 74 7e-14
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 54 8e-08
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 52 2e-07
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 29 1.4
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 29 1.4
U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of fu... 28 3.2
U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of fu... 28 3.2
AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger p... 28 3.2
U61944-3|AAB03119.1| 818|Caenorhabditis elegans Hypothetical pr... 27 9.9
U51993-3|AAB36853.2| 958|Caenorhabditis elegans Hypothetical pr... 27 9.9
U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical pr... 27 9.9
AF125967-1|AAD14759.1| 271|Caenorhabditis elegans Hypothetical ... 27 9.9
AC084158-7|AAK68560.1| 929|Caenorhabditis elegans Hypothetical ... 27 9.9
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 141 bits (342), Expect = 2e-34
Identities = 65/87 (74%), Positives = 77/87 (88%)
Frame = +3
Query: 234 RNKSEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMP 413
R+ S+ +G VIGIDLGTTNSCV++MEGKTPKV+EN+EG RTTPS VAF+ +GERLVG P
Sbjct: 23 RSLSDKPKGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAP 82
Query: 414 AKRQAVTNSGNTFYATKRLIGRRFDDP 494
AKRQAVTNS NT +ATKRLIGRR++DP
Sbjct: 83 AKRQAVTNSANTLFATKRLIGRRYEDP 109
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 141 bits (342), Expect = 2e-34
Identities = 65/87 (74%), Positives = 77/87 (88%)
Frame = +3
Query: 234 RNKSEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMP 413
R+ S+ +G VIGIDLGTTNSCV++MEGKTPKV+EN+EG RTTPS VAF+ +GERLVG P
Sbjct: 23 RSLSDKPKGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAP 82
Query: 414 AKRQAVTNSGNTFYATKRLIGRRFDDP 494
AKRQAVTNS NT +ATKRLIGRR++DP
Sbjct: 83 AKRQAVTNSANTLFATKRLIGRRYEDP 109
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 87.4 bits (207), Expect = 5e-18
Identities = 44/77 (57%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = +3
Query: 267 IGIDLGTTNSCVAV-MEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSG 443
+GIDLGTT SCV V M GK +++ N +G+RTTPS+VAF+ + ERL+G AK Q N
Sbjct: 7 VGIDLGTTYSCVGVFMHGKV-EIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPH 64
Query: 444 NTFYATKRLIGRRFDDP 494
NT + KRLIGR+FDDP
Sbjct: 65 NTVFDAKRLIGRKFDDP 81
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 87.4 bits (207), Expect = 5e-18
Identities = 44/77 (57%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = +3
Query: 267 IGIDLGTTNSCVAV-MEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSG 443
+GIDLGTT SCV V M GK +++ N +G+RTTPS+VAF+ + ERL+G AK Q N
Sbjct: 7 VGIDLGTTYSCVGVFMHGKV-EIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPH 64
Query: 444 NTFYATKRLIGRRFDDP 494
NT + KRLIGR+FDDP
Sbjct: 65 NTVFDAKRLIGRKFDDP 81
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 87.0 bits (206), Expect = 7e-18
Identities = 43/75 (57%), Positives = 55/75 (73%)
Frame = +3
Query: 267 IGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 446
IGIDLGTT SCV + + +++ NSEG++TTPS+VAF+ + ERLVG AK QA N N
Sbjct: 7 IGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAARNPEN 65
Query: 447 TFYATKRLIGRRFDD 491
T + KRLIGRRFD+
Sbjct: 66 TVFDAKRLIGRRFDE 80
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 87.0 bits (206), Expect = 7e-18
Identities = 43/75 (57%), Positives = 55/75 (73%)
Frame = +3
Query: 267 IGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 446
IGIDLGTT SCV + + +++ NSEG++TTPS+VAF+ + ERLVG AK QA N N
Sbjct: 7 IGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAARNPEN 65
Query: 447 TFYATKRLIGRRFDD 491
T + KRLIGRRFD+
Sbjct: 66 TVFDAKRLIGRRFDE 80
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 87.0 bits (206), Expect = 7e-18
Identities = 43/75 (57%), Positives = 55/75 (73%)
Frame = +3
Query: 267 IGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 446
IGIDLGTT SCV + + +++ NSEG++TTPS+VAF+ + ERLVG AK QA N N
Sbjct: 7 IGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAARNPEN 65
Query: 447 TFYATKRLIGRRFDD 491
T + KRLIGRRFD+
Sbjct: 66 TVFDAKRLIGRRFDE 80
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 86.2 bits (204), Expect = 1e-17
Identities = 42/85 (49%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Frame = +3
Query: 240 KSEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFS-KEGERLVGMPA 416
K E G +IGIDLGTT SCV V + +++ N +G+R TPS+VAFS +G+RL+G A
Sbjct: 27 KKETKYGTIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAA 86
Query: 417 KRQAVTNSGNTFYATKRLIGRRFDD 491
K Q N NT + KRLIGR ++D
Sbjct: 87 KNQLTINPENTIFDAKRLIGRDYND 111
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 84.6 bits (200), Expect = 4e-17
Identities = 41/85 (48%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Frame = +3
Query: 240 KSEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFS-KEGERLVGMPA 416
+ E G +IGIDLGTT SCV V + +++ N +G+R TPS+VAFS +GERL+G A
Sbjct: 24 EKEEKMGTIIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAA 83
Query: 417 KRQAVTNSGNTFYATKRLIGRRFDD 491
K Q N NT + KRLIGR +++
Sbjct: 84 KNQLTINPENTIFDAKRLIGRFYNE 108
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 83.0 bits (196), Expect = 1e-16
Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +3
Query: 240 KSEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFS-KEGERLVGMPA 416
K E +IGIDLGTT SCV V + +++ N +G+R TPS+VAFS +G+RL+G A
Sbjct: 27 KKETKYETIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAA 86
Query: 417 KRQAVTNSGNTFYATKRLIGRRFDD 491
K Q N NT + KRLIGR ++D
Sbjct: 87 KNQLTINPENTIFDAKRLIGRDYND 111
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 73.7 bits (173), Expect = 7e-14
Identities = 35/75 (46%), Positives = 49/75 (65%)
Frame = +3
Query: 267 IGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 446
IGIDLGTT SCVA + ++EN G RTTPS +A ++G+ L+G AK + + N
Sbjct: 3 IGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAK-DVIGKATN 61
Query: 447 TFYATKRLIGRRFDD 491
+ + KR+IGRR+DD
Sbjct: 62 SLFDVKRIIGRRYDD 76
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 73.7 bits (173), Expect = 7e-14
Identities = 35/75 (46%), Positives = 49/75 (65%)
Frame = +3
Query: 267 IGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 446
IGIDLGTT SCVA + ++EN G RTTPS +A ++G+ L+G AK + + N
Sbjct: 3 IGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAK-DVIGKATN 61
Query: 447 TFYATKRLIGRRFDD 491
+ + KR+IGRR+DD
Sbjct: 62 SLFDVKRIIGRRYDD 76
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 53.6 bits (123), Expect = 8e-08
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +3
Query: 264 VIGIDLGTTNSCVAVMEGKTPK--VVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 437
+ GIDLGTT S + + T + ++ + G ++ PS VAF G L+G A Q N
Sbjct: 35 IAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIGTRATEQQEHN 94
Query: 438 SGNTFYATKRLIGRRFD 488
T Y KR IGR F+
Sbjct: 95 PKRTIYDAKRFIGRNFE 111
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 52.4 bits (120), Expect = 2e-07
Identities = 27/78 (34%), Positives = 42/78 (53%)
Frame = +3
Query: 261 AVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNS 440
+V+G D+G N + V +V+ N TP+ V+F + +R +G+ A++ TN
Sbjct: 2 SVLGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPK-DRSMGVAARQAVTTNI 60
Query: 441 GNTFYATKRLIGRRFDDP 494
NT K LIGR+F DP
Sbjct: 61 KNTVINFKHLIGRKFSDP 78
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 29.5 bits (63), Expect = 1.4
Identities = 20/79 (25%), Positives = 29/79 (36%), Gaps = 6/79 (7%)
Frame = +1
Query: 184 ATQHPQFLFTSDMAYNLETSLRVFV------EPSLESIWARQTRALPSWRARHPRWWKTV 345
AT H +F + Y+ E + F+ P + S T+ LP R R
Sbjct: 572 ATDHCRFRSMTPKEYDYELEVDGFIALLNGASPEVSSASGTSTKTLPGGRVSRKRTHDEA 631
Query: 346 KGLGRLPPMWPSRKRASVW 402
+PP R+R VW
Sbjct: 632 DDSNSVPPTEFGRRRVEVW 650
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 29.5 bits (63), Expect = 1.4
Identities = 20/79 (25%), Positives = 29/79 (36%), Gaps = 6/79 (7%)
Frame = +1
Query: 184 ATQHPQFLFTSDMAYNLETSLRVFV------EPSLESIWARQTRALPSWRARHPRWWKTV 345
AT H +F + Y+ E + F+ P + S T+ LP R R
Sbjct: 572 ATDHCRFRSMTPKEYDYELEVDGFIALLNGASPEVSSASGTSTKTLPGGRVSRKRTHDEA 631
Query: 346 KGLGRLPPMWPSRKRASVW 402
+PP R+R VW
Sbjct: 632 DDSNSVPPTEFGRRRVEVW 650
>U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of
fusion protein 2,isoform a protein.
Length = 302
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 318 KTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNS 440
K KV EN + S+ +P H S G +G P +++T S
Sbjct: 216 KHTKVHENEKKSQLSPEHDESSDSGNASIGTPTTDESLTFS 256
>U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of
fusion protein 2,isoform b protein.
Length = 315
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 318 KTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNS 440
K KV EN + S+ +P H S G +G P +++T S
Sbjct: 229 KHTKVHENEKKSQLSPEHDESSDSGNASIGTPTTDESLTFS 269
>AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger
protein REF-2 protein.
Length = 303
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 318 KTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNS 440
K KV EN + S+ +P H S G +G P +++T S
Sbjct: 217 KHTKVHENEKKSQLSPEHDESSDSGNASIGTPTTDESLTFS 257
>U61944-3|AAB03119.1| 818|Caenorhabditis elegans Hypothetical
protein T12E12.3 protein.
Length = 818
Score = 26.6 bits (56), Expect = 9.9
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 240 KSEGVRGAVIGIDLGTTNSC 299
++E +R A+I +D G TN+C
Sbjct: 799 RTEAIRKALIEVDFGPTNNC 818
>U51993-3|AAB36853.2| 958|Caenorhabditis elegans Hypothetical
protein F56F10.4 protein.
Length = 958
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -2
Query: 410 HSDQTLALFREGHMGGSRPRPFTVFHHLGCLALHDGNARV 291
H+ + A+F EG+ GG +H GC+ + N V
Sbjct: 19 HAIEQYAVFDEGNRGGFTSDVVAFDYHNGCVVIGSKNGEV 58
>U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical
protein F23F12.8 protein.
Length = 980
Score = 26.6 bits (56), Expect = 9.9
Identities = 16/53 (30%), Positives = 19/53 (35%), Gaps = 3/53 (5%)
Frame = +1
Query: 262 PSLESIWARQTRALPSWRARHPRW---WKTVKGLGRLPPMWPSRKRASVWSEC 411
P +ES R T P W P W W TV P + + V EC
Sbjct: 642 PDVESHMIRFTTQSPEWATPSPTWNPAWNTVTAEEETPGIPIIHSQCQVNGEC 694
>AF125967-1|AAD14759.1| 271|Caenorhabditis elegans Hypothetical
protein Y49G5B.1 protein.
Length = 271
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -1
Query: 393 RPLSRRPHGRESSETLHCF-PPPWV 322
RP+SR P R+ +E F PP WV
Sbjct: 230 RPMSRVPEDRKENEVSASFKPPSWV 254
>AC084158-7|AAK68560.1| 929|Caenorhabditis elegans Hypothetical
protein Y69A2AR.16 protein.
Length = 929
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 208 FTSDMAYNLETSLRVFVEPSLESIWARQTRALPSWR 315
F +MA NL TSL F + +R LP W+
Sbjct: 295 FMENMATNLHTSLAEFTAMATTGSTGDMSRRLPMWQ 330
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,274,215
Number of Sequences: 27780
Number of extensions: 272146
Number of successful extensions: 785
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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