Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28l02
         (495 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             27   0.11 
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   5.4  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   5.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   7.2  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 27.1 bits (57), Expect = 0.11
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
 Frame = +3

Query: 246  EGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENS--EGSRTTPSHVAFSKEGERLVGMPAK 419
            EGV   +     GT+NS  A    K P+ V     +GS    S +          G+P  
Sbjct: 1240 EGVGAGIAETSAGTSNSRGAAQMSKVPRDVSEGIYDGSGANGSFLDNLIRSSLETGIPRD 1299

Query: 420  RQAVTNSGN 446
            ++A+T + N
Sbjct: 1300 QRAMTEARN 1308


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 108 RMPASRSTSLSRIKILYYF 52
           R+PA RS  L  ++ L++F
Sbjct: 387 RLPAIRSIGLKCLEYLFFF 405


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 108 RMPASRSTSLSRIKILYYF 52
           R+PA RS  L  ++ L++F
Sbjct: 387 RLPAIRSIGLKCLEYLFFF 405


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 145 SELNPVHSKAFRPNARVAFNIFITY 71
           S +NPV    F P  R AF+  +++
Sbjct: 670 SFVNPVIYTVFNPEFRKAFHKLVSF 694


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,702
Number of Sequences: 438
Number of extensions: 3139
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)