Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28k24
(488 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC869.05c |||sulfate transporter |Schizosaccharomyces pombe|ch... 89 3e-19
SPBC3H7.02 |||sulfate transporter |Schizosaccharomyces pombe|chr... 88 8e-19
SPCC320.05 |||sulphate transporter |Schizosaccharomyces pombe|ch... 49 4e-07
SPAC26H5.09c |||GFO/IDH/MocA family oxidoreductase|Schizosacchar... 30 0.16
SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase Ubp9|Schizosac... 28 0.87
SPAC6F12.09 |rdp1|rdr1|RNA-directed RNA polymerase Rdp1|Schizosa... 28 0.87
SPAC24H6.11c |||sulfate transporter |Schizosaccharomyces pombe|c... 27 1.1
SPAC823.05c |tlg2||SNARE Tlg2|Schizosaccharomyces pombe|chr 1|||... 25 4.6
SPCC306.04c |set1||histone lysine methyltransferase Set1|Schizos... 25 4.6
SPBC19F5.05c |ppp1|SPBC25D12.01c|pescadillo-family BRCT domain p... 25 6.1
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 8.1
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 25 8.1
SPAC31G5.04 |||homoisocitrate dehydrogenase|Schizosaccharomyces ... 25 8.1
SPCC645.10 |||ATP|Schizosaccharomyces pombe|chr 3|||Manual 25 8.1
SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 25 8.1
SPAC12B10.11 |exg2||glucan 1,3-beta-glucosidase Exg2|Schizosacch... 25 8.1
>SPAC869.05c |||sulfate transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 840
Score = 89.0 bits (211), Expect = 3e-19
Identities = 45/126 (35%), Positives = 66/126 (52%), Gaps = 8/126 (6%)
Frame = +3
Query: 135 VKKRLPILEWAPQYDRLTAVADXXXXXXXXXXXXPQSIAYASLANLPVQYGLYSSFIGTM 314
+K PI+EW P Y+ + D PQ ++YA +A LP +YGLYSSF+G
Sbjct: 103 LKSLFPIIEWLPNYNPYWLINDLIAGITVGCVVVPQGMSYAKVATLPSEYGLYSSFVGVA 162
Query: 315 LYVILGTVKEVSIGPTSLMALFTLXICRELPI--------EFVVLLTFLSGCIVFVMGLL 470
+Y T K+VSIGP ++M+L T + + + L L+G I +GLL
Sbjct: 163 IYCFFATSKDVSIGPVAVMSLITAKVIANVMAKDETYTAPQIATCLALLAGAITCGIGLL 222
Query: 471 RLGFLV 488
RLGF++
Sbjct: 223 RLGFII 228
>SPBC3H7.02 |||sulfate transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 877
Score = 87.8 bits (208), Expect = 8e-19
Identities = 46/126 (36%), Positives = 67/126 (53%), Gaps = 8/126 (6%)
Frame = +3
Query: 135 VKKRLPILEWAPQYDRLTAVADXXXXXXXXXXXXPQSIAYASLANLPVQYGLYSSFIGTM 314
++ PI+ W P+Y+ V D PQ ++YA +A LP QYGLYSSF+G
Sbjct: 116 LRSLFPIMNWLPRYNWNWLVYDFIAGITVGCVVVPQGMSYAKVATLPAQYGLYSSFVGVA 175
Query: 315 LYVILGTVKEVSIGPTSLMALFTLXICREL--------PIEFVVLLTFLSGCIVFVMGLL 470
+Y I T K+VSIGP ++M+L T + + + L L+G I +GLL
Sbjct: 176 IYCIFATSKDVSIGPVAVMSLVTSKVIANVQAKDPNYDAAQIGTTLALLAGAITCGLGLL 235
Query: 471 RLGFLV 488
RLGF++
Sbjct: 236 RLGFII 241
>SPCC320.05 |||sulphate transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 667
Score = 48.8 bits (111), Expect = 4e-07
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 12/131 (9%)
Frame = +3
Query: 129 RLVKKRLPILEWAPQYDRLTAVADXXXXXXXXXXXXPQSIAYA-SLANLPVQYGLYSSFI 305
R + +P+L W P Y + D P ++++A + +P Y L + I
Sbjct: 57 RRINYYIPVLHWLPNYSLRNIIWDVLAGCSTACLSVPIALSFAQTFLGVPPIYILTGTAI 116
Query: 306 GTMLYVILGTVKEVSIGPTSLMALF-------TLXICRELPIEFVVLLT----FLSGCIV 452
G +LY + +SIGP + M L + ++P E +L+T F++G I
Sbjct: 117 GPILYCLFTACPLISIGPEAGMCLLIAENIHQRVLSKADVPQETAILVTGLIAFIAGIIN 176
Query: 453 FVMGLLRLGFL 485
GL RLGFL
Sbjct: 177 LAAGLFRLGFL 187
>SPAC26H5.09c |||GFO/IDH/MocA family
oxidoreductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 369
Score = 30.3 bits (65), Expect = 0.16
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -1
Query: 236 HQGKAQRDPGHQVRHGRQAVVLWSPLQDRQSLLH--KPTPSAVLFIARRQRESVVHIHHS 63
++G + DPG+ V LW+ L + H KPT S ++ IA R + +H +
Sbjct: 272 NEGMSPMDPGYGVDSSHHYATLWT-LPPDIDVRHPPKPTKSTLMTIAGDYRRFYLEVHEA 330
Query: 62 VLVRS 48
++ ++
Sbjct: 331 LVTKT 335
>SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase
Ubp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 585
Score = 27.9 bits (59), Expect = 0.87
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -2
Query: 478 PNLKSPITKTIHPERNVS--STTNSMGSSRQX*RVNSAIKLVGPIDTS 341
PN KS TKT HPE + S S SM + + ++ I G +D S
Sbjct: 79 PNFKSVCTKTNHPESSSSRHSKKKSMENRKSSLYGSNGINSCGCVDIS 126
>SPAC6F12.09 |rdp1|rdr1|RNA-directed RNA polymerase
Rdp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1215
Score = 27.9 bits (59), Expect = 0.87
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = -2
Query: 349 DTSLTVPRMTYSIVPIKEEYNPY*TGKLARDAYAMLCGTRVRPSVTPA-TKSATAVR 182
D L+VP + I + Y TGKL LC PS+ P + AVR
Sbjct: 814 DAVLSVPEIFIQITDTSTSFGSYSTGKLKTRVIVGLCIVARNPSLHPGDVRVCKAVR 870
>SPAC24H6.11c |||sulfate transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 958
Score = 27.5 bits (58), Expect = 1.1
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +3
Query: 300 FIGTMLYVILGTVKEVSIGPTSLMALFTLXICRELPIEFVVLLTFLSGCIVFVMGLLRLG 479
F + + IL V E + P S++A L C L + L+G + F++G+LRLG
Sbjct: 233 FFHQIAFTILNRVGEDN--PKSVIATTILAYC---------LSSILTGLVFFILGILRLG 281
Query: 480 FLV 488
L+
Sbjct: 282 RLI 284
>SPAC823.05c |tlg2||SNARE Tlg2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 301
Score = 25.4 bits (53), Expect = 4.6
Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = -1
Query: 194 HGRQAVVL-WSPLQDRQSLLHK 132
HG++ + W P ++RQSL+HK
Sbjct: 20 HGQRLELSGWDPKEERQSLVHK 41
>SPCC306.04c |set1||histone lysine methyltransferase
Set1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 920
Score = 25.4 bits (53), Expect = 4.6
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = -1
Query: 347 HLFDCTQDDVQHCTDKRRIQSILNR*VSEGCVCNALRHQGK 225
+LF +D + T K I +N + C+ +R +GK
Sbjct: 836 YLFRIDEDVIVDATKKGNIARFINHSCAPNCIARIIRVEGK 876
>SPBC19F5.05c |ppp1|SPBC25D12.01c|pescadillo-family BRCT domain
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 607
Score = 25.0 bits (52), Expect = 6.1
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +3
Query: 336 VKEVSIGPTSLMALFTLXICRELP---IEFVV 422
V +S TSL + FT + RE+P +EFV+
Sbjct: 342 VSHISSSNTSLFSNFTFFLSREVPRFSLEFVI 373
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 24.6 bits (51), Expect = 8.1
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -2
Query: 208 ATKSATAVRRSYCGAHSKIGSLFFTSRRQVRFCLSLVVSGSPSST 74
++ SATA+ S + S + S FTS F SLV S S S+
Sbjct: 50 SSSSATAISSS--SSSSPLSSSSFTSPASSSFITSLVSSSSQQSS 92
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 24.6 bits (51), Expect = 8.1
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +3
Query: 96 TTSDKQNRTWRRLVKKRLPILEWAPQYDRL 185
++++K+ + K+R P+LEW + D L
Sbjct: 1578 SSAEKRALLRAKSAKQRFPVLEWISKLDHL 1607
>SPAC31G5.04 |||homoisocitrate dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 362
Score = 24.6 bits (51), Expect = 8.1
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = -2
Query: 214 TPATKSATAVRRSYCGAHSKIGSLFF---TSRRQVRFCLSLVVSGSPSSTFI 68
TP + A A+RR A +KIG + F SR+++R + + P T I
Sbjct: 143 TPGKRVAEAIRRISEEASTKIGKMAFEIAKSRQKIRESGTYSIHKKPLVTII 194
>SPCC645.10 |||ATP|Schizosaccharomyces pombe|chr 3|||Manual
Length = 484
Score = 24.6 bits (51), Expect = 8.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 223 PSVTPATKSATAVRRSYCGAHSKIGSLFFTSRRQ 122
PSVTP T A+RR + + +LFF R +
Sbjct: 133 PSVTPGTVETDALRRDF-----TVNTLFFNIRTE 161
>SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 468
Score = 24.6 bits (51), Expect = 8.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 205 WPGSRWALPWCRRALHTHPSLTYL 276
W + P CR+ L+T PS YL
Sbjct: 112 WLKESKSCPTCRQKLYTQPSPAYL 135
>SPAC12B10.11 |exg2||glucan 1,3-beta-glucosidase
Exg2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 570
Score = 24.6 bits (51), Expect = 8.1
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = +3
Query: 378 FTLXICRELP---IEFVVLLTFLSGCIVFVMGLLRLGFLV 488
FT CRE+ + +LLTF VF+ +L L FLV
Sbjct: 21 FTSKRCREIDKKALLITILLTFFVSLCVFLSIILPLIFLV 60
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,985,223
Number of Sequences: 5004
Number of extensions: 36894
Number of successful extensions: 117
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 114
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 190087364
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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