Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28k19
         (588 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052147-1|AAK93571.1|  531|Drosophila melanogaster SD10674p pro...    31   1.5  
AE014296-2747|AAG22318.1|  531|Drosophila melanogaster CG32158-P...    31   1.5  
AE014296-2746|AAG22317.1|  533|Drosophila melanogaster CG32158-P...    31   1.5  
AE014296-2745|AAF49456.1|  533|Drosophila melanogaster CG32158-P...    31   1.5  
BT011024-1|AAR30184.1|  599|Drosophila melanogaster RE46682p pro...    30   2.7  
AE014298-2048|AAF48383.1|  599|Drosophila melanogaster CG15890-P...    30   2.7  

>AY052147-1|AAK93571.1|  531|Drosophila melanogaster SD10674p
           protein.
          Length = 531

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/36 (33%), Positives = 24/36 (66%)
 Frame = +2

Query: 476 KIILKQIKYVLRETTVEPCLFMYMMCTSISSLAVQS 583
           + +L+   +V++ T+VEP +F+YM    I+S+  Q+
Sbjct: 42  RTVLQWAWHVVKSTSVEPTMFLYMFAFMITSVVEQN 77


>AE014296-2747|AAG22318.1|  531|Drosophila melanogaster CG32158-PD,
           isoform D protein.
          Length = 531

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/36 (33%), Positives = 24/36 (66%)
 Frame = +2

Query: 476 KIILKQIKYVLRETTVEPCLFMYMMCTSISSLAVQS 583
           + +L+   +V++ T+VEP +F+YM    I+S+  Q+
Sbjct: 42  RTVLQWAWHVVKSTSVEPTMFLYMFAFMITSVVEQN 77


>AE014296-2746|AAG22317.1|  533|Drosophila melanogaster CG32158-PE,
           isoform E protein.
          Length = 533

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/36 (33%), Positives = 24/36 (66%)
 Frame = +2

Query: 476 KIILKQIKYVLRETTVEPCLFMYMMCTSISSLAVQS 583
           + +L+   +V++ T+VEP +F+YM    I+S+  Q+
Sbjct: 44  RTVLQWAWHVVKSTSVEPTMFLYMFAFMITSVVEQN 79


>AE014296-2745|AAF49456.1|  533|Drosophila melanogaster CG32158-PC,
           isoform C protein.
          Length = 533

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/36 (33%), Positives = 24/36 (66%)
 Frame = +2

Query: 476 KIILKQIKYVLRETTVEPCLFMYMMCTSISSLAVQS 583
           + +L+   +V++ T+VEP +F+YM    I+S+  Q+
Sbjct: 44  RTVLQWAWHVVKSTSVEPTMFLYMFAFMITSVVEQN 79


>BT011024-1|AAR30184.1|  599|Drosophila melanogaster RE46682p
           protein.
          Length = 599

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +2

Query: 461 WREKSKIILKQIKYVLRETTVEPCLFMYMMCTSISSLAVQSM 586
           WREK       I+ V    TVEP L  Y+M + +S+LA Q++
Sbjct: 59  WREK-------IRLVANNVTVEPILAAYIMPSVLSNLATQNL 93


>AE014298-2048|AAF48383.1|  599|Drosophila melanogaster CG15890-PA
           protein.
          Length = 599

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +2

Query: 461 WREKSKIILKQIKYVLRETTVEPCLFMYMMCTSISSLAVQSM 586
           WREK       I+ V    TVEP L  Y+M + +S+LA Q++
Sbjct: 59  WREK-------IRLVANNVTVEPILAAYIMPSVLSNLATQNL 93


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,620,296
Number of Sequences: 53049
Number of extensions: 374749
Number of successful extensions: 726
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2358819486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)