Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28j21
         (508 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   2.4  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    22   4.2  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    22   4.2  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   4.2  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.7  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   9.7  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 398 FTMFLTLFGERLQGTDPEDVIKNA 469
           FT+ +T+ GE  +GT P   +  A
Sbjct: 182 FTISVTIDGETFEGTGPSKKLAKA 205


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 34  STILICRHTRLNKFAL 81
           S  L+C  TRLNK A+
Sbjct: 64  SLSLLCADTRLNKLAV 79


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 43  LICRHTRLNKFAL 81
           L+C  TRLNK A+
Sbjct: 66  LVCADTRLNKLAV 78


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 251 FKEAFNMIDQNRDGF 295
           F++A  M+D+N +GF
Sbjct: 220 FQKALRMVDENINGF 234


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +1

Query: 241 NSRVQGGFQYD 273
           NSR+ GG+++D
Sbjct: 633 NSRIWGGYKFD 643


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +1

Query: 241 NSRVQGGFQYD 273
           NSR+ GG+++D
Sbjct: 633 NSRIWGGYKFD 643


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 10/44 (22%), Positives = 20/44 (45%)
 Frame = +2

Query: 179 INKKRAQRATSNVFAMFDQAQIAEFKEAFNMIDQNRDGFIDKDD 310
           +NK+ A R  S +      + +A+F +  +      + F+  DD
Sbjct: 109 VNKEYAIRGNSAILKCVVPSFVADFVKVLSWHTDQGEEFVPGDD 152


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,030
Number of Sequences: 438
Number of extensions: 2630
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)