Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28j14
         (610 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC005336-1|AAH05336.1|  165|Homo sapiens asparagine-linked glyco...   141   2e-33
AL096764-3|CAB89277.1|  165|Homo sapiens asparagine-linked glyco...   141   2e-33
AF220051-1|AAF67644.1|  165|Homo sapiens uncharacterized hematop...   141   2e-33
AL096764-2|CAM28218.1| 1137|Homo sapiens chromosome X open readi...   122   8e-28
AL049563-1|CAM28289.1| 1137|Homo sapiens chromosome X open readi...   122   8e-28

>BC005336-1|AAH05336.1|  165|Homo sapiens asparagine-linked
           glycosylation 13 homolog (S. cerevisiae) protein.
          Length = 165

 Score =  141 bits (342), Expect = 2e-33
 Identities = 68/162 (41%), Positives = 94/162 (58%)
 Frame = +2

Query: 107 IFITVGTTRFDLLCEYMLSPAVIHALKEIGCKEVVIQIGNSDVDPGNFTKNEIKFTLYRF 286
           +F+TVGTT FD L   + +P  +  ++ +G   +++QIG   V P  F+       +YR+
Sbjct: 4   VFVTVGTTSFDDLIACVSAPDSLQKIESLGYNRLILQIGRGTVVPEPFSTESFTLDVYRY 63

Query: 287 KDSILEDIKKADLVISHAGAGSCXXXXXXXXXXXXXXXXDLMDNHQLELAEQLQIDGHLY 466
           KDS+ EDI+KADLVISHAGAGSC                 LM+NHQLELA+QL  +GHL+
Sbjct: 64  KDSLKEDIQKADLVISHAGAGSCLETLEKGKPLVVVINEKLMNNHQLELAKQLHKEGHLF 123

Query: 467 YCTCDTLVNTLNVVDFELLRPFPKANPILFVRYLDDIFXVYK 592
           YCTC TL   L  +D   L+ +P   P  F  +LD +  + K
Sbjct: 124 YCTCSTLPGLLQSMDLSTLKCYPPGQPEKFSAFLDKVVGLQK 165


>AL096764-3|CAB89277.1|  165|Homo sapiens asparagine-linked
           glycosylation 13 homolog (S. cerevisiae) protein.
          Length = 165

 Score =  141 bits (342), Expect = 2e-33
 Identities = 68/162 (41%), Positives = 94/162 (58%)
 Frame = +2

Query: 107 IFITVGTTRFDLLCEYMLSPAVIHALKEIGCKEVVIQIGNSDVDPGNFTKNEIKFTLYRF 286
           +F+TVGTT FD L   + +P  +  ++ +G   +++QIG   V P  F+       +YR+
Sbjct: 4   VFVTVGTTSFDDLIACVSAPDSLQKIESLGYNRLILQIGRGTVVPEPFSTESFTLDVYRY 63

Query: 287 KDSILEDIKKADLVISHAGAGSCXXXXXXXXXXXXXXXXDLMDNHQLELAEQLQIDGHLY 466
           KDS+ EDI+KADLVISHAGAGSC                 LM+NHQLELA+QL  +GHL+
Sbjct: 64  KDSLKEDIQKADLVISHAGAGSCLETLEKGKPLVVVINEKLMNNHQLELAKQLHKEGHLF 123

Query: 467 YCTCDTLVNTLNVVDFELLRPFPKANPILFVRYLDDIFXVYK 592
           YCTC TL   L  +D   L+ +P   P  F  +LD +  + K
Sbjct: 124 YCTCSTLPGLLQSMDLSTLKCYPPGQPEKFSAFLDKVVGLQK 165


>AF220051-1|AAF67644.1|  165|Homo sapiens uncharacterized
           hematopoietic stem/progenitor cells protein MDS031
           protein.
          Length = 165

 Score =  141 bits (342), Expect = 2e-33
 Identities = 68/162 (41%), Positives = 94/162 (58%)
 Frame = +2

Query: 107 IFITVGTTRFDLLCEYMLSPAVIHALKEIGCKEVVIQIGNSDVDPGNFTKNEIKFTLYRF 286
           +F+TVGTT FD L   + +P  +  ++ +G   +++QIG   V P  F+       +YR+
Sbjct: 4   VFVTVGTTSFDDLIACVSAPDSLQKIESLGYNRLILQIGRGTVVPEPFSTESFTLDVYRY 63

Query: 287 KDSILEDIKKADLVISHAGAGSCXXXXXXXXXXXXXXXXDLMDNHQLELAEQLQIDGHLY 466
           KDS+ EDI+KADLVISHAGAGSC                 LM+NHQLELA+QL  +GHL+
Sbjct: 64  KDSLKEDIQKADLVISHAGAGSCLETLEKGKPLVVVINEKLMNNHQLELAKQLHKEGHLF 123

Query: 467 YCTCDTLVNTLNVVDFELLRPFPKANPILFVRYLDDIFXVYK 592
           YCTC TL   L  +D   L+ +P   P  F  +LD +  + K
Sbjct: 124 YCTCSTLPGLLQSMDLSTLKCYPPGQPEKFSAFLDKVVGLQK 165


>AL096764-2|CAM28218.1| 1137|Homo sapiens chromosome X open reading
           frame 45 protein.
          Length = 1137

 Score =  122 bits (295), Expect = 8e-28
 Identities = 58/127 (45%), Positives = 78/127 (61%)
 Frame = +2

Query: 107 IFITVGTTRFDLLCEYMLSPAVIHALKEIGCKEVVIQIGNSDVDPGNFTKNEIKFTLYRF 286
           +F+TVGTT FD L   + +P  +  ++ +G   +++QIG   V P  F+       +YR+
Sbjct: 4   VFVTVGTTSFDDLIACVSAPDSLQKIESLGYNRLILQIGRGTVVPEPFSTESFTLDVYRY 63

Query: 287 KDSILEDIKKADLVISHAGAGSCXXXXXXXXXXXXXXXXDLMDNHQLELAEQLQIDGHLY 466
           KDS+ EDI+KADLVISHAGAGSC                 LM+NHQLELA+QL  +GHL+
Sbjct: 64  KDSLKEDIQKADLVISHAGAGSCLETLEKGKPLVVVINEKLMNNHQLELAKQLHKEGHLF 123

Query: 467 YCTCDTL 487
           YCTC  L
Sbjct: 124 YCTCRVL 130


>AL049563-1|CAM28289.1| 1137|Homo sapiens chromosome X open reading
           frame 45 protein.
          Length = 1137

 Score =  122 bits (295), Expect = 8e-28
 Identities = 58/127 (45%), Positives = 78/127 (61%)
 Frame = +2

Query: 107 IFITVGTTRFDLLCEYMLSPAVIHALKEIGCKEVVIQIGNSDVDPGNFTKNEIKFTLYRF 286
           +F+TVGTT FD L   + +P  +  ++ +G   +++QIG   V P  F+       +YR+
Sbjct: 4   VFVTVGTTSFDDLIACVSAPDSLQKIESLGYNRLILQIGRGTVVPEPFSTESFTLDVYRY 63

Query: 287 KDSILEDIKKADLVISHAGAGSCXXXXXXXXXXXXXXXXDLMDNHQLELAEQLQIDGHLY 466
           KDS+ EDI+KADLVISHAGAGSC                 LM+NHQLELA+QL  +GHL+
Sbjct: 64  KDSLKEDIQKADLVISHAGAGSCLETLEKGKPLVVVINEKLMNNHQLELAKQLHKEGHLF 123

Query: 467 YCTCDTL 487
           YCTC  L
Sbjct: 124 YCTCRVL 130


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,944,177
Number of Sequences: 237096
Number of extensions: 1262737
Number of successful extensions: 2791
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2786
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)