Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28j13
(452 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR533491-1|CAG38522.1| 180|Homo sapiens MRPL18 protein. 92 9e-19
BC001623-1|AAH01623.1| 180|Homo sapiens mitochondrial ribosomal... 92 9e-19
AL139045-3|CAI19751.1| 180|Homo sapiens mitochondrial ribosomal... 92 9e-19
AL135914-8|CAI21852.1| 180|Homo sapiens mitochondrial ribosomal... 92 9e-19
AL669894-1|CAI13317.1| 879|Homo sapiens chromosome 9 open readi... 29 7.4
AL358815-1|CAI15128.1| 879|Homo sapiens chromosome 9 open readi... 29 7.4
AL354797-2|CAI39466.1| 879|Homo sapiens chromosome 9 open readi... 29 7.4
AF153415-1|AAG43365.1| 911|Homo sapiens chromosome 9 open readi... 29 7.4
DQ314885-1|ABC40744.1| 273|Homo sapiens oxidised low density li... 29 9.8
BC139744-1|AAI39745.1| 140|Homo sapiens FLJ43582 protein protein. 29 9.8
BC022295-1|AAH22295.1| 273|Homo sapiens oxidized low density li... 29 9.8
AJ131757-1|CAB38175.1| 273|Homo sapiens LOX1 protein. 29 9.8
AF079167-1|AAC97927.1| 273|Homo sapiens lectin-type oxidized LD... 29 9.8
AF035776-1|AAC82329.1| 273|Homo sapiens oxidized low-density li... 29 9.8
AB102861-1|BAC81565.1| 273|Homo sapiens oxidised low density li... 29 9.8
AB010710-1|BAA24580.1| 273|Homo sapiens lectin-like oxidized LD... 29 9.8
>CR533491-1|CAG38522.1| 180|Homo sapiens MRPL18 protein.
Length = 180
Score = 91.9 bits (218), Expect = 9e-19
Identities = 45/98 (45%), Positives = 59/98 (60%)
Frame = +1
Query: 148 EFVNRNPRNLERMRIARKPDGYHLEKPGRKYWHKLVLTPGNRSIIAKVIHFLNGPVVEVK 327
EF NRNPRNLE + +ARK G+ P R++WH+L + + A V H VV
Sbjct: 47 EFTNRNPRNLELLSVARKERGWRTVFPSREFWHRLRVIRTQHHVEALVEHQNGKVVVSAS 106
Query: 328 TSEWALQKQLYSPTDTCAYISLGKVLAQRCIEFGITEM 441
T EWA++K LYS + A S+G+VLAQRC+E GI M
Sbjct: 107 TREWAIKKHLYSTRNVVACESIGRVLAQRCLEAGINFM 144
>BC001623-1|AAH01623.1| 180|Homo sapiens mitochondrial ribosomal
protein L18 protein.
Length = 180
Score = 91.9 bits (218), Expect = 9e-19
Identities = 45/98 (45%), Positives = 59/98 (60%)
Frame = +1
Query: 148 EFVNRNPRNLERMRIARKPDGYHLEKPGRKYWHKLVLTPGNRSIIAKVIHFLNGPVVEVK 327
EF NRNPRNLE + +ARK G+ P R++WH+L + + A V H VV
Sbjct: 47 EFTNRNPRNLELLSVARKERGWRTVFPSREFWHRLRVIRTQHHVEALVEHQNGKVVVSAS 106
Query: 328 TSEWALQKQLYSPTDTCAYISLGKVLAQRCIEFGITEM 441
T EWA++K LYS + A S+G+VLAQRC+E GI M
Sbjct: 107 TREWAIKKHLYSTRNVVACESIGRVLAQRCLEAGINFM 144
>AL139045-3|CAI19751.1| 180|Homo sapiens mitochondrial ribosomal
protein L18 protein.
Length = 180
Score = 91.9 bits (218), Expect = 9e-19
Identities = 45/98 (45%), Positives = 59/98 (60%)
Frame = +1
Query: 148 EFVNRNPRNLERMRIARKPDGYHLEKPGRKYWHKLVLTPGNRSIIAKVIHFLNGPVVEVK 327
EF NRNPRNLE + +ARK G+ P R++WH+L + + A V H VV
Sbjct: 47 EFTNRNPRNLELLSVARKERGWRTVFPSREFWHRLRVIRTQHHVEALVEHQNGKVVVSAS 106
Query: 328 TSEWALQKQLYSPTDTCAYISLGKVLAQRCIEFGITEM 441
T EWA++K LYS + A S+G+VLAQRC+E GI M
Sbjct: 107 TREWAIKKHLYSTRNVVACESIGRVLAQRCLEAGINFM 144
>AL135914-8|CAI21852.1| 180|Homo sapiens mitochondrial ribosomal
protein L18 protein.
Length = 180
Score = 91.9 bits (218), Expect = 9e-19
Identities = 45/98 (45%), Positives = 59/98 (60%)
Frame = +1
Query: 148 EFVNRNPRNLERMRIARKPDGYHLEKPGRKYWHKLVLTPGNRSIIAKVIHFLNGPVVEVK 327
EF NRNPRNLE + +ARK G+ P R++WH+L + + A V H VV
Sbjct: 47 EFTNRNPRNLELLSVARKERGWRTVFPSREFWHRLRVIRTQHHVEALVEHQNGKVVVSAS 106
Query: 328 TSEWALQKQLYSPTDTCAYISLGKVLAQRCIEFGITEM 441
T EWA++K LYS + A S+G+VLAQRC+E GI M
Sbjct: 107 TREWAIKKHLYSTRNVVACESIGRVLAQRCLEAGINFM 144
>AL669894-1|CAI13317.1| 879|Homo sapiens chromosome 9 open reading
frame 5 protein.
Length = 879
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/56 (23%), Positives = 29/56 (51%)
Frame = -2
Query: 169 LDFDLRIQHWLSNSILSFVERMVLS**NSFLYQEKVVSKIVLIFVTVLSLHNNS*H 2
L D ++ HWL+ ++ ++E+M+ + F+ V+ ++L + +H S H
Sbjct: 435 LKVDSKLWHWLNKKMIIWLEKMLDKIISIFIIFLLVIGTLLLALLLTAKVHQESVH 490
>AL358815-1|CAI15128.1| 879|Homo sapiens chromosome 9 open reading
frame 5 protein.
Length = 879
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/56 (23%), Positives = 29/56 (51%)
Frame = -2
Query: 169 LDFDLRIQHWLSNSILSFVERMVLS**NSFLYQEKVVSKIVLIFVTVLSLHNNS*H 2
L D ++ HWL+ ++ ++E+M+ + F+ V+ ++L + +H S H
Sbjct: 435 LKVDSKLWHWLNKKMIIWLEKMLDKIISIFIIFLLVIGTLLLALLLTAKVHQESVH 490
>AL354797-2|CAI39466.1| 879|Homo sapiens chromosome 9 open reading
frame 5 protein.
Length = 879
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/56 (23%), Positives = 29/56 (51%)
Frame = -2
Query: 169 LDFDLRIQHWLSNSILSFVERMVLS**NSFLYQEKVVSKIVLIFVTVLSLHNNS*H 2
L D ++ HWL+ ++ ++E+M+ + F+ V+ ++L + +H S H
Sbjct: 435 LKVDSKLWHWLNKKMIIWLEKMLDKIISIFIIFLLVIGTLLLALLLTAKVHQESVH 490
>AF153415-1|AAG43365.1| 911|Homo sapiens chromosome 9 open reading
frame 5 protein.
Length = 911
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/56 (23%), Positives = 29/56 (51%)
Frame = -2
Query: 169 LDFDLRIQHWLSNSILSFVERMVLS**NSFLYQEKVVSKIVLIFVTVLSLHNNS*H 2
L D ++ HWL+ ++ ++E+M+ + F+ V+ ++L + +H S H
Sbjct: 435 LKVDSKLWHWLNKKMIIWLEKMLDKIISIFIIFLLVIGTLLLALLLTAKVHQESVH 490
>DQ314885-1|ABC40744.1| 273|Homo sapiens oxidised low density
lipoprotein (lectin-like) receptor 1 protein.
Length = 273
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 364 PTDTCAYISLGKVLAQRCI 420
P+ TCAYI G V A+ CI
Sbjct: 239 PSGTCAYIQRGAVYAENCI 257
>BC139744-1|AAI39745.1| 140|Homo sapiens FLJ43582 protein protein.
Length = 140
Score = 28.7 bits (61), Expect = 9.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 376 RYLWGCIIVSVMPTLKSSPPQ 314
R LWGC++ P L +PPQ
Sbjct: 88 RLLWGCLMPRAQPLLHVTPPQ 108
>BC022295-1|AAH22295.1| 273|Homo sapiens oxidized low density
lipoprotein (lectin-like) receptor 1 protein.
Length = 273
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 364 PTDTCAYISLGKVLAQRCI 420
P+ TCAYI G V A+ CI
Sbjct: 239 PSGTCAYIQRGAVYAENCI 257
>AJ131757-1|CAB38175.1| 273|Homo sapiens LOX1 protein.
Length = 273
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 364 PTDTCAYISLGKVLAQRCI 420
P+ TCAYI G V A+ CI
Sbjct: 239 PSGTCAYIQRGAVYAENCI 257
>AF079167-1|AAC97927.1| 273|Homo sapiens lectin-type oxidized LDL
receptor protein.
Length = 273
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 364 PTDTCAYISLGKVLAQRCI 420
P+ TCAYI G V A+ CI
Sbjct: 239 PSGTCAYIQRGAVYAENCI 257
>AF035776-1|AAC82329.1| 273|Homo sapiens oxidized low-density
lipoprotein receptor protein.
Length = 273
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 364 PTDTCAYISLGKVLAQRCI 420
P+ TCAYI G V A+ CI
Sbjct: 239 PSGTCAYIQRGAVYAENCI 257
>AB102861-1|BAC81565.1| 273|Homo sapiens oxidised low density
lipoprotein (lectin-like) receptor 1 protein.
Length = 273
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 364 PTDTCAYISLGKVLAQRCI 420
P+ TCAYI G V A+ CI
Sbjct: 239 PSGTCAYIQRGAVYAENCI 257
>AB010710-1|BAA24580.1| 273|Homo sapiens lectin-like oxidized LDL
receptor protein.
Length = 273
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 364 PTDTCAYISLGKVLAQRCI 420
P+ TCAYI G V A+ CI
Sbjct: 239 PSGTCAYIQRGAVYAENCI 257
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,856,917
Number of Sequences: 237096
Number of extensions: 1321747
Number of successful extensions: 2387
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2387
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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