Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28j10
(589 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK021811-1|BAB13901.1| 201|Homo sapiens protein ( Homo sapiens ... 115 1e-25
CR457284-1|CAG33565.1| 201|Homo sapiens FLJ11749 protein. 115 1e-25
BC010108-1|AAH10108.1| 201|Homo sapiens chromatin modifying pro... 115 1e-25
AY329087-1|AAQ91196.1| 201|Homo sapiens VPS20 protein. 115 1e-25
AK223187-1|BAD96907.1| 201|Homo sapiens hypothetical protein FL... 112 1e-24
BC014321-1|AAH14321.1| 233|Homo sapiens chromatin modifying pro... 36 0.14
AY329086-1|AAQ91195.1| 233|Homo sapiens SNF7-3 protein. 36 0.14
AB120734-1|BAC87888.1| 233|Homo sapiens Snf7 homologue associat... 36 0.14
U55054-1|AAC50563.1| 1085|Homo sapiens K-Cl cotransporter protein. 31 3.0
BC021193-1|AAH21193.1| 1085|Homo sapiens solute carrier family 1... 31 3.0
AF054506-1|AAC39685.1| 1068|Homo sapiens erythroid K:Cl cotransp... 31 3.0
AF054505-1|AAC39684.1| 1011|Homo sapiens erythroid K:Cl cotransp... 31 3.0
AF047338-1|AAC32815.1| 1085|Homo sapiens erythroid K:Cl cotransp... 31 3.0
>AK021811-1|BAB13901.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ11749 fis, clone HEMBA1005558, weakly similar to
NUCLEAR PROTEIN SNF7. ).
Length = 201
Score = 115 bits (277), Expect = 1e-25
Identities = 54/141 (38%), Positives = 89/141 (63%)
Frame = +2
Query: 158 MGALFGKHKKVVSRVTEQDKAVXXXXXXXXXXXXXXXXIELNLEKDRKLAKKLLEEGKRD 337
MG LFG+ K+ SRVTEQDKA+ I LE++R LA++LL +G+++
Sbjct: 1 MGNLFGRKKQ--SRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGRKE 58
Query: 338 RAXXXXXXXXYQENLLHNTDTQLEKLEQLTHDLEFAQIEIQVLDGLKTGNVALKKVHDIL 517
RA YQE LL T+ Q+ LE + +EF QIE++V++GL+ GN L K+H ++
Sbjct: 59 RAKLLLKKKRYQEQLLDRTENQISSLEAMVQSIEFTQIEMKVMEGLQLGNECLNKMHQVM 118
Query: 518 NIDEIEKIMEESREGIDQPKR 580
+I+E+E+I++E++E ++ ++
Sbjct: 119 SIEEVERILDETQEAVEYQRQ 139
>CR457284-1|CAG33565.1| 201|Homo sapiens FLJ11749 protein.
Length = 201
Score = 115 bits (276), Expect = 1e-25
Identities = 54/141 (38%), Positives = 89/141 (63%)
Frame = +2
Query: 158 MGALFGKHKKVVSRVTEQDKAVXXXXXXXXXXXXXXXXIELNLEKDRKLAKKLLEEGKRD 337
MG LFG+ K+ SRVTEQDKA+ I LE++R LA++LL +G+++
Sbjct: 1 MGNLFGRKKQ--SRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGRKE 58
Query: 338 RAXXXXXXXXYQENLLHNTDTQLEKLEQLTHDLEFAQIEIQVLDGLKTGNVALKKVHDIL 517
RA YQE LL T+ Q+ LE + +EF QIE++V++GL+ GN L K+H ++
Sbjct: 59 RAKLLLKKKRYQEQLLDRTENQISSLEAMVQSIEFTQIEMKVMEGLQFGNECLNKMHQVM 118
Query: 518 NIDEIEKIMEESREGIDQPKR 580
+I+E+E+I++E++E ++ ++
Sbjct: 119 SIEEVERILDETQEAVEYQRQ 139
>BC010108-1|AAH10108.1| 201|Homo sapiens chromatin modifying
protein 6 protein.
Length = 201
Score = 115 bits (276), Expect = 1e-25
Identities = 54/141 (38%), Positives = 89/141 (63%)
Frame = +2
Query: 158 MGALFGKHKKVVSRVTEQDKAVXXXXXXXXXXXXXXXXIELNLEKDRKLAKKLLEEGKRD 337
MG LFG+ K+ SRVTEQDKA+ I LE++R LA++LL +G+++
Sbjct: 1 MGNLFGRKKQ--SRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGRKE 58
Query: 338 RAXXXXXXXXYQENLLHNTDTQLEKLEQLTHDLEFAQIEIQVLDGLKTGNVALKKVHDIL 517
RA YQE LL T+ Q+ LE + +EF QIE++V++GL+ GN L K+H ++
Sbjct: 59 RAKLLLKKKRYQEQLLDRTENQISSLEAMVQSIEFTQIEMKVMEGLQFGNECLNKMHQVM 118
Query: 518 NIDEIEKIMEESREGIDQPKR 580
+I+E+E+I++E++E ++ ++
Sbjct: 119 SIEEVERILDETQEAVEYQRQ 139
>AY329087-1|AAQ91196.1| 201|Homo sapiens VPS20 protein.
Length = 201
Score = 115 bits (276), Expect = 1e-25
Identities = 54/141 (38%), Positives = 89/141 (63%)
Frame = +2
Query: 158 MGALFGKHKKVVSRVTEQDKAVXXXXXXXXXXXXXXXXIELNLEKDRKLAKKLLEEGKRD 337
MG LFG+ K+ SRVTEQDKA+ I LE++R LA++LL +G+++
Sbjct: 1 MGNLFGRKKQ--SRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGRKE 58
Query: 338 RAXXXXXXXXYQENLLHNTDTQLEKLEQLTHDLEFAQIEIQVLDGLKTGNVALKKVHDIL 517
RA YQE LL T+ Q+ LE + +EF QIE++V++GL+ GN L K+H ++
Sbjct: 59 RAKLLLKKKRYQEQLLDRTENQISSLEAMVQSIEFTQIEMKVMEGLQFGNECLNKMHQVM 118
Query: 518 NIDEIEKIMEESREGIDQPKR 580
+I+E+E+I++E++E ++ ++
Sbjct: 119 SIEEVERILDETQEAVEYQRQ 139
>AK223187-1|BAD96907.1| 201|Homo sapiens hypothetical protein
FLJ11749 variant protein.
Length = 201
Score = 112 bits (269), Expect = 1e-24
Identities = 53/141 (37%), Positives = 88/141 (62%)
Frame = +2
Query: 158 MGALFGKHKKVVSRVTEQDKAVXXXXXXXXXXXXXXXXIELNLEKDRKLAKKLLEEGKRD 337
MG LFG+ K+ SRVTEQ KA+ I LE++R LA++LL +G+++
Sbjct: 1 MGNLFGRKKQ--SRVTEQGKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGRKE 58
Query: 338 RAXXXXXXXXYQENLLHNTDTQLEKLEQLTHDLEFAQIEIQVLDGLKTGNVALKKVHDIL 517
RA YQE LL T+ Q+ LE + +EF QIE++V++GL+ GN L K+H ++
Sbjct: 59 RAKLLLKKKRYQEQLLDRTENQISSLEAMVQSIEFTQIEMKVMEGLQFGNECLNKMHQVM 118
Query: 518 NIDEIEKIMEESREGIDQPKR 580
+I+E+E+I++E++E ++ ++
Sbjct: 119 SIEEVERILDETQEAVEYQRQ 139
>BC014321-1|AAH14321.1| 233|Homo sapiens chromatin modifying
protein 4C protein.
Length = 233
Score = 35.5 bits (78), Expect = 0.14
Identities = 24/99 (24%), Positives = 47/99 (47%)
Frame = +2
Query: 272 IELNLEKDRKLAKKLLEEGKRDRAXXXXXXXXYQENLLHNTDTQLEKLEQLTHDLEFAQI 451
+E ++++ LAKK + KR +++ L D L +E LE +
Sbjct: 43 LENRIQREIALAKKHGTQNKRAALQALKRKKRFEKQLTQ-IDGTLSTIEFQREALENSHT 101
Query: 452 EIQVLDGLKTGNVALKKVHDILNIDEIEKIMEESREGID 568
+VL + A+K VH+ +++++I+ +M+E E D
Sbjct: 102 NTEVLRNMGFAAKAMKSVHENMDLNKIDDLMQEITEQQD 140
>AY329086-1|AAQ91195.1| 233|Homo sapiens SNF7-3 protein.
Length = 233
Score = 35.5 bits (78), Expect = 0.14
Identities = 24/99 (24%), Positives = 47/99 (47%)
Frame = +2
Query: 272 IELNLEKDRKLAKKLLEEGKRDRAXXXXXXXXYQENLLHNTDTQLEKLEQLTHDLEFAQI 451
+E ++++ LAKK + KR +++ L D L +E LE +
Sbjct: 43 LENRIQREIALAKKHGTQNKRAALQALKRKKRFEKQLTQ-IDGTLSTIEFQREALENSHT 101
Query: 452 EIQVLDGLKTGNVALKKVHDILNIDEIEKIMEESREGID 568
+VL + A+K VH+ +++++I+ +M+E E D
Sbjct: 102 NTEVLRNMGFAAKAMKSVHENMDLNKIDDLMQEITEQQD 140
>AB120734-1|BAC87888.1| 233|Homo sapiens Snf7 homologue associated
with Alix 3 protein.
Length = 233
Score = 35.5 bits (78), Expect = 0.14
Identities = 24/99 (24%), Positives = 47/99 (47%)
Frame = +2
Query: 272 IELNLEKDRKLAKKLLEEGKRDRAXXXXXXXXYQENLLHNTDTQLEKLEQLTHDLEFAQI 451
+E ++++ LAKK + KR +++ L D L +E LE +
Sbjct: 43 LENRIQREIALAKKHGTQNKRAALQALKRKKRFEKQLTQ-IDGTLSTIEFQREALENSHT 101
Query: 452 EIQVLDGLKTGNVALKKVHDILNIDEIEKIMEESREGID 568
+VL + A+K VH+ +++++I+ +M+E E D
Sbjct: 102 NTEVLRNMGFAAKAMKSVHENMDLNKIDDLMQEITEQQD 140
>U55054-1|AAC50563.1| 1085|Homo sapiens K-Cl cotransporter protein.
Length = 1085
Score = 31.1 bits (67), Expect = 3.0
Identities = 17/73 (23%), Positives = 39/73 (53%)
Frame = -3
Query: 425 LAVLISPAAYLYYVEDSPDISSSSIKVLPCHAYLLLVIS*LIFCLFLGLIQFFSDIVSAY 246
L I+P A ++Y + D S++++ + + + L L+ +F+G +++ + S +
Sbjct: 224 LLTYIAPPAAIFYPSGAHDTSNATLNNMRVYGTIFLTFMTLV--VFVG-VKYVNKFASLF 280
Query: 245 LAVVLVEVLPYLA 207
LA V++ +L A
Sbjct: 281 LACVIISILSIYA 293
>BC021193-1|AAH21193.1| 1085|Homo sapiens solute carrier family 12
(potassium/chloride transporters), member 4 protein.
Length = 1085
Score = 31.1 bits (67), Expect = 3.0
Identities = 17/73 (23%), Positives = 39/73 (53%)
Frame = -3
Query: 425 LAVLISPAAYLYYVEDSPDISSSSIKVLPCHAYLLLVIS*LIFCLFLGLIQFFSDIVSAY 246
L I+P A ++Y + D S++++ + + + L L+ +F+G +++ + S +
Sbjct: 224 LLTYIAPPAAIFYPSGAHDTSNATLNNMRVYGTIFLTFMTLV--VFVG-VKYVNKFASLF 280
Query: 245 LAVVLVEVLPYLA 207
LA V++ +L A
Sbjct: 281 LACVIISILSIYA 293
>AF054506-1|AAC39685.1| 1068|Homo sapiens erythroid K:Cl
cotransporter splicing isoform 2 protein.
Length = 1068
Score = 31.1 bits (67), Expect = 3.0
Identities = 17/73 (23%), Positives = 39/73 (53%)
Frame = -3
Query: 425 LAVLISPAAYLYYVEDSPDISSSSIKVLPCHAYLLLVIS*LIFCLFLGLIQFFSDIVSAY 246
L I+P A ++Y + D S++++ + + + L L+ +F+G +++ + S +
Sbjct: 224 LLTYIAPPAAIFYPSGAHDTSNATLNNMRVYGTIFLTFMTLV--VFVG-VKYVNKFASLF 280
Query: 245 LAVVLVEVLPYLA 207
LA V++ +L A
Sbjct: 281 LACVIISILSIYA 293
>AF054505-1|AAC39684.1| 1011|Homo sapiens erythroid K:Cl
cotransporter splicing isoform 1 protein.
Length = 1011
Score = 31.1 bits (67), Expect = 3.0
Identities = 17/73 (23%), Positives = 39/73 (53%)
Frame = -3
Query: 425 LAVLISPAAYLYYVEDSPDISSSSIKVLPCHAYLLLVIS*LIFCLFLGLIQFFSDIVSAY 246
L I+P A ++Y + D S++++ + + + L L+ +F+G +++ + S +
Sbjct: 224 LLTYIAPPAAIFYPSGAHDTSNATLNNMRVYGTIFLTFMTLV--VFVG-VKYVNKFASLF 280
Query: 245 LAVVLVEVLPYLA 207
LA V++ +L A
Sbjct: 281 LACVIISILSIYA 293
>AF047338-1|AAC32815.1| 1085|Homo sapiens erythroid K:Cl
cotransporter protein.
Length = 1085
Score = 31.1 bits (67), Expect = 3.0
Identities = 17/73 (23%), Positives = 39/73 (53%)
Frame = -3
Query: 425 LAVLISPAAYLYYVEDSPDISSSSIKVLPCHAYLLLVIS*LIFCLFLGLIQFFSDIVSAY 246
L I+P A ++Y + D S++++ + + + L L+ +F+G +++ + S +
Sbjct: 224 LLTYIAPPAAIFYPSGAHDTSNATLNNMRVYGTIFLTFMTLV--VFVG-VKYVNKFASLF 280
Query: 245 LAVVLVEVLPYLA 207
LA V++ +L A
Sbjct: 281 LACVIISILSIYA 293
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,297,598
Number of Sequences: 237096
Number of extensions: 1010096
Number of successful extensions: 2110
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2103
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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