Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28j09
(589 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 192 2e-49
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 192 2e-49
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 192 2e-49
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 192 2e-49
Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 176 8e-45
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 176 8e-45
Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical pr... 70 1e-12
AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein. 70 1e-12
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 33 0.11
AC006689-3|AAO21400.1| 310|Caenorhabditis elegans Hypothetical ... 32 0.26
AC006689-2|AAF39970.2| 341|Caenorhabditis elegans Hypothetical ... 32 0.26
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 31 0.46
AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical ... 30 1.4
Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical pr... 29 1.9
U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical pr... 29 1.9
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 29 1.9
AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical ... 29 1.9
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas... 29 2.4
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ... 29 2.4
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 29 3.2
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 29 3.2
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 29 3.2
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 29 3.2
U88308-4|AAB42323.1| 299|Caenorhabditis elegans Hypothetical pr... 28 4.3
AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm rec... 28 4.3
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical pr... 28 5.7
D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein. 28 5.7
AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain (... 28 5.7
AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain (... 28 5.7
AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain (... 28 5.7
Z75955-5|CAB00119.2| 285|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z82286-5|CAB05311.1| 130|Caenorhabditis elegans Hypothetical pr... 27 9.9
U97005-9|AAK72085.1| 829|Caenorhabditis elegans Hypothetical pr... 27 9.9
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 192 bits (467), Expect = 2e-49
Identities = 96/133 (72%), Positives = 106/133 (79%), Gaps = 1/133 (0%)
Frame = +3
Query: 111 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 290
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 291 LVVAVLIAGAL-QEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIXIVGDAGVRGTAXQPR 467
LVVA+++ G + A Y L KGF HL AGL G GL AG+AI IVGDAGVRGTA QPR
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 468 LFVGMILILIFAE 506
LFVGMILILIF+E
Sbjct: 133 LFVGMILILIFSE 145
Score = 31.5 bits (68), Expect = 0.46
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +3
Query: 123 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 302
F + A LGA Y G + +P L + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 303 VLI 311
+++
Sbjct: 156 LIL 158
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 192 bits (467), Expect = 2e-49
Identities = 96/133 (72%), Positives = 106/133 (79%), Gaps = 1/133 (0%)
Frame = +3
Query: 111 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 290
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 291 LVVAVLIAGAL-QEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIXIVGDAGVRGTAXQPR 467
LVVA+++ G + A Y L KGF HL AGL G GL AG+AI IVGDAGVRGTA QPR
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 468 LFVGMILILIFAE 506
LFVGMILILIF+E
Sbjct: 133 LFVGMILILIFSE 145
Score = 31.5 bits (68), Expect = 0.46
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +3
Query: 123 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 302
F + A LGA Y G + +P L + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 303 VLI 311
+++
Sbjct: 156 LIL 158
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 192 bits (467), Expect = 2e-49
Identities = 96/133 (72%), Positives = 106/133 (79%), Gaps = 1/133 (0%)
Frame = +3
Query: 111 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 290
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 291 LVVAVLIAGAL-QEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIXIVGDAGVRGTAXQPR 467
LVVA+++ G + A Y L KGF HL AGL G GL AG+AI IVGDAGVRGTA QPR
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 468 LFVGMILILIFAE 506
LFVGMILILIF+E
Sbjct: 133 LFVGMILILIFSE 145
Score = 31.5 bits (68), Expect = 0.46
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +3
Query: 123 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 302
F + A LGA Y G + +P L + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 303 VLI 311
+++
Sbjct: 156 LIL 158
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 192 bits (467), Expect = 2e-49
Identities = 96/133 (72%), Positives = 106/133 (79%), Gaps = 1/133 (0%)
Frame = +3
Query: 111 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 290
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 291 LVVAVLIAGAL-QEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIXIVGDAGVRGTAXQPR 467
LVVA+++ G + A Y L KGF HL AGL G GL AG+AI IVGDAGVRGTA QPR
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 468 LFVGMILILIFAE 506
LFVGMILILIF+E
Sbjct: 133 LFVGMILILIFSE 145
Score = 31.5 bits (68), Expect = 0.46
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +3
Query: 123 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 302
F + A LGA Y G + +P L + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 303 VLI 311
+++
Sbjct: 156 LIL 158
>Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 176 bits (429), Expect = 8e-45
Identities = 84/134 (62%), Positives = 105/134 (78%), Gaps = 1/134 (0%)
Frame = +3
Query: 108 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 287
+YGPFFG +G SA+ F+A G+AYGTAK+GTGIA+M+V RP+L+MK+IIPVVMAGI+AIY
Sbjct: 20 MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIY 79
Query: 288 GLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIXIVGDAGVRGTAXQP 464
GLVVAV+++G ++ ANY + F GL G GL AG+AI I GDAGVR + QP
Sbjct: 80 GLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQP 139
Query: 465 RLFVGMILILIFAE 506
R+FVGMILILIFAE
Sbjct: 140 RMFVGMILILIFAE 153
Score = 34.7 bits (76), Expect = 0.049
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +3
Query: 165 LGAAYGTAKSG-TGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGA 320
LGA Y +G G+ A+S +P + + I+ ++ A ++ +YG++VA LI GA
Sbjct: 118 LGAGYAIGIAGDAGVRALS-QQPRMFVGMILILIFAEVLGLYGMIVA-LILGA 168
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 176 bits (429), Expect = 8e-45
Identities = 84/134 (62%), Positives = 105/134 (78%), Gaps = 1/134 (0%)
Frame = +3
Query: 108 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 287
+YGPFFG +G SA+ F+A G+AYGTAK+GTGIA+M+V RP+L+MK+IIPVVMAGI+AIY
Sbjct: 20 MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIY 79
Query: 288 GLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIXIVGDAGVRGTAXQP 464
GLVVAV+++G ++ ANY + F GL G GL AG+AI I GDAGVR + QP
Sbjct: 80 GLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQP 139
Query: 465 RLFVGMILILIFAE 506
R+FVGMILILIFAE
Sbjct: 140 RMFVGMILILIFAE 153
Score = 34.7 bits (76), Expect = 0.049
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +3
Query: 165 LGAAYGTAKSG-TGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGA 320
LGA Y +G G+ A+S +P + + I+ ++ A ++ +YG++VA LI GA
Sbjct: 118 LGAGYAIGIAGDAGVRALS-QQPRMFVGMILILIFAEVLGLYGMIVA-LILGA 168
>Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical
protein T01H3.1 protein.
Length = 214
Score = 69.7 bits (163), Expect = 1e-12
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Frame = +3
Query: 132 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 311
+G ++ S LGA +G +G+ I V P + K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 312 AGALQE--PANYP------------LYKGFIHLGAGLAVGFSGLAAGFAIXIVGDAGVRG 449
G L E + P L G++ G GL VG S L G A+ IVG
Sbjct: 114 VGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIA 173
Query: 450 TAXQPRLFVGMILILIFA 503
A P LFV +++I IFA
Sbjct: 174 DAANPALFVKILIIEIFA 191
Score = 31.1 bits (67), Expect = 0.61
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +3
Query: 363 HLGAGLAVGFS----GLAAGFAIXIVGDAGVRGTAXQPRLFVGMILILIFAE 506
H+ AGL +GFS L AG+ I G + + G PR+ ++ +IF E
Sbjct: 49 HMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCE 100
>AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein.
Length = 214
Score = 69.7 bits (163), Expect = 1e-12
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Frame = +3
Query: 132 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 311
+G ++ S LGA +G +G+ I V P + K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 312 AGALQE--PANYP------------LYKGFIHLGAGLAVGFSGLAAGFAIXIVGDAGVRG 449
G L E + P L G++ G GL VG S L G A+ IVG
Sbjct: 114 VGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIA 173
Query: 450 TAXQPRLFVGMILILIFA 503
A P LFV +++I IFA
Sbjct: 174 DAANPALFVKILIIEIFA 191
Score = 31.1 bits (67), Expect = 0.61
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +3
Query: 363 HLGAGLAVGFS----GLAAGFAIXIVGDAGVRGTAXQPRLFVGMILILIFAE 506
H+ AGL +GFS L AG+ I G + + G PR+ ++ +IF E
Sbjct: 49 HMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCE 100
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 33.5 bits (73), Expect = 0.11
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 245 VDHSCRHGGYYCHLRSGRGCPDCWCPPG 328
V H C +GG+ + S R P C CP G
Sbjct: 1800 VGHECLNGGFCSYANSNRSLPHCICPSG 1827
>AC006689-3|AAO21400.1| 310|Caenorhabditis elegans Hypothetical
protein T22E7.1b protein.
Length = 310
Score = 32.3 bits (70), Expect = 0.26
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 344 GVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDR 246
GVVG +G+ D H+ T G N+ HD + D+
Sbjct: 12 GVVGAYAQGSCRTDQHEMTCRGKNSLHDLKKDQ 44
>AC006689-2|AAF39970.2| 341|Caenorhabditis elegans Hypothetical
protein T22E7.1a protein.
Length = 341
Score = 32.3 bits (70), Expect = 0.26
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 344 GVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDR 246
GVVG +G+ D H+ T G N+ HD + D+
Sbjct: 12 GVVGAYAQGSCRTDQHEMTCRGKNSLHDLKKDQ 44
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 31.5 bits (68), Expect = 0.46
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Frame = +1
Query: 22 SECVQIVITVFGTCKYSHI*QTKWLKIIQS-------TDPSLELWGRRLLSSSAPWELPM 180
SE V ++ F TC + + T + +QS ++ W R +L +PW L M
Sbjct: 283 SEAVPLLGVFFHTCNFISVLATSFTVYVQSFHFRNQHVHERMDFWMRFILLEWSPWLLRM 342
Query: 181 ELPSQE 198
++P +E
Sbjct: 343 KMPDRE 348
>AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical
protein T01A4.1a protein.
Length = 1217
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -3
Query: 545 QVDGDDKSVKTQYFSENKNKNHSDE*PR---LXSSTTHACISHDAYGETGSQTRE 390
++DG++ K + K KNH+D P L ST+ + ++ D + TR+
Sbjct: 511 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKRSSSSGTTRK 565
>Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -1
Query: 445 RTPASPTMXMAKPAARPENPTAKPAPK 365
+TPA PT +AKPA +P P + PAPK
Sbjct: 47 KTPARPT--VAKPAPKP-TPKSAPAPK 70
>U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical
protein F32A5.2b protein.
Length = 859
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 517 RPNTSAKIRIRIIPTNNLGX*AVPRTPASPTMXMAKPAARPENPTAKP 374
RP T A R+R P L PR P T A P +RP T +P
Sbjct: 82 RPATKAPNRMRRPPPRKLAQ--TPRPPVVTTQRPAPPQSRPPPVTRRP 127
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
protein F32A5.2a protein.
Length = 1000
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 517 RPNTSAKIRIRIIPTNNLGX*AVPRTPASPTMXMAKPAARPENPTAKP 374
RP T A R+R P L PR P T A P +RP T +P
Sbjct: 82 RPATKAPNRMRRPPPRKLAQ--TPRPPVVTTQRPAPPQSRPPPVTRRP 127
>AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -1
Query: 445 RTPASPTMXMAKPAARPENPTAKPAPK 365
+TPA PT +AKPA +P P + PAPK
Sbjct: 47 KTPARPT--VAKPAPKP-TPKSAPAPK 70
>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
protein.
Length = 1276
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -3
Query: 545 QVDGDDKSVKTQYFSENKNKNHSDE*PR---LXSSTTHACISHDAYGE 411
++DG++ K + K KNH+D P L ST+ + ++ D + E
Sbjct: 557 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKFDE 604
>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
protein T01A4.1c protein.
Length = 1276
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -3
Query: 545 QVDGDDKSVKTQYFSENKNKNHSDE*PR---LXSSTTHACISHDAYGE 411
++DG++ K + K KNH+D P L ST+ + ++ D + E
Sbjct: 557 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKFDE 604
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 3.2
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 275 YCHLRSGRGCPDCWCPPGASQ 337
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 257 CRHGGYYCHLRSGRGCPDCWCPPGASQ 337
C HG Y ++ SG GC +C C P S+
Sbjct: 915 CAHGFY--NITSGLGCQECNCDPLGSE 939
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 3.2
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 275 YCHLRSGRGCPDCWCPPGASQ 337
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 28.7 bits (61), Expect = 3.2
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 275 YCHLRSGRGCPDCWCPPGASQ 337
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>U88308-4|AAB42323.1| 299|Caenorhabditis elegans Hypothetical
protein C32E8.5 protein.
Length = 299
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3
Query: 404 SQTRESYSQTSTQVDE-PFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDRLHDQLR 228
S++R+ ++ T+ D+ P +K V E S+ DS + D R DDR D D R
Sbjct: 24 SRSRDRQTRRDTRRDDSPKIKREVKE--EQFSDNDSPRRRRDDRGGRRDDRRDNRRDDRR 81
Query: 227 PH 222
H
Sbjct: 82 DH 83
>AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm
receptor protein 82 protein.
Length = 362
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 225 RPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPANYPLY 350
RPE ++ +VMA + AIY + +++ L NY LY
Sbjct: 35 RPEYGSYKLLMMVMATLYAIYSAIEVIILPSYLVFEYNYLLY 76
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = +2
Query: 278 CHLRSGR-GCPDCWCPPGASQLPP 346
C L + R GCP C CPP PP
Sbjct: 933 CQLVNDRSGCPFCSCPPVKQASPP 956
>Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical
protein F40E10.1 protein.
Length = 605
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 257 CRHGGYYCHLRSGRGCPDCWCPPG-ASQLPPLQRVHPLGCWFG 382
C++GGY + C +C CPPG QL + + GC G
Sbjct: 331 CQNGGYI----NPNDCNNCKCPPGFGGQLCDVAGTNSNGCGAG 369
>D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein.
Length = 605
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 257 CRHGGYYCHLRSGRGCPDCWCPPG-ASQLPPLQRVHPLGCWFG 382
C++GGY + C +C CPPG QL + + GC G
Sbjct: 331 CQNGGYI----NPNDCNNCKCPPGFGGQLCDVAGTNSNGCGAG 369
>AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform c protein.
Length = 784
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/61 (26%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = -3
Query: 452 STTHACISHD-AYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGN 276
S H + D Y ET SQT + + T V E N+D D +
Sbjct: 570 SAIHTVVKSDWNYSETSSQTEKPFDPTDGPPSYEIANSFVQIAFENEQNEDHFDTEISRQ 629
Query: 275 N 273
N
Sbjct: 630 N 630
>AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform a protein.
Length = 814
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/61 (26%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = -3
Query: 452 STTHACISHD-AYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGN 276
S H + D Y ET SQT + + T V E N+D D +
Sbjct: 570 SAIHTVVKSDWNYSETSSQTEKPFDPTDGPPSYEIANSFVQIAFENEQNEDHFDTEISRQ 629
Query: 275 N 273
N
Sbjct: 630 N 630
>AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform b protein.
Length = 853
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/61 (26%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = -3
Query: 452 STTHACISHD-AYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGN 276
S H + D Y ET SQT + + T V E N+D D +
Sbjct: 609 SAIHTVVKSDWNYSETSSQTEKPFDPTDGPPSYEIANSFVQIAFENEQNEDHFDTEISRQ 668
Query: 275 N 273
N
Sbjct: 669 N 669
>Z75955-5|CAB00119.2| 285|Caenorhabditis elegans Hypothetical
protein R07B7.10 protein.
Length = 285
Score = 27.5 bits (58), Expect = 7.5
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = +3
Query: 282 IYGLVVAVLIAGALQEPANYPLYKG----FIHLGAGLAVGFSGLAAGFAIXIVGDAGVRG 449
IY +V ++ QE Y LYKG FI GA ++ F+G AG GD+ V
Sbjct: 34 IYKGIVDCMVKTMKQESV-YGLYKGMFVPFISTGALHSLLFAGYGAGLKFLNPGDSNVMA 92
Query: 450 TAXQP 464
P
Sbjct: 93 RKDLP 97
>Z82286-5|CAB05311.1| 130|Caenorhabditis elegans Hypothetical
protein W02A2.8 protein.
Length = 130
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 6/38 (15%)
Frame = +2
Query: 236 DHEVDHSCRHGGY-YCHLR-----SGRGCPDCWCPPGA 331
DH+VD + YCHLR + R CPD W GA
Sbjct: 42 DHDVDRTIYDIPLEYCHLRIPKSRTSRSCPDPWRRYGA 79
>U97005-9|AAK72085.1| 829|Caenorhabditis elegans Hypothetical
protein F19F10.9 protein.
Length = 829
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -3
Query: 365 VDEPFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDRLHDQLRPHHR 216
+ P K G L+ N+ + Q +DG DDRN + D+L HR
Sbjct: 676 LQNPNAKSHSGPSLDHLKNKTT--QRIDGQRFDPDDRNAKKADRLNSQHR 723
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,525,576
Number of Sequences: 27780
Number of extensions: 322343
Number of successful extensions: 1125
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -