Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28j07
(539 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X60221-1|CAA42782.1| 256|Homo sapiens H+-ATP synthase subunit b... 95 1e-19
BC016350-1|AAH16350.1| 256|Homo sapiens ATP synthase, H+ transp... 95 1e-19
BC005366-1|AAH05366.1| 256|Homo sapiens ATP synthase, H+ transp... 95 1e-19
AY871272-1|AAX11428.1| 256|Homo sapiens cell proliferation-indu... 95 1e-19
AL390195-7|CAC36042.1| 256|Homo sapiens ATP synthase, H+ transp... 95 1e-19
AK223018-1|BAD96738.1| 256|Homo sapiens ATP synthase, H+ transp... 95 1e-19
BC005960-1|AAH05960.1| 256|Homo sapiens ATP synthase, H+ transp... 92 1e-18
AL390195-8|CAI15628.1| 195|Homo sapiens ATP synthase, H+ transp... 57 5e-08
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 30 6.0
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 30 6.0
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 30 6.0
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 30 6.0
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 30 6.0
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 30 6.0
>X60221-1|CAA42782.1| 256|Homo sapiens H+-ATP synthase subunit b
protein.
Length = 256
Score = 95.5 bits (227), Expect = 1e-19
Identities = 62/151 (41%), Positives = 84/151 (55%), Gaps = 7/151 (4%)
Frame = +3
Query: 108 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 269
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 270 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 446
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLVLYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 447 LAAWLDKEVEATXNEWNEGRNQTVKALEDAI 539
+A + DK E + E + +++ +++AI
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAI 150
>BC016350-1|AAH16350.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 256
Score = 95.1 bits (226), Expect = 1e-19
Identities = 62/151 (41%), Positives = 84/151 (55%), Gaps = 7/151 (4%)
Frame = +3
Query: 108 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 269
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 270 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 446
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 447 LAAWLDKEVEATXNEWNEGRNQTVKALEDAI 539
+A + DK E + E + +++ +++AI
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAI 150
>BC005366-1|AAH05366.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 256
Score = 95.1 bits (226), Expect = 1e-19
Identities = 62/151 (41%), Positives = 84/151 (55%), Gaps = 7/151 (4%)
Frame = +3
Query: 108 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 269
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 270 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 446
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 447 LAAWLDKEVEATXNEWNEGRNQTVKALEDAI 539
+A + DK E + E + +++ +++AI
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAI 150
>AY871272-1|AAX11428.1| 256|Homo sapiens cell
proliferation-inducing protein 47 protein.
Length = 256
Score = 95.1 bits (226), Expect = 1e-19
Identities = 62/151 (41%), Positives = 84/151 (55%), Gaps = 7/151 (4%)
Frame = +3
Query: 108 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 269
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 270 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 446
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 447 LAAWLDKEVEATXNEWNEGRNQTVKALEDAI 539
+A + DK E + E + +++ +++AI
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAI 150
>AL390195-7|CAC36042.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 256
Score = 95.1 bits (226), Expect = 1e-19
Identities = 62/151 (41%), Positives = 84/151 (55%), Gaps = 7/151 (4%)
Frame = +3
Query: 108 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 269
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 270 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 446
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 447 LAAWLDKEVEATXNEWNEGRNQTVKALEDAI 539
+A + DK E + E + +++ +++AI
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAI 150
>AK223018-1|BAD96738.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit b
isoform 1 pr protein.
Length = 256
Score = 95.1 bits (226), Expect = 1e-19
Identities = 62/151 (41%), Positives = 84/151 (55%), Gaps = 7/151 (4%)
Frame = +3
Query: 108 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 269
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 270 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 446
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 447 LAAWLDKEVEATXNEWNEGRNQTVKALEDAI 539
+A + DK E + E + +++ +++AI
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAI 150
>BC005960-1|AAH05960.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 256
Score = 92.3 bits (219), Expect = 1e-18
Identities = 61/151 (40%), Positives = 83/151 (54%), Gaps = 7/151 (4%)
Frame = +3
Query: 108 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 269
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 270 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 446
EE+FQF + KTGVTGPY G GL Y SK IYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKGIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 447 LAAWLDKEVEATXNEWNEGRNQTVKALEDAI 539
+A + DK E + E + +++ +++AI
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAI 150
>AL390195-8|CAI15628.1| 195|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 195
Score = 56.8 bits (131), Expect = 5e-08
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +3
Query: 294 SKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPKLAAWLDKE 470
S GPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP +A + DK
Sbjct: 8 SAAATAGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPFVADFADKL 66
Query: 471 VEATXNEWNEGRNQTVKALEDAI 539
E + E + +++ +++AI
Sbjct: 67 NEQKLAQLEEAKQASIQHIQNAI 89
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 29.9 bits (64), Expect = 6.0
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -3
Query: 498 RSIRXRSLQLPCPTKQPILVRISRE-PHTP*PAVTVRSNIRAPLHRFPCCTGMLPDPHQK 322
RS R R + P P ++ VR R+ H+ P +S +P T LP+P K
Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229
Query: 321 CKDPSHQ 301
K+PS Q
Sbjct: 230 VKEPSVQ 236
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 29.9 bits (64), Expect = 6.0
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -3
Query: 498 RSIRXRSLQLPCPTKQPILVRISRE-PHTP*PAVTVRSNIRAPLHRFPCCTGMLPDPHQK 322
RS R R + P P ++ VR R+ H+ P +S +P T LP+P K
Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229
Query: 321 CKDPSHQ 301
K+PS Q
Sbjct: 230 VKEPSVQ 236
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 29.9 bits (64), Expect = 6.0
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -3
Query: 498 RSIRXRSLQLPCPTKQPILVRISRE-PHTP*PAVTVRSNIRAPLHRFPCCTGMLPDPHQK 322
RS R R + P P ++ VR R+ H+ P +S +P T LP+P K
Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229
Query: 321 CKDPSHQ 301
K+PS Q
Sbjct: 230 VKEPSVQ 236
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 29.9 bits (64), Expect = 6.0
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -3
Query: 498 RSIRXRSLQLPCPTKQPILVRISRE-PHTP*PAVTVRSNIRAPLHRFPCCTGMLPDPHQK 322
RS R R + P P ++ VR R+ H+ P +S +P T LP+P K
Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229
Query: 321 CKDPSHQ 301
K+PS Q
Sbjct: 230 VKEPSVQ 236
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 29.9 bits (64), Expect = 6.0
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -3
Query: 498 RSIRXRSLQLPCPTKQPILVRISRE-PHTP*PAVTVRSNIRAPLHRFPCCTGMLPDPHQK 322
RS R R + P P ++ VR R+ H+ P +S +P T LP+P K
Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229
Query: 321 CKDPSHQ 301
K+PS Q
Sbjct: 230 VKEPSVQ 236
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 29.9 bits (64), Expect = 6.0
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -3
Query: 498 RSIRXRSLQLPCPTKQPILVRISRE-PHTP*PAVTVRSNIRAPLHRFPCCTGMLPDPHQK 322
RS R R + P P ++ VR R+ H+ P +S +P T LP+P K
Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229
Query: 321 CKDPSHQ 301
K+PS Q
Sbjct: 230 VKEPSVQ 236
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,668,937
Number of Sequences: 237096
Number of extensions: 2116898
Number of successful extensions: 11331
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 11123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11325
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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