Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28j01
         (577 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC013284-1|AAH13284.1|  276|Homo sapiens LOC642031 protein protein.    29   8.9  
AY168921-1|AAO17581.1| 1388|Homo sapiens Est1p-like protein A pr...    29   8.9  
AY145883-1|AAN46114.1| 1419|Homo sapiens telomerase subunit EST1...    29   8.9  
AB018275-1|BAA34452.2| 1449|Homo sapiens KIAA0732 protein protein.     29   8.9  

>BC013284-1|AAH13284.1|  276|Homo sapiens LOC642031 protein protein.
          Length = 276

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -2

Query: 342 P*APPNSCGRGGESSYGSPQMPHFPLLVSH*RWKPPQ 232
           P A P  CG+ G +S G    P + LL    R++PP+
Sbjct: 39  PWASPCHCGQPGRASSGQRSRPLWSLLAQCQRYQPPR 75


>AY168921-1|AAO17581.1| 1388|Homo sapiens Est1p-like protein A
           protein.
          Length = 1388

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +2

Query: 362 KYSSGQVIDTTVEITAYHRGYWEFK-LCTDPSNNEQECFEKYLLELXDGGTKYYPKSSGR 538
           ++S  Q +D  +   A+++   +F+ L  DP+    E     LLEL D G+ ++     +
Sbjct: 601 EFSDNQNVDQILWKNAFYQVIEKFRQLVKDPNVENPEQIRNRLLELLDEGSDFFDSLLQK 660

Query: 539 YDVRYR 556
             V Y+
Sbjct: 661 LQVTYK 666


>AY145883-1|AAN46114.1| 1419|Homo sapiens telomerase subunit EST1A
           protein.
          Length = 1419

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +2

Query: 362 KYSSGQVIDTTVEITAYHRGYWEFK-LCTDPSNNEQECFEKYLLELXDGGTKYYPKSSGR 538
           ++S  Q +D  +   A+++   +F+ L  DP+    E     LLEL D G+ ++     +
Sbjct: 632 EFSDNQNVDQILWKNAFYQVIEKFRQLVKDPNVENPEQIRNRLLELLDEGSDFFDSLLQK 691

Query: 539 YDVRYR 556
             V Y+
Sbjct: 692 LQVTYK 697


>AB018275-1|BAA34452.2| 1449|Homo sapiens KIAA0732 protein protein.
          Length = 1449

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +2

Query: 362 KYSSGQVIDTTVEITAYHRGYWEFK-LCTDPSNNEQECFEKYLLELXDGGTKYYPKSSGR 538
           ++S  Q +D  +   A+++   +F+ L  DP+    E     LLEL D G+ ++     +
Sbjct: 662 EFSDNQNVDQILWKNAFYQVIEKFRQLVKDPNVENPEQIRNRLLELLDEGSDFFDSLLQK 721

Query: 539 YDVRYR 556
             V Y+
Sbjct: 722 LQVTYK 727


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,576,112
Number of Sequences: 237096
Number of extensions: 2031926
Number of successful extensions: 5123
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5123
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)