Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28i19
         (531 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   1.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   1.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   1.5  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    23   1.9  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    23   1.9  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    23   1.9  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    23   1.9  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = -1

Query: 426 VILSV*ILCWLTXXXXXXXXXXXX*ICPARRSPCFVS 316
           VI+ V ++CWL               CP+ R   F++
Sbjct: 331 VIMGVFVVCWLPFFLMYVIVPFCPDCCPSDRMVYFIT 367


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = -1

Query: 426 VILSV*ILCWLTXXXXXXXXXXXX*ICPARRSPCFVS 316
           VI+ V ++CWL               CP+ R   F++
Sbjct: 331 VIMGVFVVCWLPFFLMYVIVPFCPDCCPSDRMVYFIT 367


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = -1

Query: 426 VILSV*ILCWLTXXXXXXXXXXXX*ICPARRSPCFVS 316
           VI+ V ++CWL               CP+ R   F++
Sbjct: 331 VIMGVFVVCWLPFFLMYVIVPFCPDCCPSDRMVYFIT 367


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 280 NMKNSRESKKLWRYKTR*STRRTNSLLPKI 369
           N  + R+ ++ W+ ++R  T R  S  PKI
Sbjct: 52  NENSYRKYRETWKERSRDRTERERSREPKI 81


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 280 NMKNSRESKKLWRYKTR*STRRTNSLLPKI 369
           N  + R+ ++ W+ ++R  T R  S  PKI
Sbjct: 52  NENSYRKYRETWKERSRDRTERERSREPKI 81


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 280 NMKNSRESKKLWRYKTR*STRRTNSLLPKI 369
           N  + R+ ++ W+ ++R  T R  S  PKI
Sbjct: 52  NENSYRKYRETWKERSRDRTERERSREPKI 81


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 280 NMKNSRESKKLWRYKTR*STRRTNSLLPKI 369
           N  + R+ ++ W+ ++R  T R  S  PKI
Sbjct: 52  NENSYRKYRETWKERSRDRTERERSREPKI 81


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,560
Number of Sequences: 438
Number of extensions: 2731
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)