Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28i17
(529 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR407612-1|CAG28540.1| 286|Homo sapiens GBAS protein. 105 1e-22
BT007112-1|AAP35776.1| 286|Homo sapiens glioblastoma amplified ... 105 1e-22
BC030821-1|AAH30821.1| 286|Homo sapiens glioblastoma amplified ... 105 1e-22
BC001837-1|AAH01837.1| 286|Homo sapiens GBAS protein protein. 105 1e-22
BC000732-1|AAH00732.1| 286|Homo sapiens GBAS protein protein. 105 1e-22
AJ001259-1|CAA04633.1| 285|Homo sapiens NIPSNAP2 protein protein. 105 1e-22
AF029786-1|AAC29002.1| 286|Homo sapiens GBAS protein. 105 1e-22
BC006473-1|AAH06473.1| 284|Homo sapiens nipsnap homolog 1 (C. e... 99 1e-20
BC002371-1|AAH02371.1| 284|Homo sapiens nipsnap homolog 1 (C. e... 99 1e-20
AJ001258-1|CAA04632.1| 284|Homo sapiens NIPSNAP1 protein protein. 98 2e-20
BC005935-1|AAH05935.1| 247|Homo sapiens nipsnap homolog 3A (C. ... 38 0.022
AL359846-7|CAH73580.1| 247|Homo sapiens nipsnap homolog 3A (C. ... 38 0.022
AK024015-1|BAB14777.1| 247|Homo sapiens protein ( Homo sapiens ... 38 0.022
D86976-1|BAA13212.1| 1165|Homo sapiens KIAA0223 protein. 32 1.4
BC065223-1|AAH65223.1| 1136|Homo sapiens histocompatibility (min... 32 1.4
BC035564-1|AAH35564.1| 1131|Homo sapiens HMHA1 protein protein. 32 1.4
AF308066-1|AAN04658.1| 1136|Homo sapiens minor histocompatibilit... 32 1.4
AC004151-1|AAC03237.1| 996|Homo sapiens D1013901 protein. 32 1.4
M55210-1|AAA59492.1| 1609|Homo sapiens laminin B2 chain protein. 31 1.9
J03202-1|AAA59488.1| 1609|Homo sapiens LAMB2 protein. 31 1.9
>CR407612-1|CAG28540.1| 286|Homo sapiens GBAS protein.
Length = 286
Score = 105 bits (252), Expect = 1e-22
Identities = 51/152 (33%), Positives = 86/152 (56%), Gaps = 2/152 (1%)
Frame = +3
Query: 78 LVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPD 251
L+P+ R ++S+ + +D W L VR+++P K++HS +L+ KE +Y L HN++P+
Sbjct: 26 LLPR-LRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPE 84
Query: 252 SVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDMDQALHLFXYVGGFEKIDKAKQL 431
++ Y K ++ + IH K C LVG+W G+ DQA+HL+ Y GG+ + +
Sbjct: 85 CLEAYNKICQEVLPKIHEDK-HYPCTLVGTWNTWYGEQDQAVHLWRYEGGYPALTEVMNK 143
Query: 432 FKQDSSYQLLESERGKMVRSRHLQYLLAFSFW 527
+++ + R M+ SR Q LL FSFW
Sbjct: 144 LRENKEFLEFRKARSDMLLSRKNQLLLEFSFW 175
>BT007112-1|AAP35776.1| 286|Homo sapiens glioblastoma amplified
sequence protein.
Length = 286
Score = 105 bits (252), Expect = 1e-22
Identities = 51/152 (33%), Positives = 86/152 (56%), Gaps = 2/152 (1%)
Frame = +3
Query: 78 LVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPD 251
L+P+ R ++S+ + +D W L VR+++P K++HS +L+ KE +Y L HN++P+
Sbjct: 26 LLPR-LRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPE 84
Query: 252 SVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDMDQALHLFXYVGGFEKIDKAKQL 431
++ Y K ++ + IH K C LVG+W G+ DQA+HL+ Y GG+ + +
Sbjct: 85 CLEAYNKICQEVLPKIHEDK-HYPCTLVGTWNTWYGEQDQAVHLWRYEGGYPALTEVMNK 143
Query: 432 FKQDSSYQLLESERGKMVRSRHLQYLLAFSFW 527
+++ + R M+ SR Q LL FSFW
Sbjct: 144 LRENKEFLEFRKARSDMLLSRKNQLLLEFSFW 175
>BC030821-1|AAH30821.1| 286|Homo sapiens glioblastoma amplified
sequence protein.
Length = 286
Score = 105 bits (252), Expect = 1e-22
Identities = 51/152 (33%), Positives = 86/152 (56%), Gaps = 2/152 (1%)
Frame = +3
Query: 78 LVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPD 251
L+P+ R ++S+ + +D W L VR+++P K++HS +L+ KE +Y L HN++P+
Sbjct: 26 LLPR-LRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPE 84
Query: 252 SVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDMDQALHLFXYVGGFEKIDKAKQL 431
++ Y K ++ + IH K C LVG+W G+ DQA+HL+ Y GG+ + +
Sbjct: 85 CLEAYNKICQEVLPKIHEDK-HYPCTLVGTWNTWYGEQDQAVHLWRYEGGYPALTEVMNK 143
Query: 432 FKQDSSYQLLESERGKMVRSRHLQYLLAFSFW 527
+++ + R M+ SR Q LL FSFW
Sbjct: 144 LRENKEFLEFRKARSDMLLSRKNQLLLEFSFW 175
>BC001837-1|AAH01837.1| 286|Homo sapiens GBAS protein protein.
Length = 286
Score = 105 bits (252), Expect = 1e-22
Identities = 51/152 (33%), Positives = 86/152 (56%), Gaps = 2/152 (1%)
Frame = +3
Query: 78 LVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPD 251
L+P+ R ++S+ + +D W L VR+++P K++HS +L+ KE +Y L HN++P+
Sbjct: 26 LLPR-LRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPE 84
Query: 252 SVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDMDQALHLFXYVGGFEKIDKAKQL 431
++ Y K ++ + IH K C LVG+W G+ DQA+HL+ Y GG+ + +
Sbjct: 85 CLEAYNKICQEVLPKIHEDK-HYPCTLVGTWNTWYGEQDQAVHLWRYEGGYPALTEVMNK 143
Query: 432 FKQDSSYQLLESERGKMVRSRHLQYLLAFSFW 527
+++ + R M+ SR Q LL FSFW
Sbjct: 144 LRENKEFLEFRKARSDMLLSRKNQLLLEFSFW 175
>BC000732-1|AAH00732.1| 286|Homo sapiens GBAS protein protein.
Length = 286
Score = 105 bits (252), Expect = 1e-22
Identities = 51/152 (33%), Positives = 86/152 (56%), Gaps = 2/152 (1%)
Frame = +3
Query: 78 LVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPD 251
L+P+ R ++S+ + +D W L VR+++P K++HS +L+ KE +Y L HN++P+
Sbjct: 26 LLPR-LRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPE 84
Query: 252 SVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDMDQALHLFXYVGGFEKIDKAKQL 431
++ Y K ++ + IH K C LVG+W G+ DQA+HL+ Y GG+ + +
Sbjct: 85 CLEAYNKICQEVLPKIHEDK-HYPCTLVGTWNTWYGEQDQAVHLWRYEGGYPALTEVMNK 143
Query: 432 FKQDSSYQLLESERGKMVRSRHLQYLLAFSFW 527
+++ + R M+ SR Q LL FSFW
Sbjct: 144 LRENKEFLEFRKARSDMLLSRKNQLLLEFSFW 175
>AJ001259-1|CAA04633.1| 285|Homo sapiens NIPSNAP2 protein protein.
Length = 285
Score = 105 bits (252), Expect = 1e-22
Identities = 51/152 (33%), Positives = 86/152 (56%), Gaps = 2/152 (1%)
Frame = +3
Query: 78 LVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPD 251
L+P+ R ++S+ + +D W L VR+++P K++HS +L+ KE +Y L HN++P+
Sbjct: 25 LLPR-LRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPE 83
Query: 252 SVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDMDQALHLFXYVGGFEKIDKAKQL 431
++ Y K ++ + IH K C LVG+W G+ DQA+HL+ Y GG+ + +
Sbjct: 84 CLEAYNKICQEVLPKIHEDK-HYPCTLVGTWNTWYGEQDQAVHLWRYEGGYPALTEVMNK 142
Query: 432 FKQDSSYQLLESERGKMVRSRHLQYLLAFSFW 527
+++ + R M+ SR Q LL FSFW
Sbjct: 143 LRENKEFLEFRKARSDMLLSRKNQLLLEFSFW 174
>AF029786-1|AAC29002.1| 286|Homo sapiens GBAS protein.
Length = 286
Score = 105 bits (252), Expect = 1e-22
Identities = 51/152 (33%), Positives = 86/152 (56%), Gaps = 2/152 (1%)
Frame = +3
Query: 78 LVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPD 251
L+P+ R ++S+ + +D W L VR+++P K++HS +L+ KE +Y L HN++P+
Sbjct: 26 LLPR-LRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPE 84
Query: 252 SVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGDMDQALHLFXYVGGFEKIDKAKQL 431
++ Y K ++ + IH K C LVG+W G+ DQA+HL+ Y GG+ + +
Sbjct: 85 CLEAYNKICQEVLPKIHEDK-HYPCTLVGTWNTWYGEQDQAVHLWRYEGGYPALTEVMNK 143
Query: 432 FKQDSSYQLLESERGKMVRSRHLQYLLAFSFW 527
+++ + R M+ SR Q LL FSFW
Sbjct: 144 LRENKEFLEFRKARSDMLLSRKNQLLLEFSFW 175
>BC006473-1|AAH06473.1| 284|Homo sapiens nipsnap homolog 1 (C.
elegans) protein.
Length = 284
Score = 98.7 bits (235), Expect = 1e-20
Identities = 46/137 (33%), Positives = 75/137 (54%), Gaps = 2/137 (1%)
Frame = +3
Query: 123 NTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPDSVDNYLKNYKQHVDL 296
+ + WF L V +++P K++HS +LS KE +Y + HN++P+ +D Y + +
Sbjct: 38 DNEGSWFRSLFVHKVDPRKDAHSTLLSKKETSNLYKIQFHNVKPEYLDAYNSLTEAVLPK 97
Query: 297 IHSHKAELGCELVGSWTVSVGDMDQALHLFXYVGGFEKIDKAKQLFKQDSSYQLLESERG 476
+H + + C LVG+W G+ DQA+HL+ + GG+ + K + Y ER
Sbjct: 98 LHLDE-DYPCSLVGNWNTWYGEQDQAVHLWRFSGGYPALMDCMNKLKNNKEYLEFRRERS 156
Query: 477 KMVRSRHLQYLLAFSFW 527
+M+ SR Q LL FSFW
Sbjct: 157 QMLLSRRNQLLLEFSFW 173
>BC002371-1|AAH02371.1| 284|Homo sapiens nipsnap homolog 1 (C.
elegans) protein.
Length = 284
Score = 98.7 bits (235), Expect = 1e-20
Identities = 46/137 (33%), Positives = 75/137 (54%), Gaps = 2/137 (1%)
Frame = +3
Query: 123 NTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPDSVDNYLKNYKQHVDL 296
+ + WF L V +++P K++HS +LS KE +Y + HN++P+ +D Y + +
Sbjct: 38 DNEGSWFRSLFVHKVDPRKDAHSTLLSKKETSNLYKIQFHNVKPEYLDAYNSLTEAVLPK 97
Query: 297 IHSHKAELGCELVGSWTVSVGDMDQALHLFXYVGGFEKIDKAKQLFKQDSSYQLLESERG 476
+H + + C LVG+W G+ DQA+HL+ + GG+ + K + Y ER
Sbjct: 98 LHLDE-DYPCSLVGNWNTWYGEQDQAVHLWRFSGGYPALMDCMNKLKNNKEYLEFRRERS 156
Query: 477 KMVRSRHLQYLLAFSFW 527
+M+ SR Q LL FSFW
Sbjct: 157 QMLLSRRNQLLLEFSFW 173
>AJ001258-1|CAA04632.1| 284|Homo sapiens NIPSNAP1 protein protein.
Length = 284
Score = 97.9 bits (233), Expect = 2e-20
Identities = 46/137 (33%), Positives = 75/137 (54%), Gaps = 2/137 (1%)
Frame = +3
Query: 123 NTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPDSVDNYLKNYKQHVDL 296
+ + WF L V +++P K++HS +LS KE +Y + HN++P+ +D Y + +
Sbjct: 38 DNEGSWFRSLFVHKVDPRKDAHSTLLSKKETSNLYKIQFHNVKPEYLDAYNSLTEAVLPK 97
Query: 297 IHSHKAELGCELVGSWTVSVGDMDQALHLFXYVGGFEKIDKAKQLFKQDSSYQLLESERG 476
+H + + C LVG+W G+ DQA+HL+ + GG+ + K + Y ER
Sbjct: 98 LHLDE-DYPCSLVGNWNTWYGEQDQAVHLWRFSGGYPALMDCMNKLKNNKEYLEFRRERT 156
Query: 477 KMVRSRHLQYLLAFSFW 527
+M+ SR Q LL FSFW
Sbjct: 157 QMLLSRRNQLLLEFSFW 173
>BC005935-1|AAH05935.1| 247|Homo sapiens nipsnap homolog 3A (C.
elegans) protein.
Length = 247
Score = 37.9 bits (84), Expect = 0.022
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 213 VIYALHTHNIRPDSVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGD-MDQALHLFX 389
+ Y ++ ++P ++ +L+N++++ L +H ELVG W+V G M+ H++
Sbjct: 35 IFYEFRSYYLKPSKMNEFLENFEKNAHLRTAHS-----ELVGYWSVEFGGRMNTVFHIWK 89
Query: 390 YVGGFEKIDKAKQLFKQDSSYQ 455
Y + + K L K D +Q
Sbjct: 90 YDNFAHRTEVRKALAK-DKEWQ 110
>AL359846-7|CAH73580.1| 247|Homo sapiens nipsnap homolog 3A (C.
elegans) protein.
Length = 247
Score = 37.9 bits (84), Expect = 0.022
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 213 VIYALHTHNIRPDSVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGD-MDQALHLFX 389
+ Y ++ ++P ++ +L+N++++ L +H ELVG W+V G M+ H++
Sbjct: 35 IFYEFRSYYLKPSKMNEFLENFEKNAHLRTAHS-----ELVGYWSVEFGGRMNTVFHIWK 89
Query: 390 YVGGFEKIDKAKQLFKQDSSYQ 455
Y + + K L K D +Q
Sbjct: 90 YDNFAHRTEVRKALAK-DKEWQ 110
>AK024015-1|BAB14777.1| 247|Homo sapiens protein ( Homo sapiens
cDNA FLJ13953 fis, clone Y79AA1001078. ).
Length = 247
Score = 37.9 bits (84), Expect = 0.022
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 213 VIYALHTHNIRPDSVDNYLKNYKQHVDLIHSHKAELGCELVGSWTVSVGD-MDQALHLFX 389
+ Y ++ ++P ++ +L+N++++ L +H ELVG W+V G M+ H++
Sbjct: 35 IFYEFRSYYLKPSKMNEFLENFEKNAHLRTAHS-----ELVGYWSVEFGGRMNTVFHIWK 89
Query: 390 YVGGFEKIDKAKQLFKQDSSYQ 455
Y + + K L K D +Q
Sbjct: 90 YDNFAHRTEVQKALAK-DKEWQ 110
>D86976-1|BAA13212.1| 1165|Homo sapiens KIAA0223 protein.
Length = 1165
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 306 HKAELGCELVGSWTVSVGDMDQALHLFXYVGGFEKIDKAKQLFKQDSSYQLLESERG 476
H+A G ++ SW +S+ D D L G F+K ++ S+ +L++ + G
Sbjct: 637 HRAGRGHQVHKSWPLSISDSDSGLDPGPGAGDFKKFERTSSSGTMSSTEELVDPDGG 693
>BC065223-1|AAH65223.1| 1136|Homo sapiens histocompatibility (minor)
HA-1 protein.
Length = 1136
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 306 HKAELGCELVGSWTVSVGDMDQALHLFXYVGGFEKIDKAKQLFKQDSSYQLLESERG 476
H+A G ++ SW +S+ D D L G F+K ++ S+ +L++ + G
Sbjct: 608 HRAGRGHQVHKSWPLSISDSDSGLDPGPGAGDFKKFERTSSSGTMSSTEELVDPDGG 664
>BC035564-1|AAH35564.1| 1131|Homo sapiens HMHA1 protein protein.
Length = 1131
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 306 HKAELGCELVGSWTVSVGDMDQALHLFXYVGGFEKIDKAKQLFKQDSSYQLLESERG 476
H+A G ++ SW +S+ D D L G F+K ++ S+ +L++ + G
Sbjct: 603 HRAGRGHQVHKSWPLSISDSDSGLDPGPGAGDFKKFERTSSSGTMSSTEELVDPDGG 659
>AF308066-1|AAN04658.1| 1136|Homo sapiens minor histocompatibility
antigen HA-1 protein.
Length = 1136
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 306 HKAELGCELVGSWTVSVGDMDQALHLFXYVGGFEKIDKAKQLFKQDSSYQLLESERG 476
H+A G ++ SW +S+ D D L G F+K ++ S+ +L++ + G
Sbjct: 608 HRAGRGHQVHKSWPLSISDSDSGLDPGPGAGDFKKFERTSSSGTMSSTEELVDPDGG 664
>AC004151-1|AAC03237.1| 996|Homo sapiens D1013901 protein.
Length = 996
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 306 HKAELGCELVGSWTVSVGDMDQALHLFXYVGGFEKIDKAKQLFKQDSSYQLLESERG 476
H+A G ++ SW +S+ D D L G F+K ++ S+ +L++ + G
Sbjct: 468 HRAGRGHQVHKSWPLSISDSDSGLDPGPGAGDFKKFERTSSSGTMSSTEELVDPDGG 524
>M55210-1|AAA59492.1| 1609|Homo sapiens laminin B2 chain protein.
Length = 1609
Score = 31.5 bits (68), Expect = 1.9
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 409 FSNP--PTYXNKCRA*SISPTDTVHDPTSSQPSSALCECI 296
F NP P +KC+A + +P T+ +S P + CEC+
Sbjct: 869 FGNPLAPNPADKCKACNCNPYGTMKQQSSCNPVTGQCECL 908
>J03202-1|AAA59488.1| 1609|Homo sapiens LAMB2 protein.
Length = 1609
Score = 31.5 bits (68), Expect = 1.9
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 409 FSNP--PTYXNKCRA*SISPTDTVHDPTSSQPSSALCECI 296
F NP P +KC+A + +P T+ +S P + CEC+
Sbjct: 869 FGNPLAPNPADKCKACNCNPYGTMKQQSSCNPVTGQCECL 908
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,325,907
Number of Sequences: 237096
Number of extensions: 1553011
Number of successful extensions: 3206
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3185
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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