Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28i04
(587 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 2.2
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 2.2
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 23 2.9
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 23 2.9
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 23 2.9
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 23 2.9
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 23 2.9
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 23 2.9
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 23 2.9
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 2.9
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 2.9
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 2.9
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 2.9
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 2.9
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 2.9
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 2.9
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 2.9
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 2.9
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 3.9
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 3.9
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 22 5.1
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 23.0 bits (47), Expect = 2.2
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 211 GTARNHRAFPSFLLKRDPCP 152
G +R HR PS +++ P P
Sbjct: 322 GRSREHRIIPSHYIEQIPAP 341
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 23.0 bits (47), Expect = 2.2
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +1
Query: 217 FQFILHILAAMTAGMHMLSLVTVAAVPDHRCWIDGVDTNESIAA 348
F FI++ +T ++ V +HR +I G+D+N + A
Sbjct: 960 FAFIVNSNLRLTFSKNVQGRVGFVTPFEHRHFISGIDSNLHVYA 1003
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 2.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 211 GTARNHRAFPSFLLKRDPCP 152
G +R HR PS +++ P P
Sbjct: 74 GRSREHRIIPSHYIEQIPVP 93
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 2.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 211 GTARNHRAFPSFLLKRDPCP 152
G +R HR PS +++ P P
Sbjct: 74 GRSREHRIIPSHYIEQIPVP 93
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 2.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 211 GTARNHRAFPSFLLKRDPCP 152
G +R HR PS +++ P P
Sbjct: 74 GRSREHRIIPSHYIEQIPVP 93
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 2.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 211 GTARNHRAFPSFLLKRDPCP 152
G +R HR PS +++ P P
Sbjct: 74 GRSREHRIIPSHYIEQIPVP 93
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 2.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 211 GTARNHRAFPSFLLKRDPCP 152
G +R HR PS +++ P P
Sbjct: 74 GRSREHRIIPSHYIEQIPVP 93
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 2.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 211 GTARNHRAFPSFLLKRDPCP 152
G +R HR PS +++ P P
Sbjct: 74 GRSREHRIIPSHYIEQIPVP 93
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 2.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 211 GTARNHRAFPSFLLKRDPCP 152
G +R HR PS +++ P P
Sbjct: 74 GRSREHRIIPSHYIEQIPVP 93
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 2.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 211 GTARNHRAFPSFLLKRDPCP 152
G +R HR PS +++ P P
Sbjct: 323 GRSREHRIIPSHYIEQIPVP 342
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 2.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 211 GTARNHRAFPSFLLKRDPCP 152
G +R HR PS +++ P P
Sbjct: 323 GRSREHRIIPSHYIEQIPVP 342
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 2.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 211 GTARNHRAFPSFLLKRDPCP 152
G +R HR PS +++ P P
Sbjct: 323 GRSREHRIIPSHYIEQIPVP 342
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 2.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 211 GTARNHRAFPSFLLKRDPCP 152
G +R HR PS +++ P P
Sbjct: 323 GRSREHRIIPSHYIEQIPVP 342
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 2.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 211 GTARNHRAFPSFLLKRDPCP 152
G +R HR PS +++ P P
Sbjct: 323 GRSREHRIIPSHYIEQIPVP 342
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 2.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 211 GTARNHRAFPSFLLKRDPCP 152
G +R HR PS +++ P P
Sbjct: 323 GRSREHRIIPSHYIEQIPVP 342
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.6 bits (46), Expect = 2.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 211 GTARNHRAFPSFLLKRDPCP 152
G +R HR PS +++ P P
Sbjct: 307 GRSREHRIIPSHYIEQIPVP 326
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 2.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 211 GTARNHRAFPSFLLKRDPCP 152
G +R HR PS +++ P P
Sbjct: 323 GRSREHRIIPSHYIEQIPVP 342
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.6 bits (46), Expect = 2.9
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -2
Query: 220 ENIGTARNHRAFPSFLLKRDPCP 152
E++ +HR +P+F DP P
Sbjct: 61 ESLTAQAHHRLYPAFSSSCDPVP 83
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 3.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 210 VPPEITELSHHFF*SAILVHG 148
+PP I E +F SA++VHG
Sbjct: 1 MPPIIGETLRVWFLSALVVHG 21
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 3.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 210 VPPEITELSHHFF*SAILVHG 148
+PP I E +F SA++VHG
Sbjct: 1 MPPIIGETLRVWFLSALVVHG 21
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.8 bits (44), Expect = 5.1
Identities = 11/44 (25%), Positives = 20/44 (45%)
Frame = -3
Query: 327 VDAVDPASVIRNCGHCH*RQHMHTSRHSSEDMQNKLKTLVPPEI 196
VD + + +N R HT H+S+ M ++ + L E+
Sbjct: 205 VDNKNTLIIYQNADDSFHRLSSHTLNHNSDKMSDQQENLTLKEV 248
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,927
Number of Sequences: 438
Number of extensions: 3585
Number of successful extensions: 21
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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