Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28h22
(427 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC130445-1|AAI30446.1| 843|Homo sapiens F-box protein 11 protein. 30 2.8
BC043258-1|AAH43258.2| 915|Homo sapiens FBXO11 protein protein. 30 2.8
AY827075-1|AAV87312.1| 927|Homo sapiens F-box protein 11 protein. 30 2.8
AK223592-1|BAD97312.1| 843|Homo sapiens F-box only protein 11 i... 30 2.8
AK022735-1|BAB14214.1| 561|Homo sapiens protein ( Homo sapiens ... 30 2.8
AC079807-1|AAY24083.1| 584|Homo sapiens unknown protein. 30 2.8
BC015649-1|AAH15649.1| 587|Homo sapiens BTB (POZ) domain contai... 30 3.8
AL591038-1|CAI11059.1| 587|Homo sapiens BTB (POZ) domain contai... 30 3.8
AL355574-2|CAI14117.1| 587|Homo sapiens BTB (POZ) domain contai... 30 3.8
>BC130445-1|AAI30446.1| 843|Homo sapiens F-box protein 11 protein.
Length = 843
Score = 30.3 bits (65), Expect = 2.8
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 271 IFLRENSDLYRNTMTPELSMNDRIK*HFHSHHCLVSNVKMYNVI 402
+F+ + D Y MT + +D+ H ++HHCL V +I
Sbjct: 247 VFMEGSEDAYVGYMTIRFNPDDKSAQHHNAHHCLEITVNCSPII 290
>BC043258-1|AAH43258.2| 915|Homo sapiens FBXO11 protein protein.
Length = 915
Score = 30.3 bits (65), Expect = 2.8
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 271 IFLRENSDLYRNTMTPELSMNDRIK*HFHSHHCLVSNVKMYNVI 402
+F+ + D Y MT + +D+ H ++HHCL V +I
Sbjct: 319 VFMEGSEDAYVGYMTIRFNPDDKSAQHHNAHHCLEITVNCSPII 362
>AY827075-1|AAV87312.1| 927|Homo sapiens F-box protein 11 protein.
Length = 927
Score = 30.3 bits (65), Expect = 2.8
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 271 IFLRENSDLYRNTMTPELSMNDRIK*HFHSHHCLVSNVKMYNVI 402
+F+ + D Y MT + +D+ H ++HHCL V +I
Sbjct: 331 VFMEGSEDAYVGYMTIRFNPDDKSAQHHNAHHCLEITVNCSPII 374
>AK223592-1|BAD97312.1| 843|Homo sapiens F-box only protein 11
isoform 1 variant protein.
Length = 843
Score = 30.3 bits (65), Expect = 2.8
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 271 IFLRENSDLYRNTMTPELSMNDRIK*HFHSHHCLVSNVKMYNVI 402
+F+ + D Y MT + +D+ H ++HHCL V +I
Sbjct: 247 VFMEGSEDAYVGYMTIRFNPDDKSAQHHNAHHCLEITVNCSPII 290
>AK022735-1|BAB14214.1| 561|Homo sapiens protein ( Homo sapiens
cDNA FLJ12673 fis, clone NT2RM4002344. ).
Length = 561
Score = 30.3 bits (65), Expect = 2.8
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 271 IFLRENSDLYRNTMTPELSMNDRIK*HFHSHHCLVSNVKMYNVI 402
+F+ + D Y MT + +D+ H ++HHCL V +I
Sbjct: 122 VFMEGSEDAYVGYMTIRFNPDDKSAQHHNAHHCLEITVNCSPII 165
>AC079807-1|AAY24083.1| 584|Homo sapiens unknown protein.
Length = 584
Score = 30.3 bits (65), Expect = 2.8
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 271 IFLRENSDLYRNTMTPELSMNDRIK*HFHSHHCLVSNVKMYNVI 402
+F+ + D Y MT + +D+ H ++HHCL V +I
Sbjct: 247 VFMEGSEDAYVGYMTIRFNPDDKSAQHHNAHHCLEITVNCSPII 290
>BC015649-1|AAH15649.1| 587|Homo sapiens BTB (POZ) domain
containing 14A protein.
Length = 587
Score = 29.9 bits (64), Expect = 3.8
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +2
Query: 107 LEKRTNNMYISTTGSYRIKYAIE-IGIPINSAIHVNSHIGLVP--FLV*IMYRCSEKLFS 277
+E++ MYI +GSY ++ E + + S + + + +P + I YRC KL+S
Sbjct: 279 VEEQYGQMYIKASGSYAVQEKPEPVPLESRSCVLIRRDLVALPASLISQIGYRCHPKLYS 338
Query: 278 FG 283
G
Sbjct: 339 EG 340
>AL591038-1|CAI11059.1| 587|Homo sapiens BTB (POZ) domain
containing 14A protein.
Length = 587
Score = 29.9 bits (64), Expect = 3.8
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +2
Query: 107 LEKRTNNMYISTTGSYRIKYAIE-IGIPINSAIHVNSHIGLVP--FLV*IMYRCSEKLFS 277
+E++ MYI +GSY ++ E + + S + + + +P + I YRC KL+S
Sbjct: 279 VEEQYGQMYIKASGSYAVQEKPEPVPLESRSCVLIRRDLVALPASLISQIGYRCHPKLYS 338
Query: 278 FG 283
G
Sbjct: 339 EG 340
>AL355574-2|CAI14117.1| 587|Homo sapiens BTB (POZ) domain
containing 14A protein.
Length = 587
Score = 29.9 bits (64), Expect = 3.8
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +2
Query: 107 LEKRTNNMYISTTGSYRIKYAIE-IGIPINSAIHVNSHIGLVP--FLV*IMYRCSEKLFS 277
+E++ MYI +GSY ++ E + + S + + + +P + I YRC KL+S
Sbjct: 279 VEEQYGQMYIKASGSYAVQEKPEPVPLESRSCVLIRRDLVALPASLISQIGYRCHPKLYS 338
Query: 278 FG 283
G
Sbjct: 339 EG 340
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,911,764
Number of Sequences: 237096
Number of extensions: 1091937
Number of successful extensions: 1410
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1410
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3316445452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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