Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28h22
         (427 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    22   2.5  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    21   7.6  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              21   7.6  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    21   7.6  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    21   7.6  

>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 290 EFSRRKIISHYIYT*FKLKTALDQYDCSH 204
           E  +R    H++ T  +L T    Y CSH
Sbjct: 14  ECHKRFTRDHHLKTHMRLHTGEKPYHCSH 42


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
          protein.
          Length = 116

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 98 KINEVNIDRLF*SKNLRNTIY 36
          K + VNID +  +  LRN  Y
Sbjct: 26 KYDYVNIDEILANDRLRNQYY 46


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +1

Query: 190 K*CHSCEQSYWSSAVFSLNH 249
           K C+ C +SY      +L+H
Sbjct: 89  KECYCCRESYLKERHITLHH 108


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +1

Query: 190 K*CHSCEQSYWSSAVFSLNH 249
           K C+ C +SY      +L+H
Sbjct: 89  KECYCCRESYLKERHITLHH 108


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
          protein.
          Length = 116

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 98 KINEVNIDRLF*SKNLRNTIY 36
          K + VNID +  +  LRN  Y
Sbjct: 26 KYDYVNIDEILANDRLRNQYY 46


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,357
Number of Sequences: 438
Number of extensions: 2864
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10997463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)