Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28h19
(525 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001627-1|AAH01627.1| 578|Homo sapiens 2-hydroxyacyl-CoA lyase... 194 2e-49
AJ131753-1|CAB60200.1| 578|Homo sapiens 2-hydroxyphytanoyl-CoA ... 191 1e-48
AK125241-1|BAC86096.1| 569|Homo sapiens protein ( Homo sapiens ... 171 2e-42
BC007440-1|AAH07440.1| 119|Homo sapiens HACL1 protein protein. 146 4e-35
U61263-1|AAC50934.1| 632|Homo sapiens acetolactate synthase hom... 68 2e-11
BC126913-1|AAI26914.1| 241|Homo sapiens ILVBL protein protein. 68 2e-11
BC011761-1|AAH11761.1| 632|Homo sapiens ilvB (bacterial acetola... 68 2e-11
BC011722-1|AAH11722.1| 632|Homo sapiens ilvB (bacterial acetola... 68 2e-11
AC003956-1|AAB94632.1| 632|Homo sapiens acetolactate synthase p... 68 2e-11
AB209065-1|BAD92302.1| 427|Homo sapiens ilvB (bacterial acetola... 68 2e-11
BC000109-1|AAH00109.1| 224|Homo sapiens ilvB (bacterial acetola... 62 9e-10
U66306-1|AAC31115.1| 251|Homo sapiens protein ( Human retinoid ... 29 7.6
BC047905-1|AAH47905.2| 915|Homo sapiens leucine-rich repeat-con... 29 10.0
AY358119-1|AAQ88486.1| 915|Homo sapiens gonadotropin receptor p... 29 10.0
AL356953-5|CAI15931.1| 232|Homo sapiens leucine-rich repeat-con... 29 10.0
AL356953-3|CAI15929.1| 915|Homo sapiens leucine-rich repeat-con... 29 10.0
AL356953-1|CAI15927.1| 967|Homo sapiens leucine-rich repeat-con... 29 10.0
AB049405-1|BAB39854.1| 928|Homo sapiens VTS20631 protein. 29 10.0
>BC001627-1|AAH01627.1| 578|Homo sapiens 2-hydroxyacyl-CoA lyase 1
protein.
Length = 578
Score = 194 bits (473), Expect = 2e-49
Identities = 85/135 (62%), Positives = 106/135 (78%)
Frame = +1
Query: 121 IDGNTILAESLKKQGVEYVFGIVGIPVIETAMAFQSAGLKYIGMRNEQAACYAAQATGYL 300
+ G ++A++LK Q VEY+FGIVGIPV E A+A Q G+KYIGMRNEQAACYAA A GYL
Sbjct: 14 VSGAKVIAQALKTQDVEYIFGIVGIPVTEIAIAAQQLGIKYIGMRNEQAACYAASAIGYL 73
Query: 301 TGKPGVCLVVSGPGLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSRM 480
T +PGVCLVVSGPGL+H +GGMANA +NCWPL+VI GS + E +G FQE+PQV++ R+
Sbjct: 74 TSRPGVCLVVSGPGLIHALGGMANANMNCWPLLVIGGSSERNQETMGAFQEFPQVEACRL 133
Query: 481 YCKYAXRPPSPRLIP 525
Y K++ RP S IP
Sbjct: 134 YTKFSARPSSIEAIP 148
>AJ131753-1|CAB60200.1| 578|Homo sapiens 2-hydroxyphytanoyl-CoA
lyase protein.
Length = 578
Score = 191 bits (465), Expect = 1e-48
Identities = 84/135 (62%), Positives = 105/135 (77%)
Frame = +1
Query: 121 IDGNTILAESLKKQGVEYVFGIVGIPVIETAMAFQSAGLKYIGMRNEQAACYAAQATGYL 300
+ G ++A++LK Q VEY+FGIVGIPV E A+A Q G+KYIGMRNEQAACYAA A GYL
Sbjct: 14 VSGAKVIAQALKTQDVEYIFGIVGIPVTEIAIAAQQLGIKYIGMRNEQAACYAASAIGYL 73
Query: 301 TGKPGVCLVVSGPGLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSRM 480
T +PGVCLVVSGPGL+H +GGMANA +NCWPL+VI GS + E +G FQE+PQV++ R+
Sbjct: 74 TSRPGVCLVVSGPGLIHALGGMANANMNCWPLLVIGGSSERNQETMGAFQEFPQVEACRL 133
Query: 481 YCKYAXRPPSPRLIP 525
Y K++ R S IP
Sbjct: 134 YTKFSARXSSIEAIP 148
>AK125241-1|BAC86096.1| 569|Homo sapiens protein ( Homo sapiens
cDNA FLJ43251 fis, clone HEART2006131, weakly similar
to Mus musculus 2-hydroxyphytanoyl-CoA lyase
(Hpcl-pending). ).
Length = 569
Score = 171 bits (415), Expect = 2e-42
Identities = 70/133 (52%), Positives = 101/133 (75%)
Frame = +1
Query: 127 GNTILAESLKKQGVEYVFGIVGIPVIETAMAFQSAGLKYIGMRNEQAACYAAQATGYLTG 306
G ++A++LK QGV+ +FGIVGIPV+E A A +AG+++IG RNEQ+A YAA GYL+G
Sbjct: 8 GADLIAQTLKNQGVQVIFGIVGIPVVEVAEACVAAGIRFIGFRNEQSAAYAASIYGYLSG 67
Query: 307 KPGVCLVVSGPGLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSRMYC 486
+PGVCL V GPG++H + G+ N+++NCWPL++++GSC D +G FQE QV+++R YC
Sbjct: 68 RPGVCLSVGGPGVVHALAGLLNSKINCWPLILLSGSCETDQTDMGAFQELDQVEAARQYC 127
Query: 487 KYAXRPPSPRLIP 525
KY+ RP S +P
Sbjct: 128 KYSARPASLEQLP 140
>BC007440-1|AAH07440.1| 119|Homo sapiens HACL1 protein protein.
Length = 119
Score = 146 bits (354), Expect = 4e-35
Identities = 63/90 (70%), Positives = 75/90 (83%)
Frame = +1
Query: 121 IDGNTILAESLKKQGVEYVFGIVGIPVIETAMAFQSAGLKYIGMRNEQAACYAAQATGYL 300
+ G ++A++LK Q VEY+FGIVGIPV E A+A Q G+KYIGMRNEQAACYAA A GYL
Sbjct: 14 VSGAKVIAQALKTQDVEYIFGIVGIPVTEIAIAAQQLGIKYIGMRNEQAACYAASAIGYL 73
Query: 301 TGKPGVCLVVSGPGLLHCIGGMANAQVNCW 390
T +PGVCLVVSGPGL+H +GGMANA +NCW
Sbjct: 74 TSRPGVCLVVSGPGLIHALGGMANANMNCW 103
>U61263-1|AAC50934.1| 632|Homo sapiens acetolactate synthase
homolog protein.
Length = 632
Score = 68.1 bits (159), Expect = 2e-11
Identities = 36/122 (29%), Positives = 63/122 (51%)
Frame = +1
Query: 127 GNTILAESLKKQGVEYVFGIVGIPVIETAMAFQSAGLKYIGMRNEQAACYAAQATGYLTG 306
G +A L+ GV ++F +VG + +A + G++ + R+E A +AA A L+G
Sbjct: 54 GGENVAAVLRAHGVRFIFTLVGGHISPLLVACEKLGIRVVDTRHEVTAVFAADAMARLSG 113
Query: 307 KPGVCLVVSGPGLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSRMYC 486
GV V +GPGL + + + NAQ+ P++++ G+ + G Q Q+ R C
Sbjct: 114 TVGVAAVTAGPGLTNTVTAVKNAQMAQSPILLLGGAASTLLQNRGALQAVDQLSLFRPLC 173
Query: 487 KY 492
K+
Sbjct: 174 KF 175
>BC126913-1|AAI26914.1| 241|Homo sapiens ILVBL protein protein.
Length = 241
Score = 68.1 bits (159), Expect = 2e-11
Identities = 36/122 (29%), Positives = 63/122 (51%)
Frame = +1
Query: 127 GNTILAESLKKQGVEYVFGIVGIPVIETAMAFQSAGLKYIGMRNEQAACYAAQATGYLTG 306
G +A L+ GV ++F +VG + +A + G++ + R+E A +AA A L+G
Sbjct: 18 GGENVAAVLRAHGVRFIFTLVGGHISPLLVACEKLGIRVVDTRHEVTAVFAADAMARLSG 77
Query: 307 KPGVCLVVSGPGLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSRMYC 486
GV V +GPGL + + + NAQ+ P++++ G+ + G Q Q+ R C
Sbjct: 78 TVGVAAVTAGPGLTNTVTAVKNAQMAQSPILLLGGAASTLLQNRGALQAVDQLSLFRPLC 137
Query: 487 KY 492
K+
Sbjct: 138 KF 139
>BC011761-1|AAH11761.1| 632|Homo sapiens ilvB (bacterial
acetolactate synthase)-like protein.
Length = 632
Score = 68.1 bits (159), Expect = 2e-11
Identities = 36/122 (29%), Positives = 63/122 (51%)
Frame = +1
Query: 127 GNTILAESLKKQGVEYVFGIVGIPVIETAMAFQSAGLKYIGMRNEQAACYAAQATGYLTG 306
G +A L+ GV ++F +VG + +A + G++ + R+E A +AA A L+G
Sbjct: 54 GGENVAAVLRAHGVRFIFTLVGGHISPLLVACEKLGIRVVDTRHEVTAVFAADAMARLSG 113
Query: 307 KPGVCLVVSGPGLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSRMYC 486
GV V +GPGL + + + NAQ+ P++++ G+ + G Q Q+ R C
Sbjct: 114 TVGVAAVTAGPGLTNTVTAVKNAQMAQSPILLLGGAASTLLQNRGALQAVDQLSLFRPLC 173
Query: 487 KY 492
K+
Sbjct: 174 KF 175
>BC011722-1|AAH11722.1| 632|Homo sapiens ilvB (bacterial
acetolactate synthase)-like protein.
Length = 632
Score = 68.1 bits (159), Expect = 2e-11
Identities = 36/122 (29%), Positives = 63/122 (51%)
Frame = +1
Query: 127 GNTILAESLKKQGVEYVFGIVGIPVIETAMAFQSAGLKYIGMRNEQAACYAAQATGYLTG 306
G +A L+ GV ++F +VG + +A + G++ + R+E A +AA A L+G
Sbjct: 54 GGENVAAVLRAHGVRFIFTLVGGHISPLLVACEKLGIRVVDTRHEVTAVFAADAMARLSG 113
Query: 307 KPGVCLVVSGPGLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSRMYC 486
GV V +GPGL + + + NAQ+ P++++ G+ + G Q Q+ R C
Sbjct: 114 TVGVAAVTAGPGLTNTVTAVKNAQMAQSPILLLGGAASTLLQNRGALQAVDQLSLFRPLC 173
Query: 487 KY 492
K+
Sbjct: 174 KF 175
>AC003956-1|AAB94632.1| 632|Homo sapiens acetolactate synthase
protein.
Length = 632
Score = 68.1 bits (159), Expect = 2e-11
Identities = 36/122 (29%), Positives = 63/122 (51%)
Frame = +1
Query: 127 GNTILAESLKKQGVEYVFGIVGIPVIETAMAFQSAGLKYIGMRNEQAACYAAQATGYLTG 306
G +A L+ GV ++F +VG + +A + G++ + R+E A +AA A L+G
Sbjct: 54 GGENVAAVLRAHGVRFIFTLVGGHISPLLVACEKLGIRVVDTRHEVTAVFAADAMARLSG 113
Query: 307 KPGVCLVVSGPGLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSRMYC 486
GV V +GPGL + + + NAQ+ P++++ G+ + G Q Q+ R C
Sbjct: 114 TVGVAAVTAGPGLTNTVTAVKNAQMAQSPILLLGGAASTLLQNRGALQAVDQLSLFRPLC 173
Query: 487 KY 492
K+
Sbjct: 174 KF 175
>AB209065-1|BAD92302.1| 427|Homo sapiens ilvB (bacterial
acetolactate synthase)-like isoform 1 variant protein.
Length = 427
Score = 68.1 bits (159), Expect = 2e-11
Identities = 36/122 (29%), Positives = 63/122 (51%)
Frame = +1
Query: 127 GNTILAESLKKQGVEYVFGIVGIPVIETAMAFQSAGLKYIGMRNEQAACYAAQATGYLTG 306
G +A L+ GV ++F +VG + +A + G++ + R+E A +AA A L+G
Sbjct: 19 GGENVAAVLRAHGVRFIFTLVGGHISPLLVACEKLGIRVVDTRHEVTAVFAADAMARLSG 78
Query: 307 KPGVCLVVSGPGLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSRMYC 486
GV V +GPGL + + + NAQ+ P++++ G+ + G Q Q+ R C
Sbjct: 79 TVGVAAVTAGPGLTNTVTAVKNAQMAQSPILLLGGAASTLLQNRGALQAVDQLSLFRPLC 138
Query: 487 KY 492
K+
Sbjct: 139 KF 140
>BC000109-1|AAH00109.1| 224|Homo sapiens ilvB (bacterial
acetolactate synthase)-like protein.
Length = 224
Score = 62.5 bits (145), Expect = 9e-10
Identities = 34/117 (29%), Positives = 60/117 (51%)
Frame = +1
Query: 127 GNTILAESLKKQGVEYVFGIVGIPVIETAMAFQSAGLKYIGMRNEQAACYAAQATGYLTG 306
G +A L+ GV ++F +VG + +A + G++ + R+E A +AA A L+G
Sbjct: 54 GGENVAAVLRAHGVRFIFTLVGGHISPLLVACEKLGIRVVDTRHEVTAVFAADAMARLSG 113
Query: 307 KPGVCLVVSGPGLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSR 477
GV V +GPGL + + + NAQ+ P++++ G+ + G Q Q+ R
Sbjct: 114 TVGVAAVTAGPGLTNTVTAVKNAQMAQSPILLLGGAASTLLQNRGALQAVDQLSLFR 170
>U66306-1|AAC31115.1| 251|Homo sapiens protein ( Human retinoid X
receptor alpha mRNA, 3' UTR, partial sequence. ).
Length = 251
Score = 29.5 bits (63), Expect = 7.6
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 419 LKIMKLLVASRNGLRWILVACTASMXPGR 505
L + LL+A R GLR +LV+C A GR
Sbjct: 47 LPSLSLLLALRGGLRLVLVSCRAGPGSGR 75
>BC047905-1|AAH47905.2| 915|Homo sapiens leucine-rich
repeat-containing G protein-coupled receptor 6 protein.
Length = 915
Score = 29.1 bits (62), Expect = 10.0
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 191 GYQSLKQQWLSNQLV*SILVCAMNKLPAMLRKLQAI*QVSQV 316
G SL+ WL + + I V A+N LPA+ A+ ++S +
Sbjct: 108 GLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHI 149
>AY358119-1|AAQ88486.1| 915|Homo sapiens gonadotropin receptor
protein.
Length = 915
Score = 29.1 bits (62), Expect = 10.0
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 191 GYQSLKQQWLSNQLV*SILVCAMNKLPAMLRKLQAI*QVSQV 316
G SL+ WL + + I V A+N LPA+ A+ ++S +
Sbjct: 108 GLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHI 149
>AL356953-5|CAI15931.1| 232|Homo sapiens leucine-rich
repeat-containing G protein-coupled receptor 6 protein.
Length = 232
Score = 29.1 bits (62), Expect = 10.0
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 191 GYQSLKQQWLSNQLV*SILVCAMNKLPAMLRKLQAI*QVSQV 316
G SL+ WL + + I V A+N LPA+ A+ ++S +
Sbjct: 86 GLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHI 127
>AL356953-3|CAI15929.1| 915|Homo sapiens leucine-rich
repeat-containing G protein-coupled receptor 6 protein.
Length = 915
Score = 29.1 bits (62), Expect = 10.0
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 191 GYQSLKQQWLSNQLV*SILVCAMNKLPAMLRKLQAI*QVSQV 316
G SL+ WL + + I V A+N LPA+ A+ ++S +
Sbjct: 108 GLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHI 149
>AL356953-1|CAI15927.1| 967|Homo sapiens leucine-rich
repeat-containing G protein-coupled receptor 6 protein.
Length = 967
Score = 29.1 bits (62), Expect = 10.0
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 191 GYQSLKQQWLSNQLV*SILVCAMNKLPAMLRKLQAI*QVSQV 316
G SL+ WL + + I V A+N LPA+ A+ ++S +
Sbjct: 160 GLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHI 201
>AB049405-1|BAB39854.1| 928|Homo sapiens VTS20631 protein.
Length = 928
Score = 29.1 bits (62), Expect = 10.0
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 191 GYQSLKQQWLSNQLV*SILVCAMNKLPAMLRKLQAI*QVSQV 316
G SL+ WL + + I V A+N LPA+ A+ ++S +
Sbjct: 121 GLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHI 162
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,123,356
Number of Sequences: 237096
Number of extensions: 1969908
Number of successful extensions: 3445
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3376
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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