Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28h15
(537 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 26 0.28
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 23 1.5
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 23 1.5
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 23 1.5
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 23 1.5
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 23 2.6
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 3.5
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 6.0
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 8.0
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 8.0
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 8.0
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 25.8 bits (54), Expect = 0.28
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -2
Query: 248 NWIIYNHSRCCNNSFGTYRYLIINYFGSAYSSWRLNYI 135
N I+N++ NN++ Y Y NY + +NYI
Sbjct: 87 NKTIHNNNNYNNNNYNNYNYNNNNYNNYKKLYYNINYI 124
Score = 21.4 bits (43), Expect = 6.0
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -2
Query: 344 IYNNSRCCNNSFGTHRYLIINY 279
I+NN+ NN++ + Y NY
Sbjct: 90 IHNNNNYNNNNYNNYNYNNNNY 111
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 353 DYIIYNNSRCCNNSFGTHRYLIINY 279
+Y YNN+ NN++ +Y INY
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINY 117
Score = 22.2 bits (45), Expect = 3.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 248 NWIIYNHSRCCNNSFGTYRYLIINY 174
N+ YN++ NN++ +Y INY
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINY 117
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 353 DYIIYNNSRCCNNSFGTHRYLIINY 279
+Y YNN+ NN++ +Y INY
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINY 117
Score = 22.2 bits (45), Expect = 3.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 248 NWIIYNHSRCCNNSFGTYRYLIINY 174
N+ YN++ NN++ +Y INY
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINY 117
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 353 DYIIYNNSRCCNNSFGTHRYLIINY 279
+Y YNN+ NN++ +Y INY
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINY 117
Score = 22.2 bits (45), Expect = 3.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 248 NWIIYNHSRCCNNSFGTYRYLIINY 174
N+ YN++ NN++ +Y INY
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINY 117
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 353 DYIIYNNSRCCNNSFGTHRYLIINY 279
+Y YNN+ NN++ +Y INY
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINY 117
Score = 22.2 bits (45), Expect = 3.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 248 NWIIYNHSRCCNNSFGTYRYLIINY 174
N+ YN++ NN++ +Y INY
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINY 117
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 22.6 bits (46), Expect = 2.6
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 21 KLINEEPKGTINDEVTPAVNEV 86
K+I +PKG+I D + + NEV
Sbjct: 235 KIIAVDPKGSILDPSSDSQNEV 256
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 22.2 bits (45), Expect = 3.5
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 21 KLINEEPKGTINDEVTPAVNEVSSGPSTIVAAPAVVVNDVIESPT 155
K+I E+ K N +TPAVN + G VA + D+ ++ T
Sbjct: 462 KIIEEKRKNK-NKNLTPAVNIIVKGD---VAGSVEALLDIFDTYT 502
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.0
Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = -2
Query: 248 NWIIYNHSRCCNNSFGTYR--YLIINY 174
N I+N++ NN++ Y+ Y INY
Sbjct: 87 NKTIHNNNNYNNNNYNNYKKLYYNINY 113
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.0 bits (42), Expect = 8.0
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 233 NHSRCCNNSFGTYRYLIINYFGSAYSSWRLN 141
N S N G Y+ + + GSA S RLN
Sbjct: 457 NISSTHTNDGGLYKCIAASKVGSAEHSARLN 487
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.0 bits (42), Expect = 8.0
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = -2
Query: 248 NWIIYNHSRCCNNSFGTYRYLI 183
N ++YNH+R + + YL+
Sbjct: 217 NLLLYNHARLMSQDNHSKEYLV 238
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.0 bits (42), Expect = 8.0
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 198 GSKTIVAAPAVVVNDPIESSTGASATEVIN 287
GS ++ A+PA +ESST + E N
Sbjct: 237 GSGSLPASPADSGVSDVESSTSSGGNEDAN 266
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,296
Number of Sequences: 438
Number of extensions: 2484
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15213684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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