Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28g22
         (298 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X86446-1|CAA60167.1|  900|Homo sapiens 55.11 protein protein.          43   2e-04
BT009736-1|AAP88738.1|  908|Homo sapiens proteasome (prosome, ma...    43   2e-04
BC007897-1|AAH07897.1|  908|Homo sapiens proteasome (prosome, ma...    43   2e-04
BC002997-1|AAH02997.1|  908|Homo sapiens proteasome (prosome, ma...    43   2e-04
BC002368-1|AAH02368.1|  908|Homo sapiens proteasome (prosome, ma...    43   2e-04
AB209843-1|BAD93080.1|  913|Homo sapiens proteasome 26S non-ATPa...    43   2e-04
D78151-1|BAA11226.1|  908|Homo sapiens human 26S proteasome subu...    42   5e-04

>X86446-1|CAA60167.1|  900|Homo sapiens 55.11 protein protein.
          Length = 900

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 22/42 (52%), Positives = 29/42 (69%)
 Frame = +1

Query: 172 DLSEEDKRLXEELNMLVDKLLGXEVDLYFPALXMLSNLIRTS 297
           +LSEEDK+L +EL MLV++L   +  LY PAL  L   IR+S
Sbjct: 35  ELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSS 76


>BT009736-1|AAP88738.1|  908|Homo sapiens proteasome (prosome,
           macropain) 26S subunit, non-ATPase, 2 protein.
          Length = 908

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 22/42 (52%), Positives = 29/42 (69%)
 Frame = +1

Query: 172 DLSEEDKRLXEELNMLVDKLLGXEVDLYFPALXMLSNLIRTS 297
           +LSEEDK+L +EL MLV++L   +  LY PAL  L   IR+S
Sbjct: 44  ELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSS 85


>BC007897-1|AAH07897.1|  908|Homo sapiens proteasome (prosome,
           macropain) 26S subunit, non-ATPase, 2 protein.
          Length = 908

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 22/42 (52%), Positives = 29/42 (69%)
 Frame = +1

Query: 172 DLSEEDKRLXEELNMLVDKLLGXEVDLYFPALXMLSNLIRTS 297
           +LSEEDK+L +EL MLV++L   +  LY PAL  L   IR+S
Sbjct: 44  ELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSS 85


>BC002997-1|AAH02997.1|  908|Homo sapiens proteasome (prosome,
           macropain) 26S subunit, non-ATPase, 2 protein.
          Length = 908

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 22/42 (52%), Positives = 29/42 (69%)
 Frame = +1

Query: 172 DLSEEDKRLXEELNMLVDKLLGXEVDLYFPALXMLSNLIRTS 297
           +LSEEDK+L +EL MLV++L   +  LY PAL  L   IR+S
Sbjct: 44  ELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSS 85


>BC002368-1|AAH02368.1|  908|Homo sapiens proteasome (prosome,
           macropain) 26S subunit, non-ATPase, 2 protein.
          Length = 908

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 22/42 (52%), Positives = 29/42 (69%)
 Frame = +1

Query: 172 DLSEEDKRLXEELNMLVDKLLGXEVDLYFPALXMLSNLIRTS 297
           +LSEEDK+L +EL MLV++L   +  LY PAL  L   IR+S
Sbjct: 44  ELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSS 85


>AB209843-1|BAD93080.1|  913|Homo sapiens proteasome 26S non-ATPase
           subunit 2 variant protein.
          Length = 913

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 22/42 (52%), Positives = 29/42 (69%)
 Frame = +1

Query: 172 DLSEEDKRLXEELNMLVDKLLGXEVDLYFPALXMLSNLIRTS 297
           +LSEEDK+L +EL MLV++L   +  LY PAL  L   IR+S
Sbjct: 49  ELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSS 90


>D78151-1|BAA11226.1|  908|Homo sapiens human 26S proteasome subunit
           p97 protein.
          Length = 908

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 21/42 (50%), Positives = 28/42 (66%)
 Frame = +1

Query: 172 DLSEEDKRLXEELNMLVDKLLGXEVDLYFPALXMLSNLIRTS 297
           +LSEEDK+L +EL ML ++L   +  LY PAL  L   IR+S
Sbjct: 44  ELSEEDKQLQDELEMLAERLGEKDTSLYRPALEELRRQIRSS 85


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,225,409
Number of Sequences: 237096
Number of extensions: 293428
Number of successful extensions: 453
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 76,859,062
effective HSP length: 75
effective length of database: 59,076,862
effective search space used: 1358767826
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)