Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28g21
         (391 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    25   0.23 
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   2.2  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    22   2.9  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   2.9  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   3.8  
DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    21   5.0  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    21   5.0  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    21   5.0  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    21   5.0  
AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex det...    21   5.0  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    21   5.0  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    21   5.0  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    21   5.0  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    21   5.0  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    21   5.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   5.0  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        20   8.7  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 25.4 bits (53), Expect = 0.23
 Identities = 9/12 (75%), Positives = 12/12 (100%)
 Frame = +1

Query: 262 RSTGLHIQVQVG 297
           RSTGLH+Q++VG
Sbjct: 509 RSTGLHLQIRVG 520


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 52  IDFETRGLMPPVF 90
           + F+T GL+PPV+
Sbjct: 216 LGFDTEGLLPPVW 228


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
 Frame = +3

Query: 189 YDR-RAYVSKRSGQEESYRRMGESGKEHWSSHTGTSR 296
           Y R R    K    E  YR+ GE+ KE     T   R
Sbjct: 272 YSRSREREQKSYKNEREYRKYGETSKERSRDRTERER 308


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 181 VGGTTGEHMSLNVADRKKVIEEWVKAG 261
           +GGTT  H        +K  E WV+ G
Sbjct: 150 LGGTTLHHGMAYHRGHRKDYERWVQQG 176


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -3

Query: 362 NRTNAIF*QNAANSCTSGSGAPPTCT 285
           N+T++   +N +N+ +  S  PPT T
Sbjct: 615 NQTSSASRENTSNTTSMESFKPPTLT 640


>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 228 EESYRRMGESGKEHWSSHT 284
           E  YR+ GE+ KE   + T
Sbjct: 53  EREYRKYGETSKERSRNRT 71


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 228 EESYRRMGESGKEHWSSHT 284
           E  YR+ GE+ KE   + T
Sbjct: 53  EREYRKYGETSKERSRNRT 71


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 228 EESYRRMGESGKEHWSSHT 284
           E  YR+ GE+ KE   + T
Sbjct: 53  EREYRKYGETSKERSRNRT 71


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 228 EESYRRMGESGKEHWSSHT 284
           E  YR+ GE+ KE   + T
Sbjct: 53  EREYRKYGETSKERSRNRT 71


>AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 228 EESYRRMGESGKEHWSSHT 284
           E  YR+ GE+ KE   + T
Sbjct: 286 EREYRKYGETSKERSRNRT 304


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 228 EESYRRMGESGKEHWSSHT 284
           E  YR+ GE+ KE   + T
Sbjct: 286 EREYRKYGETSKERSRNRT 304


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 228 EESYRRMGESGKEHWSSHT 284
           E  YR+ GE+ KE   + T
Sbjct: 286 EREYRKYGETSKERSRNRT 304


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 228 EESYRRMGESGKEHWSSHT 284
           E  YR+ GE+ KE   + T
Sbjct: 286 EREYRKYGETSKERSRNRT 304


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 228 EESYRRMGESGKEHWSSHT 284
           E  YR+ GE+ KE   + T
Sbjct: 286 EREYRKYGETSKERSRNRT 304


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 228 EESYRRMGESGKEHWSSHT 284
           E  YR+ GE+ KE   + T
Sbjct: 275 EREYRKYGETSKERSRNRT 293


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 294 RWCTTPRRAGIGGV 335
           +WC  PR A + GV
Sbjct: 486 QWCLPPREAPLVGV 499


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/24 (29%), Positives = 11/24 (45%)
 Frame = -2

Query: 306 WCTTDLYLYVKTSAPSRFHPFFDN 235
           W +   Y  +      R HPF+D+
Sbjct: 155 WASLQPYKKLSVEVVRREHPFWDD 178


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,665
Number of Sequences: 438
Number of extensions: 2929
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)