Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28g13
(680 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M16696-1|AAA51764.1| 189|Homo sapiens APOD protein. 60 5e-09
J02611-1|AAB59517.1| 189|Homo sapiens APOD protein. 60 5e-09
CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein. 60 5e-09
CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein. 60 5e-09
BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein. 60 5e-09
BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein. 60 5e-09
BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein. 60 5e-09
S80440-1|AAB35919.1| 98|Homo sapiens apolipoprotein D protein. 52 3e-06
X54816-1|CAA38585.1| 352|Homo sapiens bikunin protein. 34 0.41
X04494-1|CAA28182.1| 352|Homo sapiens protein ( Human mRNA for ... 34 0.41
X04225-1|CAA27803.1| 352|Homo sapiens HC polypeptide protein. 34 0.41
M88249-1|AAA59196.1| 352|Homo sapiens inter-alpha-trypsin inhib... 34 0.41
BC041593-1|AAH41593.1| 352|Homo sapiens alpha-1-microglobulin/b... 34 0.41
AY544123-1|AAT11154.1| 352|Homo sapiens growth-inhibiting prote... 34 0.41
AL137850-4|CAI15899.1| 352|Homo sapiens alpha-1-microglobulin/b... 34 0.41
>M16696-1|AAA51764.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 60.5 bits (140), Expect = 5e-09
Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 4/177 (2%)
Frame = +3
Query: 114 GKCPADVQLQQEFRLADFFGKWYQAYHYSSDEQQQNNCSVLELQTKPSGIY--LNQSRID 287
GKCP + +Q+ F + + G+WY+ + + C +G LNQ
Sbjct: 26 GKCP-NPPVQENFDVNKYLGRWYEIEKIPTTFEN-GRCIQANYSLMENGKIKVLNQELRA 83
Query: 288 RGLFHRYSIAKLEIPSNLEDAAKLNVKF--FFENAPRRLRIRRYPFSVLATNYQYYATVY 461
G ++ I P NL + AKL VKF F +AP + +LAT+Y+ YA VY
Sbjct: 84 DGTVNQ--IEGEATPVNLTEPAKLEVKFSWFMPSAP---------YWILATDYENYALVY 132
Query: 462 TCQYSPLTDKHFIYIWILSRNPILNDVSKELATKPLSQLGIDVTKIKKDDLTRCTPK 632
+C + H + WIL+RNP L + + L+ IDV K+ D C PK
Sbjct: 133 SCTCI-IQLFHVDFAWILARNPNLPPETVDSLKNILTSNNIDVKKMTVTDQVNC-PK 187
>J02611-1|AAB59517.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 60.5 bits (140), Expect = 5e-09
Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 4/177 (2%)
Frame = +3
Query: 114 GKCPADVQLQQEFRLADFFGKWYQAYHYSSDEQQQNNCSVLELQTKPSGIY--LNQSRID 287
GKCP + +Q+ F + + G+WY+ + + C +G LNQ
Sbjct: 26 GKCP-NPPVQENFDVNKYLGRWYEIEKIPTTFEN-GRCIQANYSLMENGKIKVLNQELRA 83
Query: 288 RGLFHRYSIAKLEIPSNLEDAAKLNVKF--FFENAPRRLRIRRYPFSVLATNYQYYATVY 461
G ++ I P NL + AKL VKF F +AP + +LAT+Y+ YA VY
Sbjct: 84 DGTVNQ--IEGEATPVNLTEPAKLEVKFSWFMPSAP---------YWILATDYENYALVY 132
Query: 462 TCQYSPLTDKHFIYIWILSRNPILNDVSKELATKPLSQLGIDVTKIKKDDLTRCTPK 632
+C + H + WIL+RNP L + + L+ IDV K+ D C PK
Sbjct: 133 SCTCI-IQLFHVDFAWILARNPNLPPETVDSLKNILTSNNIDVKKMTVTDQVNC-PK 187
>CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 60.5 bits (140), Expect = 5e-09
Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 4/177 (2%)
Frame = +3
Query: 114 GKCPADVQLQQEFRLADFFGKWYQAYHYSSDEQQQNNCSVLELQTKPSGIY--LNQSRID 287
GKCP + +Q+ F + + G+WY+ + + C +G LNQ
Sbjct: 26 GKCP-NPPVQENFDVNKYLGRWYEIEKIPTTFEN-GRCIQANYSLMENGKIKVLNQELRA 83
Query: 288 RGLFHRYSIAKLEIPSNLEDAAKLNVKF--FFENAPRRLRIRRYPFSVLATNYQYYATVY 461
G ++ I P NL + AKL VKF F +AP + +LAT+Y+ YA VY
Sbjct: 84 DGTVNQ--IEGEATPVNLTEPAKLEVKFSWFMPSAP---------YWILATDYENYALVY 132
Query: 462 TCQYSPLTDKHFIYIWILSRNPILNDVSKELATKPLSQLGIDVTKIKKDDLTRCTPK 632
+C + H + WIL+RNP L + + L+ IDV K+ D C PK
Sbjct: 133 SCTCI-IQLFHVDFAWILARNPNLPPETVDSLKNILTSNNIDVKKMTVTDQVNC-PK 187
>CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 60.5 bits (140), Expect = 5e-09
Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 4/177 (2%)
Frame = +3
Query: 114 GKCPADVQLQQEFRLADFFGKWYQAYHYSSDEQQQNNCSVLELQTKPSGIY--LNQSRID 287
GKCP + +Q+ F + + G+WY+ + + C +G LNQ
Sbjct: 26 GKCP-NPPVQENFDVNKYLGRWYEIEKIPTTFEN-GRCIQANYSLMENGKIKVLNQELRA 83
Query: 288 RGLFHRYSIAKLEIPSNLEDAAKLNVKF--FFENAPRRLRIRRYPFSVLATNYQYYATVY 461
G ++ I P NL + AKL VKF F +AP + +LAT+Y+ YA VY
Sbjct: 84 DGTVNQ--IEGEATPVNLTEPAKLEVKFSWFMPSAP---------YWILATDYENYALVY 132
Query: 462 TCQYSPLTDKHFIYIWILSRNPILNDVSKELATKPLSQLGIDVTKIKKDDLTRCTPK 632
+C + H + WIL+RNP L + + L+ IDV K+ D C PK
Sbjct: 133 SCTCI-IQLFHVDFAWILARNPNLPPETVDSLKNILTSNNIDVKKMTVTDQVNC-PK 187
>BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 60.5 bits (140), Expect = 5e-09
Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 4/177 (2%)
Frame = +3
Query: 114 GKCPADVQLQQEFRLADFFGKWYQAYHYSSDEQQQNNCSVLELQTKPSGIY--LNQSRID 287
GKCP + +Q+ F + + G+WY+ + + C +G LNQ
Sbjct: 26 GKCP-NPPVQENFDVNKYLGRWYEIEKIPTTFEN-GRCIQANYSLMENGKIKVLNQELRA 83
Query: 288 RGLFHRYSIAKLEIPSNLEDAAKLNVKF--FFENAPRRLRIRRYPFSVLATNYQYYATVY 461
G ++ I P NL + AKL VKF F +AP + +LAT+Y+ YA VY
Sbjct: 84 DGTVNQ--IEGEATPVNLTEPAKLEVKFSWFMPSAP---------YWILATDYENYALVY 132
Query: 462 TCQYSPLTDKHFIYIWILSRNPILNDVSKELATKPLSQLGIDVTKIKKDDLTRCTPK 632
+C + H + WIL+RNP L + + L+ IDV K+ D C PK
Sbjct: 133 SCTCI-IQLFHVDFAWILARNPNLPPETVDSLKNILTSNNIDVKKMTVTDQVNC-PK 187
>BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 60.5 bits (140), Expect = 5e-09
Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 4/177 (2%)
Frame = +3
Query: 114 GKCPADVQLQQEFRLADFFGKWYQAYHYSSDEQQQNNCSVLELQTKPSGIY--LNQSRID 287
GKCP + +Q+ F + + G+WY+ + + C +G LNQ
Sbjct: 26 GKCP-NPPVQENFDVNKYLGRWYEIEKIPTTFEN-GRCIQANYSLMENGKIKVLNQELRA 83
Query: 288 RGLFHRYSIAKLEIPSNLEDAAKLNVKF--FFENAPRRLRIRRYPFSVLATNYQYYATVY 461
G ++ I P NL + AKL VKF F +AP + +LAT+Y+ YA VY
Sbjct: 84 DGTVNQ--IEGEATPVNLTEPAKLEVKFSWFMPSAP---------YWILATDYENYALVY 132
Query: 462 TCQYSPLTDKHFIYIWILSRNPILNDVSKELATKPLSQLGIDVTKIKKDDLTRCTPK 632
+C + H + WIL+RNP L + + L+ IDV K+ D C PK
Sbjct: 133 SCTCI-IQLFHVDFAWILARNPNLPPETVDSLKNILTSNNIDVKKMTVTDQVNC-PK 187
>BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 60.5 bits (140), Expect = 5e-09
Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 4/177 (2%)
Frame = +3
Query: 114 GKCPADVQLQQEFRLADFFGKWYQAYHYSSDEQQQNNCSVLELQTKPSGIY--LNQSRID 287
GKCP + +Q+ F + + G+WY+ + + C +G LNQ
Sbjct: 26 GKCP-NPPVQENFDVNKYLGRWYEIEKIPTTFEN-GRCIQANYSLMENGKIKVLNQELRA 83
Query: 288 RGLFHRYSIAKLEIPSNLEDAAKLNVKF--FFENAPRRLRIRRYPFSVLATNYQYYATVY 461
G ++ I P NL + AKL VKF F +AP + +LAT+Y+ YA VY
Sbjct: 84 DGTVNQ--IEGEATPVNLTEPAKLEVKFSWFMPSAP---------YWILATDYENYALVY 132
Query: 462 TCQYSPLTDKHFIYIWILSRNPILNDVSKELATKPLSQLGIDVTKIKKDDLTRCTPK 632
+C + H + WIL+RNP L + + L+ IDV K+ D C PK
Sbjct: 133 SCTCI-IQLFHVDFAWILARNPNLPPETVDSLKNILTSNNIDVKKMTVTDQVNC-PK 187
>S80440-1|AAB35919.1| 98|Homo sapiens apolipoprotein D protein.
Length = 98
Score = 51.6 bits (118), Expect = 3e-06
Identities = 38/103 (36%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Frame = +3
Query: 330 PSNLEDAAKLNVKF--FFENAPRRLRIRRYPFSVLATNYQYYATVYTCQYSPLTDKHFIY 503
P NL + AKL VKF F +AP + +LAT+Y+ YA VY+C + H +
Sbjct: 5 PVNLTEPAKLEVKFSWFMPSAP---------YWILATDYENYALVYSCTCI-IQLFHVDF 54
Query: 504 IWILSRNPILNDVSKELATKPLSQLGIDVTKIKKDDLTRCTPK 632
WIL+RNP L + + L+ IDV K+ D C PK
Sbjct: 55 AWILARNPNLPPETVDSLKNILTSNNIDVKKMTVTDQVNC-PK 96
>X54816-1|CAA38585.1| 352|Homo sapiens bikunin protein.
Length = 352
Score = 34.3 bits (75), Expect = 0.41
Identities = 30/138 (21%), Positives = 57/138 (41%)
Frame = +3
Query: 63 LIFAASFCVVHAYFTLPGKCPADVQLQQEFRLADFFGKWYQAYHYSSDEQQQNNCSVLEL 242
L+ S C+ + +P P ++Q+Q+ F ++ +GKWY S+ + + +
Sbjct: 7 LLLLLSACLAVSAGPVPTP-PDNIQVQENFNISRIYGKWYNLAIGSTCPWLKKIMDRMTV 65
Query: 243 QTKPSGIYLNQSRIDRGLFHRYSIAKLEIPSNLEDAAKLNVKFFFENAPRRLRIRRYPFS 422
T G ++ I R+ E S + + KF + + + + Y
Sbjct: 66 STLVLGEGATEAEISM-TSTRWRKGVCEETSGAYEKTDTDGKFLYHKSKWNITMESY--- 121
Query: 423 VLATNYQYYATVYTCQYS 476
V+ TNY YA T ++S
Sbjct: 122 VVHTNYDEYAIFLTKKFS 139
>X04494-1|CAA28182.1| 352|Homo sapiens protein ( Human mRNA for
alpha-1-microglobulin and HI-30. ).
Length = 352
Score = 34.3 bits (75), Expect = 0.41
Identities = 30/138 (21%), Positives = 57/138 (41%)
Frame = +3
Query: 63 LIFAASFCVVHAYFTLPGKCPADVQLQQEFRLADFFGKWYQAYHYSSDEQQQNNCSVLEL 242
L+ S C+ + +P P ++Q+Q+ F ++ +GKWY S+ + + +
Sbjct: 7 LLLLLSACLAVSAGPVPTP-PDNIQVQENFNISRIYGKWYNLAIGSTCPWLKKIMDRMTV 65
Query: 243 QTKPSGIYLNQSRIDRGLFHRYSIAKLEIPSNLEDAAKLNVKFFFENAPRRLRIRRYPFS 422
T G ++ I R+ E S + + KF + + + + Y
Sbjct: 66 STLVLGEGATEAEISM-TSTRWRKGVCEETSGAYEKTDTDGKFLYHKSKWNITMESY--- 121
Query: 423 VLATNYQYYATVYTCQYS 476
V+ TNY YA T ++S
Sbjct: 122 VVHTNYDEYAIFLTKKFS 139
>X04225-1|CAA27803.1| 352|Homo sapiens HC polypeptide protein.
Length = 352
Score = 34.3 bits (75), Expect = 0.41
Identities = 30/138 (21%), Positives = 57/138 (41%)
Frame = +3
Query: 63 LIFAASFCVVHAYFTLPGKCPADVQLQQEFRLADFFGKWYQAYHYSSDEQQQNNCSVLEL 242
L+ S C+ + +P P ++Q+Q+ F ++ +GKWY S+ + + +
Sbjct: 7 LLLLLSACLAVSAGPVPTP-PDNIQVQENFNISRIYGKWYNLAIGSTCPWLKKIMDRMTV 65
Query: 243 QTKPSGIYLNQSRIDRGLFHRYSIAKLEIPSNLEDAAKLNVKFFFENAPRRLRIRRYPFS 422
T G ++ I R+ E S + + KF + + + + Y
Sbjct: 66 STLVLGEGATEAEISM-TSTRWRKGVCEETSGAYEKTDTDGKFLYHKSKWNITMESY--- 121
Query: 423 VLATNYQYYATVYTCQYS 476
V+ TNY YA T ++S
Sbjct: 122 VVHTNYDEYAIFLTKKFS 139
>M88249-1|AAA59196.1| 352|Homo sapiens inter-alpha-trypsin
inhibitor light chain protein.
Length = 352
Score = 34.3 bits (75), Expect = 0.41
Identities = 30/138 (21%), Positives = 57/138 (41%)
Frame = +3
Query: 63 LIFAASFCVVHAYFTLPGKCPADVQLQQEFRLADFFGKWYQAYHYSSDEQQQNNCSVLEL 242
L+ S C+ + +P P ++Q+Q+ F ++ +GKWY S+ + + +
Sbjct: 7 LLLLLSACLAVSAGPVPTP-PDNIQVQENFNISRIYGKWYNLAIGSTCPWLKKIMDRMTV 65
Query: 243 QTKPSGIYLNQSRIDRGLFHRYSIAKLEIPSNLEDAAKLNVKFFFENAPRRLRIRRYPFS 422
T G ++ I R+ E S + + KF + + + + Y
Sbjct: 66 STLVLGEGATEAEISM-TSTRWRKGVCEETSGAYEKTDTDGKFLYHKSKWNITMESY--- 121
Query: 423 VLATNYQYYATVYTCQYS 476
V+ TNY YA T ++S
Sbjct: 122 VVHTNYDEYAIFLTKKFS 139
>BC041593-1|AAH41593.1| 352|Homo sapiens
alpha-1-microglobulin/bikunin precursor protein.
Length = 352
Score = 34.3 bits (75), Expect = 0.41
Identities = 30/138 (21%), Positives = 57/138 (41%)
Frame = +3
Query: 63 LIFAASFCVVHAYFTLPGKCPADVQLQQEFRLADFFGKWYQAYHYSSDEQQQNNCSVLEL 242
L+ S C+ + +P P ++Q+Q+ F ++ +GKWY S+ + + +
Sbjct: 7 LLLLLSACLAVSAGPVPTP-PDNIQVQENFNISRIYGKWYNLAIGSTCPWLKKIMDRMTV 65
Query: 243 QTKPSGIYLNQSRIDRGLFHRYSIAKLEIPSNLEDAAKLNVKFFFENAPRRLRIRRYPFS 422
T G ++ I R+ E S + + KF + + + + Y
Sbjct: 66 STLVLGEGATEAEISM-TSTRWRKGVCEETSGAYEKTDTDGKFLYHKSKWNITMESY--- 121
Query: 423 VLATNYQYYATVYTCQYS 476
V+ TNY YA T ++S
Sbjct: 122 VVHTNYDEYAIFLTKKFS 139
>AY544123-1|AAT11154.1| 352|Homo sapiens growth-inhibiting protein
19 protein.
Length = 352
Score = 34.3 bits (75), Expect = 0.41
Identities = 30/138 (21%), Positives = 57/138 (41%)
Frame = +3
Query: 63 LIFAASFCVVHAYFTLPGKCPADVQLQQEFRLADFFGKWYQAYHYSSDEQQQNNCSVLEL 242
L+ S C+ + +P P ++Q+Q+ F ++ +GKWY S+ + + +
Sbjct: 7 LLLLLSACLAVSAGPVPTP-PDNIQVQENFNISRIYGKWYNLAIGSTCPWLKKIMDRMTV 65
Query: 243 QTKPSGIYLNQSRIDRGLFHRYSIAKLEIPSNLEDAAKLNVKFFFENAPRRLRIRRYPFS 422
T G ++ I R+ E S + + KF + + + + Y
Sbjct: 66 STLVLGEGATEAEISM-TSTRWRKGVCEETSGAYEKTDTDGKFLYHKSKWNITMESY--- 121
Query: 423 VLATNYQYYATVYTCQYS 476
V+ TNY YA T ++S
Sbjct: 122 VVHTNYDEYAIFLTKKFS 139
>AL137850-4|CAI15899.1| 352|Homo sapiens
alpha-1-microglobulin/bikunin precursor protein.
Length = 352
Score = 34.3 bits (75), Expect = 0.41
Identities = 30/138 (21%), Positives = 57/138 (41%)
Frame = +3
Query: 63 LIFAASFCVVHAYFTLPGKCPADVQLQQEFRLADFFGKWYQAYHYSSDEQQQNNCSVLEL 242
L+ S C+ + +P P ++Q+Q+ F ++ +GKWY S+ + + +
Sbjct: 7 LLLLLSACLAVSAGPVPTP-PDNIQVQENFNISRIYGKWYNLAIGSTCPWLKKIMDRMTV 65
Query: 243 QTKPSGIYLNQSRIDRGLFHRYSIAKLEIPSNLEDAAKLNVKFFFENAPRRLRIRRYPFS 422
T G ++ I R+ E S + + KF + + + + Y
Sbjct: 66 STLVLGEGATEAEISM-TSTRWRKGVCEETSGAYEKTDTDGKFLYHKSKWNITMESY--- 121
Query: 423 VLATNYQYYATVYTCQYS 476
V+ TNY YA T ++S
Sbjct: 122 VVHTNYDEYAIFLTKKFS 139
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,140,714
Number of Sequences: 237096
Number of extensions: 1934270
Number of successful extensions: 3604
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3588
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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