Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28g04
         (535 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC063635-1|AAH63635.1|  306|Homo sapiens PDSS1 protein protein.        74   4e-13
BC049211-1|AAH49211.1|  414|Homo sapiens PDSS1 protein protein.        74   4e-13
AL390961-9|CAI17280.1|  415|Homo sapiens trans-prenyltransferase...    74   4e-13
AK223414-1|BAD97134.1|  415|Homo sapiens trans-prenyltransferase...    74   4e-13
AB210838-1|BAE48216.1|  415|Homo sapiens subunit 1 of decaprenyl...    74   4e-13
AB209763-1|BAD93000.1|  297|Homo sapiens trans-prenyltransferase...    74   4e-13
AF118395-1|AAD28559.1|  376|Homo sapiens trans-prenyltransferase...    65   1e-10
Y16794-1|CAA76390.2|  456|Homo sapiens type I hair keratin 8 pro...    29   7.8  
BC131715-1|AAI31716.1|  456|Homo sapiens keratin 38 protein.           29   7.8  
AJ786656-1|CAH10351.1|  439|Homo sapiens hHa8 protein protein.         29   7.8  

>BC063635-1|AAH63635.1|  306|Homo sapiens PDSS1 protein protein.
          Length = 306

 Score = 73.7 bits (173), Expect = 4e-13
 Identities = 38/79 (48%), Positives = 49/79 (62%)
 Frame = +2

Query: 263 SNLQSTSTGSLPDYGTQIIDPYRLLEDDLNGIYEDIRSELERNTNQSELNTIATYYFDGQ 442
           S    T+  S    G +  DP++L   DL G+YEDIR EL  +T  SEL  ++ YYFDG+
Sbjct: 75  SRFHHTTPDSKTHSGEKYTDPFKLGWRDLKGLYEDIRKELLIST--SELKEMSEYYFDGK 132

Query: 443 GKALRPMVAILMARAVNYH 499
           GKA RP++  LMARA N H
Sbjct: 133 GKAFRPIIVALMARACNIH 151


>BC049211-1|AAH49211.1|  414|Homo sapiens PDSS1 protein protein.
          Length = 414

 Score = 73.7 bits (173), Expect = 4e-13
 Identities = 38/79 (48%), Positives = 49/79 (62%)
 Frame = +2

Query: 263 SNLQSTSTGSLPDYGTQIIDPYRLLEDDLNGIYEDIRSELERNTNQSELNTIATYYFDGQ 442
           S    T+  S    G +  DP++L   DL G+YEDIR EL  +T  SEL  ++ YYFDG+
Sbjct: 74  SRFHHTTPDSKTHSGEKYTDPFKLGWRDLKGLYEDIRKELLIST--SELKEMSEYYFDGK 131

Query: 443 GKALRPMVAILMARAVNYH 499
           GKA RP++  LMARA N H
Sbjct: 132 GKAFRPIIVALMARACNIH 150


>AL390961-9|CAI17280.1|  415|Homo sapiens trans-prenyltransferase
           (TPT) protein.
          Length = 415

 Score = 73.7 bits (173), Expect = 4e-13
 Identities = 38/79 (48%), Positives = 49/79 (62%)
 Frame = +2

Query: 263 SNLQSTSTGSLPDYGTQIIDPYRLLEDDLNGIYEDIRSELERNTNQSELNTIATYYFDGQ 442
           S    T+  S    G +  DP++L   DL G+YEDIR EL  +T  SEL  ++ YYFDG+
Sbjct: 75  SRFHHTTPDSKTHSGEKYTDPFKLGWRDLKGLYEDIRKELLIST--SELKEMSEYYFDGK 132

Query: 443 GKALRPMVAILMARAVNYH 499
           GKA RP++  LMARA N H
Sbjct: 133 GKAFRPIIVALMARACNIH 151


>AK223414-1|BAD97134.1|  415|Homo sapiens trans-prenyltransferase
           variant protein.
          Length = 415

 Score = 73.7 bits (173), Expect = 4e-13
 Identities = 38/79 (48%), Positives = 49/79 (62%)
 Frame = +2

Query: 263 SNLQSTSTGSLPDYGTQIIDPYRLLEDDLNGIYEDIRSELERNTNQSELNTIATYYFDGQ 442
           S    T+  S    G +  DP++L   DL G+YEDIR EL  +T  SEL  ++ YYFDG+
Sbjct: 75  SRFHHTTPDSKTHSGEKYTDPFKLGWRDLKGLYEDIRKELLIST--SELKEMSEYYFDGK 132

Query: 443 GKALRPMVAILMARAVNYH 499
           GKA RP++  LMARA N H
Sbjct: 133 GKAFRPIIVALMARACNIH 151


>AB210838-1|BAE48216.1|  415|Homo sapiens subunit 1 of decaprenyl
           diphosphate synthase protein.
          Length = 415

 Score = 73.7 bits (173), Expect = 4e-13
 Identities = 38/79 (48%), Positives = 49/79 (62%)
 Frame = +2

Query: 263 SNLQSTSTGSLPDYGTQIIDPYRLLEDDLNGIYEDIRSELERNTNQSELNTIATYYFDGQ 442
           S    T+  S    G +  DP++L   DL G+YEDIR EL  +T  SEL  ++ YYFDG+
Sbjct: 75  SRFHHTTPDSKTHSGEKYTDPFKLGWRDLKGLYEDIRKELLIST--SELKEMSEYYFDGK 132

Query: 443 GKALRPMVAILMARAVNYH 499
           GKA RP++  LMARA N H
Sbjct: 133 GKAFRPIIVALMARACNIH 151


>AB209763-1|BAD93000.1|  297|Homo sapiens trans-prenyltransferase
           variant protein.
          Length = 297

 Score = 73.7 bits (173), Expect = 4e-13
 Identities = 38/79 (48%), Positives = 49/79 (62%)
 Frame = +2

Query: 263 SNLQSTSTGSLPDYGTQIIDPYRLLEDDLNGIYEDIRSELERNTNQSELNTIATYYFDGQ 442
           S    T+  S    G +  DP++L   DL G+YEDIR EL  +T  SEL  ++ YYFDG+
Sbjct: 82  SRFHHTTPDSKTHSGEKYTDPFKLGWRDLKGLYEDIRKELLIST--SELKEMSEYYFDGK 139

Query: 443 GKALRPMVAILMARAVNYH 499
           GKA RP++  LMARA N H
Sbjct: 140 GKAFRPIIVALMARACNIH 158


>AF118395-1|AAD28559.1|  376|Homo sapiens trans-prenyltransferase
           protein.
          Length = 376

 Score = 65.3 bits (152), Expect = 1e-10
 Identities = 35/79 (44%), Positives = 47/79 (59%)
 Frame = +2

Query: 263 SNLQSTSTGSLPDYGTQIIDPYRLLEDDLNGIYEDIRSELERNTNQSELNTIATYYFDGQ 442
           S    T+  S    G +  DP++L   DL G+YE IR E   +T  +EL  I+ YYFD +
Sbjct: 36  SQFHHTTPYSKTHSGEKYTDPFKLGWRDLKGLYEGIRKEPLIST--TELKEISEYYFDVK 93

Query: 443 GKALRPMVAILMARAVNYH 499
           GKA RP++ +LMARA N H
Sbjct: 94  GKAFRPIIVVLMARACNIH 112


>Y16794-1|CAA76390.2|  456|Homo sapiens type I hair keratin 8
           protein.
          Length = 456

 Score = 29.5 bits (63), Expect = 7.8
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 179 TCQTVTTCGPTCGAGS 226
           +C   TTCGPTCGA +
Sbjct: 436 SCGPCTTCGPTCGAST 451


>BC131715-1|AAI31716.1|  456|Homo sapiens keratin 38 protein.
          Length = 456

 Score = 29.5 bits (63), Expect = 7.8
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 179 TCQTVTTCGPTCGAGS 226
           +C   TTCGPTCGA +
Sbjct: 436 SCGPCTTCGPTCGAST 451


>AJ786656-1|CAH10351.1|  439|Homo sapiens hHa8 protein protein.
          Length = 439

 Score = 29.5 bits (63), Expect = 7.8
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 179 TCQTVTTCGPTCGAGS 226
           +C   TTCGPTCGA +
Sbjct: 419 SCGPCTTCGPTCGAST 434


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,994,969
Number of Sequences: 237096
Number of extensions: 1651766
Number of successful extensions: 4051
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4040
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)