Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28f23
(448 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0509 + 3836284-3836547,3836927-3837157,3837253-3837423,383... 91 4e-19
03_02_0936 - 12528336-12528379,12528516-12528602,12528696-125288... 88 3e-18
05_05_0202 - 23211342-23211385,23211493-23211579,23211666-232117... 80 7e-16
03_05_0467 - 24615243-24615384,24619166-24619450,24619516-246195... 48 3e-06
07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520 38 0.005
05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475 38 0.005
08_01_0699 - 6163662-6163680,6163865-6163943,6163979-6164048,616... 36 0.011
04_04_1143 + 31202901-31203034,31203312-31203345,31203913-312039... 36 0.011
12_02_0248 + 16413295-16414394,16416511-16416762,16416839-164170... 32 0.18
11_04_0381 - 16999529-16999778,16999855-17000102 31 0.32
08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751 30 0.97
10_08_0374 - 17312430-17312513,17312794-17313029,17313081-173132... 29 1.7
04_03_1035 - 21887562-21890030 29 1.7
04_03_0141 + 11767781-11767880,11767953-11769262 29 2.3
04_01_0363 + 4754650-4755912 29 2.3
04_04_1638 + 34974369-34974764 28 3.0
06_03_0885 + 25677243-25678157,25681064-25681705 28 3.9
06_01_0587 - 4211917-4212021,4212250-4212478,4213426-4213759,421... 28 3.9
02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,608... 28 3.9
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 27 5.2
09_04_0189 + 15438538-15438591,15438671-15438891,15438982-154392... 27 5.2
02_05_0003 - 24867053-24867145,24867264-24867437,24867673-248677... 27 5.2
03_02_0283 - 7078754-7078856,7079358-7079431,7079995-7080090,708... 27 6.9
06_03_0889 + 25702777-25703439 27 9.1
>03_01_0509 +
3836284-3836547,3836927-3837157,3837253-3837423,
3838379-3838522,3838640-3838819,3838926-3839151,
3839326-3839439,3839541-3839627,3839711-3839754
Length = 486
Score = 91.1 bits (216), Expect = 4e-19
Identities = 40/87 (45%), Positives = 57/87 (65%)
Frame = +2
Query: 185 MPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDL 364
MPP + PRPY G S ++ + ++ S+ Y+KP+ + +G MQ+LYD +GKRYLD
Sbjct: 51 MPPFEHRPRPYAGWSGDEILAKRKQFLGSSVFYYYQKPLNIVEGKMQYLYDENGKRYLDC 110
Query: 365 FGGIVTVSVGHCHPKVNATLKDQLDVL 445
FGGIVTVS GHCHP + + +Q +L
Sbjct: 111 FGGIVTVSCGHCHPDIVNAVVEQTKLL 137
>03_02_0936 -
12528336-12528379,12528516-12528602,12528696-12528809,
12528895-12529120,12529200-12529523,12529603-12529773,
12529870-12530100,12530291-12530479,12531176-12531178
Length = 462
Score = 87.8 bits (208), Expect = 3e-18
Identities = 42/105 (40%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Frame = +2
Query: 125 MANRGTKLCFDIVRTYSTAKMPPTDF--VPRPYTGPSYQQVEQMKGVYMPPSITNAYKKP 298
+A RG V T + A DF VP PY GPS ++ + + ++ PS+ + Y KP
Sbjct: 5 IARRGLSRLAAAVETAAVAPPRMADFNHVPLPYDGPSAAEIARKRAEFLSPSLFHFYSKP 64
Query: 299 VLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNATLKDQ 433
+ + +G MQ+L+D G+RYLD F GI TV GHCHP V + Q
Sbjct: 65 LNIVEGKMQYLFDERGRRYLDAFAGIATVCCGHCHPDVVGAIAAQ 109
>05_05_0202 -
23211342-23211385,23211493-23211579,23211666-23211779,
23211886-23212111,23212222-23212401,23212511-23212654,
23212818-23212979,23213093-23213296,23214109-23214156,
23214601-23214846
Length = 484
Score = 80.2 bits (189), Expect = 7e-16
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Frame = +2
Query: 182 KMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLT-------QGHMQWLYDN 340
KMPP D+ P PY GP +++ + + ++ PS+ + Y +P + + ++L+D
Sbjct: 44 KMPPFDYTPPPYDGPRAEEISRKRAEFLSPSLFHFYDRPWAYRHPRFGSYRDYHKYLFDE 103
Query: 341 DGKRYLDLFGGIVTVSVGHCHPKVNATLKDQ 433
DG+RYLD FGGI TV GHCHP V + +Q
Sbjct: 104 DGRRYLDAFGGIATVCCGHCHPDVVEAMVNQ 134
>03_05_0467 -
24615243-24615384,24619166-24619450,24619516-24619596,
24619807-24619904,24620038-24620190,24620705-24620760,
24620844-24621003,24621416-24621646,24621795-24621903,
24622642-24622799
Length = 490
Score = 48.4 bits (110), Expect = 3e-06
Identities = 22/68 (32%), Positives = 36/68 (52%)
Frame = +2
Query: 242 EQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAT 421
E++ + S N + PV+ ++G + D +G +Y+D V+ GHCHPKV
Sbjct: 40 EELMRMERERSAHNYHPIPVVFSKGEGSHILDPEGNKYIDFLSAYSAVNQGHCHPKVLRA 99
Query: 422 LKDQLDVL 445
LK+Q + L
Sbjct: 100 LKEQAERL 107
>07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520
Length = 448
Score = 37.5 bits (83), Expect = 0.005
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 275 ITNAYKKP-VLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNATLKDQLDVL 445
I Y + V+L G LYD DG+ YLD+ GI ++GH P A + Q L
Sbjct: 78 IVGTYNRSRVVLVAGRGCKLYDADGREYLDMAAGIAVNALGHADPDWVAAVSAQAATL 135
>05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475
Length = 465
Score = 37.5 bits (83), Expect = 0.005
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 275 ITNAYKKP-VLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNATLKDQLDVL 445
I Y + V+L G LYD DG+ YLD+ GI ++GH P A + Q L
Sbjct: 74 IVGTYNRSRVVLVAGRGCKLYDADGREYLDMAAGIAVNALGHADPDWVAAVSAQAATL 131
>08_01_0699 -
6163662-6163680,6163865-6163943,6163979-6164048,
6164151-6164266,6164656-6164734,6164831-6164921,
6165006-6165084,6165161-6165248,6165371-6165454,
6165544-6165591,6166118-6166192,6166286-6166362,
6166460-6166548,6166711-6166749,6167133-6167206,
6167496-6167588,6167820-6167917,6168100-6168172,
6168322-6168406,6168513-6168634,6169307-6169414,
6169537-6169608
Length = 585
Score = 36.3 bits (80), Expect = 0.011
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +2
Query: 296 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNATLKDQLDVL 445
P+++ + ++YD +GK+Y+D G+ + ++G P++ DQL+ L
Sbjct: 122 PLVIDRSEGSYVYDINGKKYIDALAGLWSTALGGNEPRLIKAATDQLNKL 171
>04_04_1143 +
31202901-31203034,31203312-31203345,31203913-31203985,
31204090-31204187,31204356-31204448,31205081-31205154,
31205680-31205768,31205859-31205935,31206016-31206090,
31206438-31206485,31206571-31206654,31206734-31206821,
31206896-31206974,31207072-31207162,31207724-31207802,
31208219-31208334,31208430-31208488,31210292-31210342,
31211418-31211444,31211725-31211809,31211952-31212024,
31212154-31212251,31212385-31212477,31212972-31213045,
31213258-31213296,31213410-31213498,31213583-31213707,
31213750-31213824,31214225-31214272,31214359-31214442,
31214574-31214661,31214762-31214840,31214930-31215020,
31215113-31215191,31215485-31215600,31215910-31215987
Length = 960
Score = 36.3 bits (80), Expect = 0.011
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +2
Query: 296 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNATLKDQLDVL 445
P+++ + ++YD DGK+YLD G+ ++G P++ +QL L
Sbjct: 511 PLVIERSEGSYVYDIDGKKYLDSLAGLWCTALGGSEPRLVKAATEQLHKL 560
Score = 32.7 bits (71), Expect = 0.14
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 326 WLYDNDGKRYLDLFGGIVTVSVGHCHPKVNATLKDQLDVL 445
++YD+ G +YLD G+ ++G P++ DQL+ L
Sbjct: 59 YVYDSKGNKYLDTLAGLWCTALGGSEPRLVKAATDQLNKL 98
>12_02_0248 +
16413295-16414394,16416511-16416762,16416839-16417055,
16417216-16417353,16417493-16417669,16417744-16417851,
16417925-16418392,16418493-16418570,16418673-16418756
Length = 873
Score = 32.3 bits (70), Expect = 0.18
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +2
Query: 263 MPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKV 412
MPP T KPVL +G QW ND + + GI+TV + H P +
Sbjct: 432 MPPRPTRDEDKPVLTPKGDRQW-QANDFGGNIRVPTGILTVIIKHFFPGI 480
>11_04_0381 - 16999529-16999778,16999855-17000102
Length = 165
Score = 31.5 bits (68), Expect = 0.32
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 263 MPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKV 412
MPP T KPV+ +G QW ND + + GI+TV + H P +
Sbjct: 64 MPPRPTRDEDKPVMTPKGDRQW-QANDFGGNIRVPTGILTVLIKHFFPGI 112
>08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751
Length = 478
Score = 29.9 bits (64), Expect = 0.97
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +2
Query: 293 KPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNATLKDQL 436
+P++ ++D DG Y+D G +GH VNA L + L
Sbjct: 85 QPIVFDSVKGSRMWDVDGNEYIDYVGSWGPAIIGHADDTVNAALIETL 132
>10_08_0374 -
17312430-17312513,17312794-17313029,17313081-17313261,
17313335-17313445,17313495-17313722,17313862-17313999,
17314159-17314375,17314452-17314564,17314919-17314921
Length = 436
Score = 29.1 bits (62), Expect = 1.7
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +2
Query: 263 MPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKV 412
MPP T KPVL + QW ND + + GI+TV + H P +
Sbjct: 20 MPPRPTRDEDKPVLTPKRDRQW-QANDFGGNIRVPTGILTVLIKHFFPGI 68
>04_03_1035 - 21887562-21890030
Length = 822
Score = 29.1 bits (62), Expect = 1.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 315 GTCSGYTTTTARDTWICSVESSPSP 389
GTCS Y+ A D ++CS + SP
Sbjct: 87 GTCSPYSAVVAGDGYLCSAAPTSSP 111
>04_03_0141 + 11767781-11767880,11767953-11769262
Length = 469
Score = 28.7 bits (61), Expect = 2.3
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 3/94 (3%)
Frame = +2
Query: 173 STAKMPPTDFVPRPYTGPSYQQVEQMKGVYMPP---SITNAYKKPVLLTQGHMQWLYDND 343
S+A+ PP + P + P Y Y P +I + L+ GH + L++N
Sbjct: 351 SSARPPPPGYNPNAFFHPQYAYFGMQPNEYFNPVLGAINTLSESIQRLSTGH-EALHEN- 408
Query: 344 GKRYLDLFGGIVTVSVGHCHPKVNATLKDQLDVL 445
R L G + SVG H +V TL ++ +L
Sbjct: 409 -VRGLRTTIGDLNASVGRLHTRV-GTLDSRVQML 440
>04_01_0363 + 4754650-4755912
Length = 420
Score = 28.7 bits (61), Expect = 2.3
Identities = 24/74 (32%), Positives = 28/74 (37%), Gaps = 3/74 (4%)
Frame = -1
Query: 388 GDGDDSTEQIQXXXXXXXXXXXXXXLGEKHRLLIGVRD*RRHV---NSFHLFYLLVRRSR 218
GDGDD EK ++ G R RR N+ + L V R
Sbjct: 135 GDGDDRRRGATEGGRQAADGDRDDLKNEKEKITEGERGHRRRERRPNAADMATLTVARWE 194
Query: 217 VRSGHEIRRRHFGR 176
RSG E RRR GR
Sbjct: 195 WRSGGEPRRRRGGR 208
>04_04_1638 + 34974369-34974764
Length = 131
Score = 28.3 bits (60), Expect = 3.0
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +1
Query: 160 RQNVQHGQNAADGFRAQTVHGTFVPTSRTNERSLHAAFNHERL*EAGASH 309
R HG A G R F P + R HAA +R A SH
Sbjct: 61 RHQTSHGAVAGRGLRRNRNTSMFAPPAHGEIRGAHAASKRKRKSNAADSH 110
>06_03_0885 + 25677243-25678157,25681064-25681705
Length = 518
Score = 27.9 bits (59), Expect = 3.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 263 CKLLSFVLLVGTKVPCTVWARNPSAAFWP 177
CK+L + + GT+V VWA +WP
Sbjct: 387 CKVLGYDVPRGTQVLVNVWAIGRDPRYWP 415
>06_01_0587 -
4211917-4212021,4212250-4212478,4213426-4213759,
4215116-4215186,4215374-4215493,4216353-4216771,
4216885-4217336,4217434-4217812
Length = 702
Score = 27.9 bits (59), Expect = 3.9
Identities = 23/66 (34%), Positives = 28/66 (42%)
Frame = -3
Query: 392 PRRR*RFHRTDPGISCRRCRITTACAPG*EAPASYRRS*LKAACKLLSFVLLVGTKVPCT 213
PRRR R P + CRR + G +A AS RS +AA L +VP
Sbjct: 513 PRRRRRPAPRLPALRCRRQAPAGSGLSGVQAAASPSRSVRRAAASAAPSPSLAACQVPEA 572
Query: 212 VWARNP 195
AR P
Sbjct: 573 PSARAP 578
>02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,
6087354-6088391,6089733-6089925,6090326-6090375,
6090470-6090744,6091114-6091180,6091189-6091278,
6091301-6091381,6091435-6091593
Length = 1414
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 264 M*TPFICSTCWYEGPVYGLG 205
M T ICSTC+YE V G+G
Sbjct: 1274 MSTGLICSTCYYEVEVPGVG 1293
>12_02_0522 -
19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 27.5 bits (58), Expect = 5.2
Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Frame = +1
Query: 208 QTVHGTFVPTSRTNERSLHAAFNHERL*EAGASHPGAHAVVIRQRRQEIPGSVR-WNRHR 384
Q + G +P E RL EAGA P +R RR P S W RH
Sbjct: 147 QAMVGAVMPIGGVREGGQAEPAVPSRLPEAGALVPIHRLKSLRIRRSTPPSSSSWWRRHC 206
Query: 385 LRGPLS 402
R PL+
Sbjct: 207 NRTPLT 212
>09_04_0189 +
15438538-15438591,15438671-15438891,15438982-15439214,
15439322-15439541,15440091-15440212,15441086-15441339,
15441425-15441532,15441622-15441828,15441929-15442213,
15442312-15442467
Length = 619
Score = 27.5 bits (58), Expect = 5.2
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 368 GGIVTVSVGHCHPKVNATLKDQLDVLW 448
GG+V G+ H +V A D++DV+W
Sbjct: 582 GGVVHFLEGYTHHEVGAIDVDRIDVVW 608
>02_05_0003 -
24867053-24867145,24867264-24867437,24867673-24867735,
24868108-24868198,24869579-24869673,24870471-24870668,
24871475-24871648,24872335-24872439,24872645-24872737,
24873688-24873690,24874776-24874844,24875208-24875265,
24875810-24875918,24876603-24876714,24877992-24878204,
24878214-24878546
Length = 660
Score = 27.5 bits (58), Expect = 5.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 381 VTIPPNRSRYLLPSLSYNHCMCPWV 307
V PP L ++SY HC C W+
Sbjct: 397 VKTPPVPWLVLTDAISYGHCQCQWL 421
>03_02_0283 -
7078754-7078856,7079358-7079431,7079995-7080090,
7080145-7080270,7080856-7080939,7081458-7081506,
7081630-7081688,7081908-7081925,7082141-7082620
Length = 362
Score = 27.1 bits (57), Expect = 6.9
Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Frame = +1
Query: 184 NAADGFRAQTVHGTFVPTSRTNERSLHAAF--NHERL*EAGASHPGAHAVVI 333
N A HG P + ++ + AA NH R +P AHAV +
Sbjct: 61 NPNPSHHATAAHGILYPVATSSAAAAAAAATANHRRAPAVAVGYPRAHAVAV 112
>06_03_0889 + 25702777-25703439
Length = 220
Score = 26.6 bits (56), Expect = 9.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -3
Query: 263 CKLLSFVLLVGTKVPCTVWARNPSAAFWP 177
C++L + + GT+V VWA +WP
Sbjct: 87 CRVLGYDVPRGTQVLVNVWAIGRDERYWP 115
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,227,224
Number of Sequences: 37544
Number of extensions: 290246
Number of successful extensions: 944
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 859680288
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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