Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28f22
(154 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113616-1|AAM29621.1| 112|Drosophila melanogaster RH63170p pro... 31 0.29
M81490-1|AAA28727.1| 449|Drosophila melanogaster neuropeptide r... 28 2.0
BT015303-1|AAT94531.1| 464|Drosophila melanogaster AT16733p pro... 28 2.0
AE014297-4047|AAF56655.3| 464|Drosophila melanogaster CG5811-PA... 28 2.0
Z28622-1|CAA82262.1| 1293|Drosophila melanogaster xeroderma pigm... 26 6.2
AY070566-1|AAL48037.1| 1293|Drosophila melanogaster LD47533p pro... 26 6.2
AF209743-1|AAF24766.1| 1293|Drosophila melanogaster XPC-like pro... 26 6.2
AE013599-2037|AAF58150.1| 1293|Drosophila melanogaster CG8153-PA... 26 6.2
AE013599-2036|AAM68530.1| 1294|Drosophila melanogaster CG8153-PC... 26 6.2
X75541-1|CAA53229.1| 1355|Drosophila melanogaster spalt protein ... 26 8.2
BT024230-1|ABC86292.1| 1283|Drosophila melanogaster LD24322p pro... 26 8.2
AY094956-1|AAM11309.1| 897|Drosophila melanogaster SD01232p pro... 26 8.2
AE014298-1457|AAN09261.3| 2309|Drosophila melanogaster CG17255-P... 26 8.2
AE014298-1456|AAF46591.4| 2309|Drosophila melanogaster CG17255-P... 26 8.2
AE014297-1869|AAF55074.1| 1283|Drosophila melanogaster CG7987-PB... 26 8.2
AE014297-1868|AAF55075.1| 1283|Drosophila melanogaster CG7987-PA... 26 8.2
AE014134-2066|AAF53097.3| 1365|Drosophila melanogaster CG6464-PA... 26 8.2
>AY113616-1|AAM29621.1| 112|Drosophila melanogaster RH63170p
protein.
Length = 112
Score = 30.7 bits (66), Expect = 0.29
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +1
Query: 1 DQFDHCKQTKVFKNEILRCFRCYRSCG-CR 87
++F CKQ+ +++NEIL CF CG CR
Sbjct: 3 ERFRQCKQS-IYQNEILHCFLRLDRCGLCR 31
>M81490-1|AAA28727.1| 449|Drosophila melanogaster neuropeptide
receptor protein.
Length = 449
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +1
Query: 55 CFRCYRSCGCRQPHQAHFRTRNHRFPSSRRWCC 153
C+ C ++ F HR P RRWCC
Sbjct: 362 CYNPIIYCYMNARFRSGFVQLMHRMPGLRRWCC 394
>BT015303-1|AAT94531.1| 464|Drosophila melanogaster AT16733p
protein.
Length = 464
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +1
Query: 55 CFRCYRSCGCRQPHQAHFRTRNHRFPSSRRWCC 153
C+ C ++ F HR P RRWCC
Sbjct: 377 CYNPIIYCYMNARFRSGFVQLMHRMPGLRRWCC 409
>AE014297-4047|AAF56655.3| 464|Drosophila melanogaster CG5811-PA
protein.
Length = 464
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +1
Query: 55 CFRCYRSCGCRQPHQAHFRTRNHRFPSSRRWCC 153
C+ C ++ F HR P RRWCC
Sbjct: 377 CYNPIIYCYMNARFRSGFVQLMHRMPGLRRWCC 409
>Z28622-1|CAA82262.1| 1293|Drosophila melanogaster xeroderma
pigmentosum group Ccomplementing factor protein.
Length = 1293
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 136 KREIDDFGCENGLGGVGDSHSYDSNESNEE 47
K F C G+ + DS S D+NES+ E
Sbjct: 168 KSPAPQFDCNAGITNLSDSGSEDNNESSFE 197
>AY070566-1|AAL48037.1| 1293|Drosophila melanogaster LD47533p
protein.
Length = 1293
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 136 KREIDDFGCENGLGGVGDSHSYDSNESNEE 47
K F C G+ + DS S D+NES+ E
Sbjct: 168 KSPAPQFDCNAGITNLSDSGSEDNNESSFE 197
>AF209743-1|AAF24766.1| 1293|Drosophila melanogaster XPC-like
protein isoform a protein.
Length = 1293
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 136 KREIDDFGCENGLGGVGDSHSYDSNESNEE 47
K F C G+ + DS S D+NES+ E
Sbjct: 168 KSPAPQFDCNAGITNLSDSGSEDNNESSFE 197
>AE013599-2037|AAF58150.1| 1293|Drosophila melanogaster CG8153-PA,
isoform A protein.
Length = 1293
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 136 KREIDDFGCENGLGGVGDSHSYDSNESNEE 47
K F C G+ + DS S D+NES+ E
Sbjct: 168 KSPAPQFDCNAGITNLSDSGSEDNNESSFE 197
>AE013599-2036|AAM68530.1| 1294|Drosophila melanogaster CG8153-PC,
isoform C protein.
Length = 1294
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 136 KREIDDFGCENGLGGVGDSHSYDSNESNEE 47
K F C G+ + DS S D+NES+ E
Sbjct: 169 KSPAPQFDCNAGITNLSDSGSEDNNESSFE 198
>X75541-1|CAA53229.1| 1355|Drosophila melanogaster spalt protein
protein.
Length = 1355
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +1
Query: 52 RCFRCYRSCGCRQPHQAHFRTRNHRFPSSRRWC 150
+C C R C+ Q H+RT P R C
Sbjct: 825 QCVVCDRVLSCKSALQMHYRTHTGERPFKCRIC 857
>BT024230-1|ABC86292.1| 1283|Drosophila melanogaster LD24322p
protein.
Length = 1283
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/36 (27%), Positives = 15/36 (41%)
Frame = +1
Query: 43 EILRCFRCYRSCGCRQPHQAHFRTRNHRFPSSRRWC 150
++ C C ++ G R Q H R P R+C
Sbjct: 616 KLFPCLECGKTFGSRSSQQIHVRIHTGERPYGCRYC 651
>AY094956-1|AAM11309.1| 897|Drosophila melanogaster SD01232p
protein.
Length = 897
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/36 (27%), Positives = 15/36 (41%)
Frame = +1
Query: 43 EILRCFRCYRSCGCRQPHQAHFRTRNHRFPSSRRWC 150
++ C C ++ G R Q H R P R+C
Sbjct: 310 KLFPCLECGKTFGSRSSQQIHVRIHTGERPYGCRYC 345
>AE014298-1457|AAN09261.3| 2309|Drosophila melanogaster CG17255-PB,
isoform B protein.
Length = 2309
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = -1
Query: 139 GKREIDDFGCENGLGGVGDSHSYDSNESNEE 47
G+R D+G G GG G Y S E
Sbjct: 1108 GQRNASDWGSSRGSGGAGGRRYYGSGGEQSE 1138
>AE014298-1456|AAF46591.4| 2309|Drosophila melanogaster CG17255-PA,
isoform A protein.
Length = 2309
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = -1
Query: 139 GKREIDDFGCENGLGGVGDSHSYDSNESNEE 47
G+R D+G G GG G Y S E
Sbjct: 1108 GQRNASDWGSSRGSGGAGGRRYYGSGGEQSE 1138
>AE014297-1869|AAF55074.1| 1283|Drosophila melanogaster CG7987-PB,
isoform B protein.
Length = 1283
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/36 (27%), Positives = 15/36 (41%)
Frame = +1
Query: 43 EILRCFRCYRSCGCRQPHQAHFRTRNHRFPSSRRWC 150
++ C C ++ G R Q H R P R+C
Sbjct: 616 KLFPCLECGKTFGSRSSQQIHVRIHTGERPYGCRYC 651
>AE014297-1868|AAF55075.1| 1283|Drosophila melanogaster CG7987-PA,
isoform A protein.
Length = 1283
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/36 (27%), Positives = 15/36 (41%)
Frame = +1
Query: 43 EILRCFRCYRSCGCRQPHQAHFRTRNHRFPSSRRWC 150
++ C C ++ G R Q H R P R+C
Sbjct: 616 KLFPCLECGKTFGSRSSQQIHVRIHTGERPYGCRYC 651
>AE014134-2066|AAF53097.3| 1365|Drosophila melanogaster CG6464-PA
protein.
Length = 1365
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +1
Query: 52 RCFRCYRSCGCRQPHQAHFRTRNHRFPSSRRWC 150
+C C R C+ Q H+RT P R C
Sbjct: 825 QCVVCDRVLSCKSALQMHYRTHTGERPFKCRIC 857
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,664,324
Number of Sequences: 53049
Number of extensions: 91205
Number of successful extensions: 491
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 491
length of database: 24,988,368
effective HSP length: 31
effective length of database: 23,343,849
effective search space used: 443533131
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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