Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28f19
         (474 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13293-1|CAA31655.1|  700|Homo sapiens protein ( Human mRNA for ...    32   1.2  
BC053555-1|AAH53555.1|  700|Homo sapiens v-myb myeloblastosis vi...    32   1.2  
BC007585-1|AAH07585.1|  700|Homo sapiens v-myb myeloblastosis vi...    32   1.2  
AL121886-2|CAC08392.1|  700|Homo sapiens v-myb myeloblastosis vi...    32   1.2  
AK223482-1|BAD97202.1|  700|Homo sapiens MYB-related protein B v...    32   1.2  

>X13293-1|CAA31655.1|  700|Homo sapiens protein ( Human mRNA for
           B-myb gene. ).
          Length = 700

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +2

Query: 2   IILRAVTTQTTSVSFLRLRKRNSLTICSRDVAALPYIPTRAVNF 133
           + L  VT  +TS+SFL     NSLT  S  V  LP+ P++ +NF
Sbjct: 418 VALSPVTENSTSLSFLD--SCNSLTPKSTPVKTLPFSPSQFLNF 459


>BC053555-1|AAH53555.1|  700|Homo sapiens v-myb myeloblastosis viral
           oncogene homolog (avian)-like 2 protein.
          Length = 700

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +2

Query: 2   IILRAVTTQTTSVSFLRLRKRNSLTICSRDVAALPYIPTRAVNF 133
           + L  VT  +TS+SFL     NSLT  S  V  LP+ P++ +NF
Sbjct: 418 VALSPVTENSTSLSFLD--SCNSLTPKSTPVKTLPFSPSQFLNF 459


>BC007585-1|AAH07585.1|  700|Homo sapiens v-myb myeloblastosis viral
           oncogene homolog (avian)-like 2 protein.
          Length = 700

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +2

Query: 2   IILRAVTTQTTSVSFLRLRKRNSLTICSRDVAALPYIPTRAVNF 133
           + L  VT  +TS+SFL     NSLT  S  V  LP+ P++ +NF
Sbjct: 418 VALSPVTENSTSLSFLD--SCNSLTPKSTPVKTLPFSPSQFLNF 459


>AL121886-2|CAC08392.1|  700|Homo sapiens v-myb myeloblastosis viral
           oncogene homolog (avian)-like 2 protein.
          Length = 700

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +2

Query: 2   IILRAVTTQTTSVSFLRLRKRNSLTICSRDVAALPYIPTRAVNF 133
           + L  VT  +TS+SFL     NSLT  S  V  LP+ P++ +NF
Sbjct: 418 VALSPVTENSTSLSFLD--SCNSLTPKSTPVKTLPFSPSQFLNF 459


>AK223482-1|BAD97202.1|  700|Homo sapiens MYB-related protein B
           variant protein.
          Length = 700

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +2

Query: 2   IILRAVTTQTTSVSFLRLRKRNSLTICSRDVAALPYIPTRAVNF 133
           + L  VT  +TS+SFL     NSLT  S  V  LP+ P++ +NF
Sbjct: 418 VALSPVTENSTSLSFLD--SCNSLTPKSTPVKTLPFSPSQFLNF 459


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,062,973
Number of Sequences: 237096
Number of extensions: 942474
Number of successful extensions: 1576
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1576
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)