Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28f19
         (474 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060992-1|AAL28540.1|  250|Drosophila melanogaster HL01138p pro...    31   1.1  
AE014296-706|AAF47802.1|  250|Drosophila melanogaster CG1079-PA ...    31   1.1  
AY069413-1|AAL39558.1|  420|Drosophila melanogaster LD11027p pro...    29   4.2  
AE014134-543|AAN10406.1|  420|Drosophila melanogaster CG17257-PB...    29   4.2  
AE014134-542|AAF51157.2|  420|Drosophila melanogaster CG17257-PA...    29   4.2  
AY071589-1|AAL49211.1|  384|Drosophila melanogaster RE64245p pro...    27   9.8  

>AY060992-1|AAL28540.1|  250|Drosophila melanogaster HL01138p
           protein.
          Length = 250

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +2

Query: 116 TRAVNFIDGSIFYIFILCNFLVIVDFCFYYII 211
           T+ V  + G + Y FI+C  L+ +D+C +Y++
Sbjct: 163 TKIVQLLGGQVPY-FIICYILICMDYCKWYVM 193


>AE014296-706|AAF47802.1|  250|Drosophila melanogaster CG1079-PA
           protein.
          Length = 250

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +2

Query: 116 TRAVNFIDGSIFYIFILCNFLVIVDFCFYYII 211
           T+ V  + G + Y FI+C  L+ +D+C +Y++
Sbjct: 163 TKIVQLLGGQVPY-FIICYILICMDYCKWYVM 193


>AY069413-1|AAL39558.1|  420|Drosophila melanogaster LD11027p
           protein.
          Length = 420

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 439 HITTPCHTCMAFVIVCLRLMTC 374
           HI   C  C+ F +VC RL+TC
Sbjct: 46  HILGCCCNCVDFDLVCTRLVTC 67


>AE014134-543|AAN10406.1|  420|Drosophila melanogaster CG17257-PB,
           isoform B protein.
          Length = 420

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 439 HITTPCHTCMAFVIVCLRLMTC 374
           HI   C  C+ F +VC RL+TC
Sbjct: 46  HILGCCCNCVDFDLVCTRLVTC 67


>AE014134-542|AAF51157.2|  420|Drosophila melanogaster CG17257-PA,
           isoform A protein.
          Length = 420

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 439 HITTPCHTCMAFVIVCLRLMTC 374
           HI   C  C+ F +VC RL+TC
Sbjct: 46  HILGCCCNCVDFDLVCTRLVTC 67


>AY071589-1|AAL49211.1|  384|Drosophila melanogaster RE64245p
           protein.
          Length = 384

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 5   ILRAVTTQTTSVSFLRLRKRNSLTICSRDV 94
           +LR +   +TS  FLR RK+ + ++C R V
Sbjct: 253 LLRLLKRNSTSPWFLRWRKKRNQSVCCRPV 282


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,336,890
Number of Sequences: 53049
Number of extensions: 306321
Number of successful extensions: 625
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1622204766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)