Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28f19
(474 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 1.7
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 2.2
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 22 3.8
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 6.7
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 6.7
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 6.7
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 6.7
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 21 8.9
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 8.9
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 8.9
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 21 8.9
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.0 bits (47), Expect = 1.7
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -2
Query: 467 RPSQLISAPAHNNTMPYLYGLCDCLPSS 384
R S+ ++A AH+ P CD +P +
Sbjct: 58 RSSESLTAQAHHRLYPAFSSSCDPVPGN 85
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.6 bits (46), Expect = 2.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 41 SFLRLRKRNSLTICSRDVAALP 106
SFL LR+ ++L I +V ALP
Sbjct: 142 SFLGLRELHTLEIVESNVQALP 163
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 21.8 bits (44), Expect = 3.8
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -3
Query: 52 SEKANGCSLCRYRSKND 2
+++ N C L + RS+ND
Sbjct: 6 TQRINSCDLLKKRSEND 22
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.0 bits (42), Expect = 6.7
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +3
Query: 408 AIQVWHGVVMC 440
A+ VW GV MC
Sbjct: 362 AMNVWDGVCMC 372
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.0 bits (42), Expect = 6.7
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +3
Query: 408 AIQVWHGVVMC 440
A+ VW GV MC
Sbjct: 331 AMNVWDGVCMC 341
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.0 bits (42), Expect = 6.7
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +3
Query: 408 AIQVWHGVVMC 440
A+ VW GV MC
Sbjct: 382 AMNVWDGVCMC 392
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.0 bits (42), Expect = 6.7
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +3
Query: 408 AIQVWHGVVMC 440
A+ VW GV MC
Sbjct: 331 AMNVWDGVCMC 341
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 20.6 bits (41), Expect = 8.9
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = -3
Query: 52 SEKANGCSLCRYRSKND 2
+++ N C L + R++ND
Sbjct: 6 TQRINSCDLLKKRNEND 22
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 20.6 bits (41), Expect = 8.9
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 402 TKAIQVWHGVVM 437
TKAI +W GV +
Sbjct: 301 TKAIDIWTGVCL 312
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 20.6 bits (41), Expect = 8.9
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 402 TKAIQVWHGVVM 437
TKAI +W GV +
Sbjct: 301 TKAIDIWTGVCL 312
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 20.6 bits (41), Expect = 8.9
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = -3
Query: 52 SEKANGCSLCRYRSKND 2
+++ N C L + R++ND
Sbjct: 127 TQRINSCDLLKKRNEND 143
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,528
Number of Sequences: 438
Number of extensions: 2067
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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