Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28f08
         (544 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029137-1|ABJ17070.1|  215|Drosophila melanogaster RE05423p pro...   213   2e-55
AY051484-1|AAK92908.1|  215|Drosophila melanogaster GH14384p pro...   213   2e-55
AF218125-1|AAF23180.1|  215|Drosophila melanogaster Kisir protein.    213   2e-55
AE014134-1032|AAN10575.1|  215|Drosophila melanogaster CG9131-PB...   213   2e-55
AE014134-1031|AAF52330.1|  215|Drosophila melanogaster CG9131-PA...   213   2e-55
AE013599-861|AAF58939.2|  236|Drosophila melanogaster CG8806-PA ...    70   2e-12
BT001703-1|AAN71458.1|  236|Drosophila melanogaster RE64040p pro...    68   7e-12
AY061437-1|AAL28985.1|  236|Drosophila melanogaster LD36516p pro...    68   7e-12
AY061527-1|AAL29075.1|  246|Drosophila melanogaster LD48010p pro...    28   9.5  
AE014297-943|AAF54381.1|  246|Drosophila melanogaster CG9362-PA ...    28   9.5  

>BT029137-1|ABJ17070.1|  215|Drosophila melanogaster RE05423p
           protein.
          Length = 215

 Score =  213 bits (519), Expect = 2e-55
 Identities = 91/120 (75%), Positives = 103/120 (85%)
 Frame = +3

Query: 183 MKIWTSEHTFNHPWETVAQAAWRKYPNPMNPAVIGTDVVERKVVDGVLHTHRLVSSKWFF 362
           MKIWTSEH FNHPWETV QAAWRKYPNPM P++IGTDVVER+VVDGVLHTHRLV SKW+F
Sbjct: 1   MKIWTSEHIFNHPWETVTQAAWRKYPNPMTPSIIGTDVVERRVVDGVLHTHRLVQSKWYF 60

Query: 363 PRWAQALIGTAKICYASEISXVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPSDSSKT 542
           P+W  ALIGTAK C+ASE S V+P ++QM LKT NLTFC  I+VDE + Y PHPSD+SKT
Sbjct: 61  PKWTHALIGTAKTCFASERSTVDPERKQMVLKTNNLTFCRNISVDEVLYYEPHPSDASKT 120


>AY051484-1|AAK92908.1|  215|Drosophila melanogaster GH14384p
           protein.
          Length = 215

 Score =  213 bits (519), Expect = 2e-55
 Identities = 91/120 (75%), Positives = 103/120 (85%)
 Frame = +3

Query: 183 MKIWTSEHTFNHPWETVAQAAWRKYPNPMNPAVIGTDVVERKVVDGVLHTHRLVSSKWFF 362
           MKIWTSEH FNHPWETV QAAWRKYPNPM P++IGTDVVER+VVDGVLHTHRLV SKW+F
Sbjct: 1   MKIWTSEHIFNHPWETVTQAAWRKYPNPMTPSIIGTDVVERRVVDGVLHTHRLVQSKWYF 60

Query: 363 PRWAQALIGTAKICYASEISXVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPSDSSKT 542
           P+W  ALIGTAK C+ASE S V+P ++QM LKT NLTFC  I+VDE + Y PHPSD+SKT
Sbjct: 61  PKWTHALIGTAKTCFASERSTVDPERKQMVLKTNNLTFCRNISVDEVLYYEPHPSDASKT 120


>AF218125-1|AAF23180.1|  215|Drosophila melanogaster Kisir protein.
          Length = 215

 Score =  213 bits (519), Expect = 2e-55
 Identities = 91/120 (75%), Positives = 103/120 (85%)
 Frame = +3

Query: 183 MKIWTSEHTFNHPWETVAQAAWRKYPNPMNPAVIGTDVVERKVVDGVLHTHRLVSSKWFF 362
           MKIWTSEH FNHPWETV QAAWRKYPNPM P++IGTDVVER+VVDGVLHTHRLV SKW+F
Sbjct: 1   MKIWTSEHIFNHPWETVTQAAWRKYPNPMTPSIIGTDVVERRVVDGVLHTHRLVQSKWYF 60

Query: 363 PRWAQALIGTAKICYASEISXVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPSDSSKT 542
           P+W  ALIGTAK C+ASE S V+P ++QM LKT NLTFC  I+VDE + Y PHPSD+SKT
Sbjct: 61  PKWTHALIGTAKTCFASERSTVDPERKQMVLKTNNLTFCRNISVDEVLYYEPHPSDASKT 120


>AE014134-1032|AAN10575.1|  215|Drosophila melanogaster CG9131-PB,
           isoform B protein.
          Length = 215

 Score =  213 bits (519), Expect = 2e-55
 Identities = 91/120 (75%), Positives = 103/120 (85%)
 Frame = +3

Query: 183 MKIWTSEHTFNHPWETVAQAAWRKYPNPMNPAVIGTDVVERKVVDGVLHTHRLVSSKWFF 362
           MKIWTSEH FNHPWETV QAAWRKYPNPM P++IGTDVVER+VVDGVLHTHRLV SKW+F
Sbjct: 1   MKIWTSEHIFNHPWETVTQAAWRKYPNPMTPSIIGTDVVERRVVDGVLHTHRLVQSKWYF 60

Query: 363 PRWAQALIGTAKICYASEISXVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPSDSSKT 542
           P+W  ALIGTAK C+ASE S V+P ++QM LKT NLTFC  I+VDE + Y PHPSD+SKT
Sbjct: 61  PKWTHALIGTAKTCFASERSTVDPERKQMVLKTNNLTFCRNISVDEVLYYEPHPSDASKT 120


>AE014134-1031|AAF52330.1|  215|Drosophila melanogaster CG9131-PA,
           isoform A protein.
          Length = 215

 Score =  213 bits (519), Expect = 2e-55
 Identities = 91/120 (75%), Positives = 103/120 (85%)
 Frame = +3

Query: 183 MKIWTSEHTFNHPWETVAQAAWRKYPNPMNPAVIGTDVVERKVVDGVLHTHRLVSSKWFF 362
           MKIWTSEH FNHPWETV QAAWRKYPNPM P++IGTDVVER+VVDGVLHTHRLV SKW+F
Sbjct: 1   MKIWTSEHIFNHPWETVTQAAWRKYPNPMTPSIIGTDVVERRVVDGVLHTHRLVQSKWYF 60

Query: 363 PRWAQALIGTAKICYASEISXVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPSDSSKT 542
           P+W  ALIGTAK C+ASE S V+P ++QM LKT NLTFC  I+VDE + Y PHPSD+SKT
Sbjct: 61  PKWTHALIGTAKTCFASERSTVDPERKQMVLKTNNLTFCRNISVDEVLYYEPHPSDASKT 120


>AE013599-861|AAF58939.2|  236|Drosophila melanogaster CG8806-PA
           protein.
          Length = 236

 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 35/113 (30%), Positives = 57/113 (50%)
 Frame = +3

Query: 198 SEHTFNHPWETVAQAAWRKYPNPMNPAVIGTDVVERKVVDGVLHTHRLVSSKWFFPRWAQ 377
           +E  F++ W  V  A W +YPNP +  V+  D ++R+V DG L + RL+S     P+W  
Sbjct: 10  TETVFDYSWMNVVVAYWNRYPNPSSTHVLTEDTIQREVRDGKLFSRRLLSKTNPVPKWGA 69

Query: 378 ALIGTAKICYASEISXVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPSDSS 536
                  +    E S ++P+++  T  T NL     +A+DE V Y+     S+
Sbjct: 70  RFYNNVPVKIV-EDSVLDPVKKTFTTFTRNLGMTKIMAIDEIVVYSEQKDGST 121


>BT001703-1|AAN71458.1|  236|Drosophila melanogaster RE64040p
           protein.
          Length = 236

 Score = 68.1 bits (159), Expect = 7e-12
 Identities = 35/113 (30%), Positives = 56/113 (49%)
 Frame = +3

Query: 198 SEHTFNHPWETVAQAAWRKYPNPMNPAVIGTDVVERKVVDGVLHTHRLVSSKWFFPRWAQ 377
           +E  F++ W  V  A W +YPNP +  V+  D ++R+V DG L + RL+S     P+W  
Sbjct: 10  TETVFDYSWMNVVVAYWNRYPNPSSTHVLTEDTIQREVRDGKLFSRRLLSKTNPVPKWGA 69

Query: 378 ALIGTAKICYASEISXVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPSDSS 536
                  +    E S ++P+++  T  T NL     + VDE V Y+     S+
Sbjct: 70  RFYNNVPVKIV-EDSVLDPVKKTFTTFTRNLGMTKIMKVDEIVVYSEQKDGST 121


>AY061437-1|AAL28985.1|  236|Drosophila melanogaster LD36516p
           protein.
          Length = 236

 Score = 68.1 bits (159), Expect = 7e-12
 Identities = 35/113 (30%), Positives = 56/113 (49%)
 Frame = +3

Query: 198 SEHTFNHPWETVAQAAWRKYPNPMNPAVIGTDVVERKVVDGVLHTHRLVSSKWFFPRWAQ 377
           +E  F++ W  V  A W +YPNP +  V+  D ++R+V DG L + RL+S     P+W  
Sbjct: 10  TETVFDYSWMNVVVAYWNRYPNPSSTHVLTEDTIQREVRDGKLFSRRLLSKTNPVPKWGA 69

Query: 378 ALIGTAKICYASEISXVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPSDSS 536
                  +    E S ++P+++  T  T NL     + VDE V Y+     S+
Sbjct: 70  RFYNNVPVKIV-EDSVLDPVKKTFTTFTRNLGMTKIMKVDEIVVYSEQKDGST 121


>AY061527-1|AAL29075.1|  246|Drosophila melanogaster LD48010p
           protein.
          Length = 246

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +3

Query: 405 YASEISXVNPIQRQMTLKTTNLTFCHYIAVDETVRYT-PHPS 527
           Y  E   VNP+Q+  +LK    T C  +A+   +  T P P+
Sbjct: 75  YTDEYREVNPMQKVPSLKIDGHTLCDSVAIIHYLEETRPQPA 116


>AE014297-943|AAF54381.1|  246|Drosophila melanogaster CG9362-PA
           protein.
          Length = 246

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +3

Query: 405 YASEISXVNPIQRQMTLKTTNLTFCHYIAVDETVRYT-PHPS 527
           Y  E   VNP+Q+  +LK    T C  +A+   +  T P P+
Sbjct: 75  YTDEYREVNPMQKVPSLKIDGHTLCDSVAIIHYLEETRPQPA 116


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,993,238
Number of Sequences: 53049
Number of extensions: 480335
Number of successful extensions: 870
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2074444800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)