Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28f06
         (302 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071617-1|AAL49239.1|  182|Drosophila melanogaster RE66546p pro...    26   8.0  
AY071388-1|AAL49010.1|  182|Drosophila melanogaster RE42847p pro...    26   8.0  
AE014297-3381|AAF56180.1|  182|Drosophila melanogaster CG10219-P...    26   8.0  

>AY071617-1|AAL49239.1|  182|Drosophila melanogaster RE66546p
           protein.
          Length = 182

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -3

Query: 150 DILVPVLLNNVINKCPAIMLAVNRTAKVPGRIIFLMVSIITINGIK 13
           D + P ++ NV+ K   I L +   A + G   F+   +   NGIK
Sbjct: 124 DYMRPSVVGNVLPKVAHIALIIISVATLGGLFYFIQNDVGLANGIK 169


>AY071388-1|AAL49010.1|  182|Drosophila melanogaster RE42847p
           protein.
          Length = 182

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -3

Query: 150 DILVPVLLNNVINKCPAIMLAVNRTAKVPGRIIFLMVSIITINGIK 13
           D + P ++ NV+ K   I L +   A + G   F+   +   NGIK
Sbjct: 124 DYMRPSVVGNVLPKVAHIALIIISVATLGGLFYFIQNDVGLANGIK 169


>AE014297-3381|AAF56180.1|  182|Drosophila melanogaster CG10219-PA
           protein.
          Length = 182

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -3

Query: 150 DILVPVLLNNVINKCPAIMLAVNRTAKVPGRIIFLMVSIITINGIK 13
           D + P ++ NV+ K   I L +   A + G   F+   +   NGIK
Sbjct: 124 DYMRPSVVGNVLPKVAHIALIIISVATLGGLFYFIQNDVGLANGIK 169


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,544,444
Number of Sequences: 53049
Number of extensions: 48782
Number of successful extensions: 101
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 101
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 570126357
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)