Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28f06
(302 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein ... 22 1.4
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 1.4
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 4.4
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 4.4
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 4.4
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 4.4
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 4.4
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 4.4
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 4.4
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 4.4
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 20 5.8
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 20 7.7
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 20 7.7
>DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein 5
protein.
Length = 104
Score = 22.2 bits (45), Expect = 1.4
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -3
Query: 144 LVPVLLNNVINKCPAIMLAVNRT 76
L+P +LNN N+C + + + T
Sbjct: 56 LLPEVLNNHCNRCTSRQIGIANT 78
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.2 bits (45), Expect = 1.4
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 4 TLYFNTIYSNY*NHQKYYS 60
T++ N Y+NY N + YY+
Sbjct: 311 TIHNNNNYNNYNNKKLYYN 329
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 4.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 1 NTLYFNTIYSNY*NHQKYYST 63
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 4.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 1 NTLYFNTIYSNY*NHQKYYST 63
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 4.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 1 NTLYFNTIYSNY*NHQKYYST 63
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 4.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 1 NTLYFNTIYSNY*NHQKYYST 63
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 4.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 1 NTLYFNTIYSNY*NHQKYYST 63
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 4.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 1 NTLYFNTIYSNY*NHQKYYST 63
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 4.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 1 NTLYFNTIYSNY*NHQKYYST 63
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.6 bits (41), Expect = 4.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 72 KVPGRIIFLMVSIIT 28
KV R+ LM+S+IT
Sbjct: 635 KVADRVSMLMISVIT 649
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 20.2 bits (40), Expect = 5.8
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 1 NTLYFNTIYSNY*NHQKYYSTWN 69
++L NTI++N N + YY+ N
Sbjct: 316 SSLSNNTIHNNNYNKKLYYNIIN 338
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 19.8 bits (39), Expect = 7.7
Identities = 5/8 (62%), Positives = 7/8 (87%)
Frame = -2
Query: 40 FNNYYKWY 17
+NNYY W+
Sbjct: 142 YNNYYIWH 149
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 19.8 bits (39), Expect = 7.7
Identities = 5/8 (62%), Positives = 7/8 (87%)
Frame = -2
Query: 40 FNNYYKWY 17
+NNYY W+
Sbjct: 142 YNNYYIWH 149
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,917
Number of Sequences: 438
Number of extensions: 486
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 6368931
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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