Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28e22
(252 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC31F10.16 |||ChAPs family protein|Schizosaccharomyces pombe|c... 28 0.22
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 27 0.38
SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces p... 26 0.88
SPAC3F10.02c |trk1|sptrk|potassium ion transporter Trk1|Schizosa... 25 2.0
SPBC16H5.02 |pfk1||6-phosphofructokinase |Schizosaccharomyces po... 24 2.7
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 24 2.7
SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce... 24 2.7
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 23 4.7
SPBC1683.13c |||transcription factor |Schizosaccharomyces pombe|... 23 4.7
SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|c... 23 6.2
SPAC26A3.01 |sxa1|SPAC2E1P5.06|aspartic protease Sxa1 |Schizosac... 23 8.2
SPAC1002.19 |urg1||GTP cyclohydrolase II |Schizosaccharomyces po... 23 8.2
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 23 8.2
SPBC1539.01c |||mitochondrial ribosomal protein subunit L15|Schi... 23 8.2
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 23 8.2
>SPBC31F10.16 |||ChAPs family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 679
Score = 27.9 bits (59), Expect = 0.22
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 73 FYVLLKTSKMKTIYFVLLISVCAVSAIYLPDDSISADLDK 192
FYVLL +SK+ T +FV + + +++ +++S LDK
Sbjct: 75 FYVLLTSSKVGTYHFVSGVDASSSASLAAYLNTLSYSLDK 114
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 27.1 bits (57), Expect = 0.38
Identities = 15/58 (25%), Positives = 31/58 (53%)
Frame = +1
Query: 76 YVLLKTSKMKTIYFVLLISVCAVSAIYLPDDSISADLDKYKSESFGSKLYSESKSYDD 249
++ KT K + LL++ + Y+PD+S SA+ +++ + + S S S++D
Sbjct: 233 HMYYKTGKTDNNFHFLLVATLCLGYTYMPDESPSANYPYHEAYEYYYYIRS-SFSWED 289
>SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 254
Score = 25.8 bits (54), Expect = 0.88
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 70 AFYVLLKTSKMKTIYFVLLISVC 138
AFY LLK K+K I F ++ C
Sbjct: 125 AFYHLLKEGKLKNIVFTSSMAAC 147
>SPAC3F10.02c |trk1|sptrk|potassium ion transporter
Trk1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 841
Score = 24.6 bits (51), Expect = 2.0
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 154 YLPDDSISADLDKYKSESFGSKLYSESKSYDDD 252
Y PD+ S D K E FG L +S + D D
Sbjct: 178 YFPDNPPSPKADISKDEYFGKYLPKKSDTLDMD 210
>SPBC16H5.02 |pfk1||6-phosphofructokinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 942
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 133 VCAVSAIYLPDDSISADL 186
+ SAIY P+D IS D+
Sbjct: 771 ITGASAIYTPEDGISLDM 788
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 24.2 bits (50), Expect = 2.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 39 INLAYLTNEFCFLCATEDFQNENHLLRFTNKR 134
+N +L N + F T+D E H L N+R
Sbjct: 1277 VNGCFLGNTYAFASVTQDGSVEVHRLDVNNQR 1308
>SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1418
Score = 24.2 bits (50), Expect = 2.7
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = +3
Query: 30 PTSINLAYLTNEFCFLCATEDFQNENHLLRFTNK 131
P L+ + E CFLC T F + NK
Sbjct: 1320 PAHCPLSIVPLEICFLCGTPHFSGRDTCPMLRNK 1353
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 23.4 bits (48), Expect = 4.7
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 69 CFLCATEDFQNENHLL 116
CF C EDF + H L
Sbjct: 1522 CFFCRWEDFLKQQHKL 1537
>SPBC1683.13c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 618
Score = 23.4 bits (48), Expect = 4.7
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +1
Query: 121 LLISVCAVSAIYLPDDSI 174
LL ++C++ A+ PDD +
Sbjct: 220 LLFAICSIGAMISPDDDL 237
>SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 23.0 bits (47), Expect = 6.2
Identities = 15/66 (22%), Positives = 26/66 (39%)
Frame = +1
Query: 22 SYDQQVLIWRI*RTNFAFYVLLKTSKMKTIYFVLLISVCAVSAIYLPDDSISADLDKYKS 201
SY Q I + NF F +M I + V + + + + +S + +YK
Sbjct: 521 SYSQIASIPNVSEKNFVFNAYANAIRMIWIVNCPVAGVGMLLSFFTKQEKLSQSVTEYKE 580
Query: 202 ESFGSK 219
+ G K
Sbjct: 581 KDKGFK 586
>SPAC26A3.01 |sxa1|SPAC2E1P5.06|aspartic protease Sxa1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 533
Score = 22.6 bits (46), Expect = 8.2
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = +1
Query: 151 IYLPDDSISADLDKYK 198
IYLP+D++ + D+Y+
Sbjct: 331 IYLPEDTVESIADQYQ 346
>SPAC1002.19 |urg1||GTP cyclohydrolase II |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 439
Score = 22.6 bits (46), Expect = 8.2
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 142 VSAIYLPDDSISADLDKYKSESFGSKLYSESKSYDDD 252
++ I +PDD I D S +SE K +DD
Sbjct: 394 LNRITIPDDLIPEDSQVEIDAKIQSGYFSEKKVTEDD 430
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 22.6 bits (46), Expect = 8.2
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +3
Query: 57 TNEFCFLCATEDFQNENHLL 116
+ CF+C TE + E++ L
Sbjct: 79 SKHLCFICTTEKIKREDYEL 98
>SPBC1539.01c |||mitochondrial ribosomal protein subunit
L15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 210
Score = 22.6 bits (46), Expect = 8.2
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 169 SISADLDKYKSESFGSKLYSESKS 240
S D+D + S FG K Y KS
Sbjct: 46 STEEDIDSFFSRVFGEKNYISDKS 69
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 22.6 bits (46), Expect = 8.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 203 SDLYLSRSAEIESSGKYI 150
SDL L RS+EI G Y+
Sbjct: 578 SDLLLDRSSEIGLDGTYL 595
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 910,823
Number of Sequences: 5004
Number of extensions: 14226
Number of successful extensions: 49
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 2,362,478
effective HSP length: 60
effective length of database: 2,062,238
effective search space used: 47431474
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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