Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28e22
         (252 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC060838-1|AAH60838.1|  416|Homo sapiens ARNT protein protein.         29   2.1  
Y18859-1|CAC21446.1|  789|Homo sapiens aryl hydrocarbon receptor...    29   3.6  
M69238-1|AAA51777.1|  789|Homo sapiens Arnt protein.                   29   3.6  
AY430083-1|AAQ96598.1|  789|Homo sapiens aryl hydrocarbon recept...    29   3.6  
AL834279-1|CAD38953.1|  849|Homo sapiens hypothetical protein pr...    29   3.6  
AL355860-3|CAI12797.1|  789|Homo sapiens aryl hydrocarbon recept...    29   3.6  
AK223459-1|BAD97179.1|  315|Homo sapiens aryl hydrocarbon recept...    29   3.6  
AF001307-1|AAC03365.1|  328|Homo sapiens aryl hydrocarbon recept...    29   3.6  
AB209877-1|BAD93114.1|  791|Homo sapiens aryl hydrocarbon recept...    29   3.6  

>BC060838-1|AAH60838.1|  416|Homo sapiens ARNT protein protein.
          Length = 416

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +1

Query: 115 FVLLISVCAVSAIYLPDDSISADLDKYKSESFGSKLYSESKSYDDD 252
           F+ ++S C    +    DS++  L++ +SE FGS LY +    D D
Sbjct: 175 FLFIVS-CETGRVVYVSDSVTPVLNQQQSEWFGSTLYDQVHPDDVD 219


>Y18859-1|CAC21446.1|  789|Homo sapiens aryl hydrocarbon receptor
           nuclear translocator, ARNT protein.
          Length = 789

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +1

Query: 115 FVLLISVCAVSAIYLPDDSISADLDKYKSESFGSKLYSESKSYDDD 252
           F+ ++S C    +    DS++  L++ +SE FGS LY +    D D
Sbjct: 175 FLFIVS-CETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVD 219


>M69238-1|AAA51777.1|  789|Homo sapiens Arnt protein.
          Length = 789

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +1

Query: 115 FVLLISVCAVSAIYLPDDSISADLDKYKSESFGSKLYSESKSYDDD 252
           F+ ++S C    +    DS++  L++ +SE FGS LY +    D D
Sbjct: 175 FLFIVS-CETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVD 219


>AY430083-1|AAQ96598.1|  789|Homo sapiens aryl hydrocarbon receptor
           nuclear translocator protein.
          Length = 789

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +1

Query: 115 FVLLISVCAVSAIYLPDDSISADLDKYKSESFGSKLYSESKSYDDD 252
           F+ ++S C    +    DS++  L++ +SE FGS LY +    D D
Sbjct: 175 FLFIVS-CETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVD 219


>AL834279-1|CAD38953.1|  849|Homo sapiens hypothetical protein
           protein.
          Length = 849

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +1

Query: 115 FVLLISVCAVSAIYLPDDSISADLDKYKSESFGSKLYSESKSYDDD 252
           F+ ++S C    +    DS++  L++ +SE FGS LY +    D D
Sbjct: 240 FLFIVS-CETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVD 284


>AL355860-3|CAI12797.1|  789|Homo sapiens aryl hydrocarbon receptor
           nuclear translocator protein.
          Length = 789

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +1

Query: 115 FVLLISVCAVSAIYLPDDSISADLDKYKSESFGSKLYSESKSYDDD 252
           F+ ++S C    +    DS++  L++ +SE FGS LY +    D D
Sbjct: 175 FLFIVS-CETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVD 219


>AK223459-1|BAD97179.1|  315|Homo sapiens aryl hydrocarbon receptor
           nuclear translocator isoform 2 variant protein.
          Length = 315

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +1

Query: 115 FVLLISVCAVSAIYLPDDSISADLDKYKSESFGSKLYSESKSYDDD 252
           F+ ++S C    +    DS++  L++ +SE FGS LY +    D D
Sbjct: 175 FLFIVS-CETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVD 219


>AF001307-1|AAC03365.1|  328|Homo sapiens aryl hydrocarbon receptor
           nuclear translocator protein.
          Length = 328

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +1

Query: 115 FVLLISVCAVSAIYLPDDSISADLDKYKSESFGSKLYSESKSYDDD 252
           F+ ++S C    +    DS++  L++ +SE FGS LY +    D D
Sbjct: 175 FLFIVS-CETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVD 219


>AB209877-1|BAD93114.1|  791|Homo sapiens aryl hydrocarbon receptor
           nuclear translocator isoform 1 variant protein.
          Length = 791

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +1

Query: 115 FVLLISVCAVSAIYLPDDSISADLDKYKSESFGSKLYSESKSYDDD 252
           F+ ++S C    +    DS++  L++ +SE FGS LY +    D D
Sbjct: 179 FLFIVS-CETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVD 223


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,079,849
Number of Sequences: 237096
Number of extensions: 408234
Number of successful extensions: 729
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 76,859,062
effective HSP length: 61
effective length of database: 62,396,206
effective search space used: 1372716532
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)