Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28e21
(419 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81489-14|CAN86572.1| 420|Caenorhabditis elegans Hypothetical p... 108 1e-24
Z81489-13|CAB04012.1| 426|Caenorhabditis elegans Hypothetical p... 108 1e-24
Z81087-2|CAN86636.1| 420|Caenorhabditis elegans Hypothetical pr... 108 1e-24
Z81087-1|CAB03122.1| 426|Caenorhabditis elegans Hypothetical pr... 108 1e-24
U61948-8|AAB03147.2| 782|Caenorhabditis elegans Human hcf1 rela... 47 5e-06
AF072907-1|AAD12580.1| 782|Caenorhabditis elegans host cell fac... 47 5e-06
Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical pr... 44 6e-05
Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical pr... 44 6e-05
AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin pro... 44 6e-05
AC024801-9|AAF59653.3| 791|Caenorhabditis elegans Hypothetical ... 33 0.11
U00043-5|AAN65292.1| 505|Caenorhabditis elegans Hypothetical pr... 29 1.0
U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical pr... 29 1.0
AF016447-10|AAG24008.1| 314|Caenorhabditis elegans Hypothetical... 29 1.8
Z70686-2|CAA94610.1| 570|Caenorhabditis elegans Hypothetical pr... 28 2.4
U20142-2|AAB60235.1| 570|Caenorhabditis elegans SPE-26 protein ... 28 2.4
Z81525-7|CAE17780.1| 263|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z93388-1|CAB07658.1| 355|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z92829-10|CAB07350.2| 319|Caenorhabditis elegans Hypothetical p... 27 7.2
Z83116-3|CAB05561.1| 284|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z70267-1|CAA94211.1| 307|Caenorhabditis elegans Hypothetical pr... 27 7.2
AL117202-22|CAB57900.1| 691|Caenorhabditis elegans Hypothetical... 27 7.2
Z92829-16|CAE46671.1| 284|Caenorhabditis elegans Hypothetical p... 26 9.5
Z92804-6|CAE46675.1| 284|Caenorhabditis elegans Hypothetical pr... 26 9.5
DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein. 26 9.5
AL023847-5|CAA19551.1| 247|Caenorhabditis elegans Hypothetical ... 26 9.5
AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical ... 26 9.5
>Z81489-14|CAN86572.1| 420|Caenorhabditis elegans Hypothetical
protein F53E4.1b protein.
Length = 420
Score = 108 bits (260), Expect = 1e-24
Identities = 56/122 (45%), Positives = 70/122 (57%), Gaps = 23/122 (18%)
Frame = +2
Query: 119 WTVHIEGGPMRVNHAAVCIGDKIYSFGGYCSTEEYKDWEPIPVHILNTATLRWTSVN--- 289
WTVH+EGGP RVNHA++ +G +IYSFGGYCS E +P+ VH+LNT RW +N
Sbjct: 4 WTVHLEGGPRRVNHASIAVGSRIYSFGGYCSGEVTDAKDPLDVHVLNTENYRWIKMNPGY 63
Query: 290 ---------------YKRSD----VXPFQRYGHTAVAYGHKVYMWGGRNNAV-ACDTLSC 409
Y SD P+QRYGHT V Y K Y+WGGRN+ AC+ L
Sbjct: 64 VYNNRIITKATIESPYSDSDKMFGAVPYQRYGHTVVEYQGKAYVWGGRNDDYGACNLLHE 123
Query: 410 FD 415
+D
Sbjct: 124 YD 125
Score = 40.7 bits (91), Expect = 4e-04
Identities = 34/117 (29%), Positives = 46/117 (39%), Gaps = 9/117 (7%)
Frame = +2
Query: 92 FLNSIATMKWT-VHIEGGPMRVN--HAAVCIGDKIYSFGGYCSTE----EYKDWEPIPVH 250
++ AT W +H + P R H A I +Y FGG D +
Sbjct: 174 YVFDFATSTWREMHTKNDPPRWRDFHTASVIDGMMYIFGGRSDESGQFHTIHDQYDDTLM 233
Query: 251 ILNTATLRWTSVNYKRSDVXPFQRYGHTAVAYGHKVYMWGGRNNA--VACDTLSCFD 415
LN AT WT + + P R H+ Y K+YM+GG V + L CFD
Sbjct: 234 ALNLATGAWTRTKVPENTMKPGGRRSHSTWVYDGKMYMFGGYLGTINVHYNELYCFD 290
Score = 37.9 bits (84), Expect = 0.003
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = +2
Query: 125 VHIEG--GPMRVNHAAVCIGDKIYSFGGYCSTEEYKDWEPIPVHILNTATLRWTSVNYKR 298
V IEG P R H AV ++++ FGGY EE ++ + AT W ++ K
Sbjct: 134 VEIEGFVPPSRDGHTAVVWNNQMFVFGGY---EEDAQRFSQETYVFDFATSTWREMHTKN 190
Query: 299 SDVXPFQRYGHTAVAYGHKVYMWGGRNN 382
P R HTA +Y++GGR++
Sbjct: 191 D--PPRWRDFHTASVIDGMMYIFGGRSD 216
Score = 34.7 bits (76), Expect = 0.027
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 5/116 (4%)
Frame = +2
Query: 74 FEATVFFLNSIATMKWT-VHIEGGPM----RVNHAAVCIGDKIYSFGGYCSTEEYKDWEP 238
++ T+ LN +AT WT + M R +H+ K+Y FGGY T E
Sbjct: 228 YDDTLMALN-LATGAWTRTKVPENTMKPGGRRSHSTWVYDGKMYMFGGYLGTINVHYNE- 285
Query: 239 IPVHILNTATLRWTSVNYKRSDVXPFQRYGHTAVAYGHKVYMWGGRNNAVACDTLS 406
++ + T W+ ++ + + P R H +V KVY++GG + C LS
Sbjct: 286 --LYCFDPKTSMWSVISVRGT--YPSARRRHCSVVSNGKVYLFGG-TMPLPCHPLS 336
>Z81489-13|CAB04012.1| 426|Caenorhabditis elegans Hypothetical
protein F53E4.1a protein.
Length = 426
Score = 108 bits (260), Expect = 1e-24
Identities = 56/122 (45%), Positives = 70/122 (57%), Gaps = 23/122 (18%)
Frame = +2
Query: 119 WTVHIEGGPMRVNHAAVCIGDKIYSFGGYCSTEEYKDWEPIPVHILNTATLRWTSVN--- 289
WTVH+EGGP RVNHA++ +G +IYSFGGYCS E +P+ VH+LNT RW +N
Sbjct: 4 WTVHLEGGPRRVNHASIAVGSRIYSFGGYCSGEVTDAKDPLDVHVLNTENYRWIKMNPGY 63
Query: 290 ---------------YKRSD----VXPFQRYGHTAVAYGHKVYMWGGRNNAV-ACDTLSC 409
Y SD P+QRYGHT V Y K Y+WGGRN+ AC+ L
Sbjct: 64 VYNNRIITKATIESPYSDSDKMFGAVPYQRYGHTVVEYQGKAYVWGGRNDDYGACNLLHE 123
Query: 410 FD 415
+D
Sbjct: 124 YD 125
Score = 37.9 bits (84), Expect = 0.003
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = +2
Query: 125 VHIEG--GPMRVNHAAVCIGDKIYSFGGYCSTEEYKDWEPIPVHILNTATLRWTSVNYKR 298
V IEG P R H AV ++++ FGGY EE ++ + AT W ++ K
Sbjct: 134 VEIEGFVPPSRDGHTAVVWNNQMFVFGGY---EEDAQRFSQETYVFDFATSTWREMHTKN 190
Query: 299 SDVXPFQRYGHTAVAYGHKVYMWGGRNN 382
P R HTA +Y++GGR++
Sbjct: 191 D--PPRWRDFHTASVIDGMMYIFGGRSD 216
Score = 37.1 bits (82), Expect = 0.005
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 15/123 (12%)
Frame = +2
Query: 92 FLNSIATMKWT-VHIEGGPMRVN--HAAVCIGDKIYSFGGYCSTEEYKDWEPI--PVH-- 250
++ AT W +H + P R H A I +Y FGG E + +H
Sbjct: 174 YVFDFATSTWREMHTKNDPPRWRDFHTASVIDGMMYIFGGRSDESGQVGDEHLFHTIHDQ 233
Query: 251 ------ILNTATLRWTSVNYKRSDVXPFQRYGHTAVAYGHKVYMWGGRNNA--VACDTLS 406
LN AT WT + + P R H+ Y K+YM+GG V + L
Sbjct: 234 YDDTLMALNLATGAWTRTKVPENTMKPGGRRSHSTWVYDGKMYMFGGYLGTINVHYNELY 293
Query: 407 CFD 415
CFD
Sbjct: 294 CFD 296
Score = 34.7 bits (76), Expect = 0.027
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Frame = +2
Query: 74 FEATVFFLNSIATMKWT-VHIEGGPM----RVNHAAVCIGDKIYSFGGYCSTEEYKDWEP 238
++ T+ LN +AT WT + M R +H+ K+Y FGGY T E
Sbjct: 234 YDDTLMALN-LATGAWTRTKVPENTMKPGGRRSHSTWVYDGKMYMFGGYLGTINVHYNE- 291
Query: 239 IPVHILNTATLRWTSVNYKRSDVXPFQRYGHTAVAYGHKVYMWGGRNNAVACDTLS 406
++ + T W+ ++ + P R H +V KVY++GG + C LS
Sbjct: 292 --LYCFDPKTSMWSVISVR--GTYPSARRRHCSVVSNGKVYLFGG-TMPLPCHPLS 342
>Z81087-2|CAN86636.1| 420|Caenorhabditis elegans Hypothetical
protein F53E4.1b protein.
Length = 420
Score = 108 bits (260), Expect = 1e-24
Identities = 56/122 (45%), Positives = 70/122 (57%), Gaps = 23/122 (18%)
Frame = +2
Query: 119 WTVHIEGGPMRVNHAAVCIGDKIYSFGGYCSTEEYKDWEPIPVHILNTATLRWTSVN--- 289
WTVH+EGGP RVNHA++ +G +IYSFGGYCS E +P+ VH+LNT RW +N
Sbjct: 4 WTVHLEGGPRRVNHASIAVGSRIYSFGGYCSGEVTDAKDPLDVHVLNTENYRWIKMNPGY 63
Query: 290 ---------------YKRSD----VXPFQRYGHTAVAYGHKVYMWGGRNNAV-ACDTLSC 409
Y SD P+QRYGHT V Y K Y+WGGRN+ AC+ L
Sbjct: 64 VYNNRIITKATIESPYSDSDKMFGAVPYQRYGHTVVEYQGKAYVWGGRNDDYGACNLLHE 123
Query: 410 FD 415
+D
Sbjct: 124 YD 125
Score = 40.7 bits (91), Expect = 4e-04
Identities = 34/117 (29%), Positives = 46/117 (39%), Gaps = 9/117 (7%)
Frame = +2
Query: 92 FLNSIATMKWT-VHIEGGPMRVN--HAAVCIGDKIYSFGGYCSTE----EYKDWEPIPVH 250
++ AT W +H + P R H A I +Y FGG D +
Sbjct: 174 YVFDFATSTWREMHTKNDPPRWRDFHTASVIDGMMYIFGGRSDESGQFHTIHDQYDDTLM 233
Query: 251 ILNTATLRWTSVNYKRSDVXPFQRYGHTAVAYGHKVYMWGGRNNA--VACDTLSCFD 415
LN AT WT + + P R H+ Y K+YM+GG V + L CFD
Sbjct: 234 ALNLATGAWTRTKVPENTMKPGGRRSHSTWVYDGKMYMFGGYLGTINVHYNELYCFD 290
Score = 37.9 bits (84), Expect = 0.003
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = +2
Query: 125 VHIEG--GPMRVNHAAVCIGDKIYSFGGYCSTEEYKDWEPIPVHILNTATLRWTSVNYKR 298
V IEG P R H AV ++++ FGGY EE ++ + AT W ++ K
Sbjct: 134 VEIEGFVPPSRDGHTAVVWNNQMFVFGGY---EEDAQRFSQETYVFDFATSTWREMHTKN 190
Query: 299 SDVXPFQRYGHTAVAYGHKVYMWGGRNN 382
P R HTA +Y++GGR++
Sbjct: 191 D--PPRWRDFHTASVIDGMMYIFGGRSD 216
Score = 34.7 bits (76), Expect = 0.027
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 5/116 (4%)
Frame = +2
Query: 74 FEATVFFLNSIATMKWT-VHIEGGPM----RVNHAAVCIGDKIYSFGGYCSTEEYKDWEP 238
++ T+ LN +AT WT + M R +H+ K+Y FGGY T E
Sbjct: 228 YDDTLMALN-LATGAWTRTKVPENTMKPGGRRSHSTWVYDGKMYMFGGYLGTINVHYNE- 285
Query: 239 IPVHILNTATLRWTSVNYKRSDVXPFQRYGHTAVAYGHKVYMWGGRNNAVACDTLS 406
++ + T W+ ++ + + P R H +V KVY++GG + C LS
Sbjct: 286 --LYCFDPKTSMWSVISVRGT--YPSARRRHCSVVSNGKVYLFGG-TMPLPCHPLS 336
>Z81087-1|CAB03122.1| 426|Caenorhabditis elegans Hypothetical
protein F53E4.1a protein.
Length = 426
Score = 108 bits (260), Expect = 1e-24
Identities = 56/122 (45%), Positives = 70/122 (57%), Gaps = 23/122 (18%)
Frame = +2
Query: 119 WTVHIEGGPMRVNHAAVCIGDKIYSFGGYCSTEEYKDWEPIPVHILNTATLRWTSVN--- 289
WTVH+EGGP RVNHA++ +G +IYSFGGYCS E +P+ VH+LNT RW +N
Sbjct: 4 WTVHLEGGPRRVNHASIAVGSRIYSFGGYCSGEVTDAKDPLDVHVLNTENYRWIKMNPGY 63
Query: 290 ---------------YKRSD----VXPFQRYGHTAVAYGHKVYMWGGRNNAV-ACDTLSC 409
Y SD P+QRYGHT V Y K Y+WGGRN+ AC+ L
Sbjct: 64 VYNNRIITKATIESPYSDSDKMFGAVPYQRYGHTVVEYQGKAYVWGGRNDDYGACNLLHE 123
Query: 410 FD 415
+D
Sbjct: 124 YD 125
Score = 37.9 bits (84), Expect = 0.003
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = +2
Query: 125 VHIEG--GPMRVNHAAVCIGDKIYSFGGYCSTEEYKDWEPIPVHILNTATLRWTSVNYKR 298
V IEG P R H AV ++++ FGGY EE ++ + AT W ++ K
Sbjct: 134 VEIEGFVPPSRDGHTAVVWNNQMFVFGGY---EEDAQRFSQETYVFDFATSTWREMHTKN 190
Query: 299 SDVXPFQRYGHTAVAYGHKVYMWGGRNN 382
P R HTA +Y++GGR++
Sbjct: 191 D--PPRWRDFHTASVIDGMMYIFGGRSD 216
Score = 37.1 bits (82), Expect = 0.005
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 15/123 (12%)
Frame = +2
Query: 92 FLNSIATMKWT-VHIEGGPMRVN--HAAVCIGDKIYSFGGYCSTEEYKDWEPI--PVH-- 250
++ AT W +H + P R H A I +Y FGG E + +H
Sbjct: 174 YVFDFATSTWREMHTKNDPPRWRDFHTASVIDGMMYIFGGRSDESGQVGDEHLFHTIHDQ 233
Query: 251 ------ILNTATLRWTSVNYKRSDVXPFQRYGHTAVAYGHKVYMWGGRNNA--VACDTLS 406
LN AT WT + + P R H+ Y K+YM+GG V + L
Sbjct: 234 YDDTLMALNLATGAWTRTKVPENTMKPGGRRSHSTWVYDGKMYMFGGYLGTINVHYNELY 293
Query: 407 CFD 415
CFD
Sbjct: 294 CFD 296
Score = 34.7 bits (76), Expect = 0.027
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Frame = +2
Query: 74 FEATVFFLNSIATMKWT-VHIEGGPM----RVNHAAVCIGDKIYSFGGYCSTEEYKDWEP 238
++ T+ LN +AT WT + M R +H+ K+Y FGGY T E
Sbjct: 234 YDDTLMALN-LATGAWTRTKVPENTMKPGGRRSHSTWVYDGKMYMFGGYLGTINVHYNE- 291
Query: 239 IPVHILNTATLRWTSVNYKRSDVXPFQRYGHTAVAYGHKVYMWGGRNNAVACDTLS 406
++ + T W+ ++ + P R H +V KVY++GG + C LS
Sbjct: 292 --LYCFDPKTSMWSVISVR--GTYPSARRRHCSVVSNGKVYLFGG-TMPLPCHPLS 342
>U61948-8|AAB03147.2| 782|Caenorhabditis elegans Human hcf1 related
protein 1 protein.
Length = 782
Score = 47.2 bits (107), Expect = 5e-06
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 19/111 (17%)
Frame = +2
Query: 143 PM-RVNHAAVCIGDKIYSFGGY------CSTEEY--KDWE-PIPVHILNTATLRWTSVNY 292
PM R H++V IGDK++ +GG+ STE+ K+W+ + N RW ++
Sbjct: 266 PMPRSLHSSVLIGDKMFVYGGWVPLLEHASTEQQTEKEWKCTSSLGCWNITEDRWVPLHL 325
Query: 293 KRSD--VXPFQRYGHTAVAYGHKVYMWGGR-------NNAVACDTLSCFDT 418
SD P R GH A A G ++Y+W GR +N V C + DT
Sbjct: 326 YCSDEDTIPRGRAGHCAAAVGDRMYIWSGRDGYRKAWSNQVCCRDMWLLDT 376
Score = 35.1 bits (77), Expect = 0.021
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 254 LNTATLRWTSVNYK--RSDVXPFQRYGHTAVAYGHKVYMWGG 373
LN TL WT + + R+ + P R H++V G K++++GG
Sbjct: 245 LNLNTLHWTEIKFDDPRTGIPPMPRSLHSSVLIGDKMFVYGG 286
Score = 33.1 bits (72), Expect = 0.083
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = +2
Query: 164 AVCIGDKIYSFGGYCSTEEYKDWEPIPVHILNTATLRWTSVNYK--RSDVXPFQRYGHTA 337
A+ +G+KIY FGG +Y + ++ L + W +N + + P R GH+
Sbjct: 98 AISLGNKIYRFGGMTEYGKYTN----DLYELQSTRWEWRRLNPRVHSNGHLPCPRIGHSF 153
Query: 338 VA--YGHKVYMWGGRNN 382
V K Y++GG +N
Sbjct: 154 VVSQKSQKAYVFGGLSN 170
Score = 26.6 bits (56), Expect = 7.2
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 269 LRWTSVNYKRSDVXPFQRYGHTAVAYGHKVYMWGGRNNAVACDTLSCFDT 418
+RW V + + P R+GH AV + ++GG N + D L ++T
Sbjct: 28 VRWRIVQ-QSTGPNPKPRHGHRAVVLKELIVIFGGGNEGM-IDELHAYNT 75
>AF072907-1|AAD12580.1| 782|Caenorhabditis elegans host cell factor
1 protein.
Length = 782
Score = 47.2 bits (107), Expect = 5e-06
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 19/111 (17%)
Frame = +2
Query: 143 PM-RVNHAAVCIGDKIYSFGGY------CSTEEY--KDWE-PIPVHILNTATLRWTSVNY 292
PM R H++V IGDK++ +GG+ STE+ K+W+ + N RW ++
Sbjct: 266 PMPRSLHSSVLIGDKMFVYGGWVPLLEHASTEQQTEKEWKCTSSLGCWNITEDRWVPLHL 325
Query: 293 KRSD--VXPFQRYGHTAVAYGHKVYMWGGR-------NNAVACDTLSCFDT 418
SD P R GH A A G ++Y+W GR +N V C + DT
Sbjct: 326 YCSDEDTIPRGRAGHCAAAVGDRMYIWSGRDGYRKAWSNQVCCRDMWLLDT 376
Score = 35.1 bits (77), Expect = 0.021
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 254 LNTATLRWTSVNYK--RSDVXPFQRYGHTAVAYGHKVYMWGG 373
LN TL WT + + R+ + P R H++V G K++++GG
Sbjct: 245 LNLNTLHWTEIKFDDPRTGIPPMPRSLHSSVLIGDKMFVYGG 286
Score = 33.1 bits (72), Expect = 0.083
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = +2
Query: 164 AVCIGDKIYSFGGYCSTEEYKDWEPIPVHILNTATLRWTSVNYK--RSDVXPFQRYGHTA 337
A+ +G+KIY FGG +Y + ++ L + W +N + + P R GH+
Sbjct: 98 AISLGNKIYRFGGMTEYGKYTN----DLYELQSTRWEWRRLNPRVHSNGHLPCPRIGHSF 153
Query: 338 VA--YGHKVYMWGGRNN 382
V K Y++GG +N
Sbjct: 154 VVSQKSQKAYVFGGLSN 170
Score = 26.6 bits (56), Expect = 7.2
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 269 LRWTSVNYKRSDVXPFQRYGHTAVAYGHKVYMWGGRNNAVACDTLSCFDT 418
+RW V + + P R+GH AV + ++GG N + D L ++T
Sbjct: 28 VRWRIVQ-QSTGPNPKPRHGHRAVVLKELIVIFGGGNEGM-IDELHAYNT 75
>Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical
protein F33C8.1b protein.
Length = 1234
Score = 43.6 bits (98), Expect = 6e-05
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 149 RVNHAAVCIGDKIYSFGGYCSTEEYKDW--EPIPVHILNTATLRWTSVNYKRSDVXPFQR 322
+ +HA++ I D ++S GG E+ D +P + + N + W+ V S P R
Sbjct: 291 KASHASIAIDDVVWSIGG-----EFFDGSSDPNNIDVYNVTSRIWSKVEV--SGDMPKPR 343
Query: 323 YGHTAVAYGHKVYMWGG 373
+ HT V Y +K+YM+GG
Sbjct: 344 FDHTVVKYKNKLYMFGG 360
Score = 30.3 bits (65), Expect = 0.58
Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 3/100 (3%)
Frame = +2
Query: 107 ATMKWTVHIEGGPMRVNHAAVCIGDKIYSFGGYCSTE---EYKDWEPIPVHILNTATLRW 277
+T KW+ + G HAA + + GG S + V + A +W
Sbjct: 494 STKKWSNLPQSGVQLYLHAAAYLNGLMVVVGGRGSNVTAGSKSECFSNMVQSYDVACKQW 553
Query: 278 TSVNYKRSDVXPFQRYGHTAVAYGHKVYMWGGRNNAVACD 397
++++ D+ +R+GH+ G K+Y GG N + D
Sbjct: 554 SNMSTAPVDL---KRFGHSVHVIGQKLYALGGFNGKMKSD 590
Score = 27.5 bits (58), Expect = 4.1
Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Frame = +2
Query: 149 RVNHAAVCIGDKIYSFGGYCSTEEYKDWEPIPVH---ILNTATLRWTSVNYKRSDV--XP 313
R +H V +K+Y FGG T+ + I + + +W +K + P
Sbjct: 343 RFDHTVVKYKNKLYMFGGVTKTQVRHQTTQAATNELWIFDMGSKKWAQQIHKNETIIAAP 402
Query: 314 FQRYGHTAVAYGHKVYMWGGRN 379
F GH+A ++++ G N
Sbjct: 403 FAVAGHSAHVIRSEMFVIFGYN 424
>Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical
protein F33C8.1a protein.
Length = 1271
Score = 43.6 bits (98), Expect = 6e-05
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 149 RVNHAAVCIGDKIYSFGGYCSTEEYKDW--EPIPVHILNTATLRWTSVNYKRSDVXPFQR 322
+ +HA++ I D ++S GG E+ D +P + + N + W+ V S P R
Sbjct: 291 KASHASIAIDDVVWSIGG-----EFFDGSSDPNNIDVYNVTSRIWSKVEV--SGDMPKPR 343
Query: 323 YGHTAVAYGHKVYMWGG 373
+ HT V Y +K+YM+GG
Sbjct: 344 FDHTVVKYKNKLYMFGG 360
Score = 30.3 bits (65), Expect = 0.58
Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 3/100 (3%)
Frame = +2
Query: 107 ATMKWTVHIEGGPMRVNHAAVCIGDKIYSFGGYCSTE---EYKDWEPIPVHILNTATLRW 277
+T KW+ + G HAA + + GG S + V + A +W
Sbjct: 494 STKKWSNLPQSGVQLYLHAAAYLNGLMVVVGGRGSNVTAGSKSECFSNMVQSYDVACKQW 553
Query: 278 TSVNYKRSDVXPFQRYGHTAVAYGHKVYMWGGRNNAVACD 397
++++ D+ +R+GH+ G K+Y GG N + D
Sbjct: 554 SNMSTAPVDL---KRFGHSVHVIGQKLYALGGFNGKMKSD 590
Score = 27.5 bits (58), Expect = 4.1
Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Frame = +2
Query: 149 RVNHAAVCIGDKIYSFGGYCSTEEYKDWEPIPVH---ILNTATLRWTSVNYKRSDV--XP 313
R +H V +K+Y FGG T+ + I + + +W +K + P
Sbjct: 343 RFDHTVVKYKNKLYMFGGVTKTQVRHQTTQAATNELWIFDMGSKKWAQQIHKNETIIAAP 402
Query: 314 FQRYGHTAVAYGHKVYMWGGRN 379
F GH+A ++++ G N
Sbjct: 403 FAVAGHSAHVIRSEMFVIFGYN 424
>AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin
protein.
Length = 1329
Score = 43.6 bits (98), Expect = 6e-05
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 149 RVNHAAVCIGDKIYSFGGYCSTEEYKDW--EPIPVHILNTATLRWTSVNYKRSDVXPFQR 322
+ +HA++ I D ++S GG E+ D +P + + N + W+ V S P R
Sbjct: 291 KASHASIAIDDVVWSIGG-----EFFDGSSDPNNIDVYNVTSRIWSKVEV--SGDMPKPR 343
Query: 323 YGHTAVAYGHKVYMWGG 373
+ HT V Y +K+YM+GG
Sbjct: 344 FDHTVVKYKNKLYMFGG 360
Score = 30.3 bits (65), Expect = 0.58
Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 3/100 (3%)
Frame = +2
Query: 107 ATMKWTVHIEGGPMRVNHAAVCIGDKIYSFGGYCSTE---EYKDWEPIPVHILNTATLRW 277
+T KW+ + G HAA + + GG S + V + A +W
Sbjct: 494 STKKWSNLPQSGVQLYLHAAAYLNGLMVVVGGRGSNVTAGSKSECFSNMVQSYDVACKQW 553
Query: 278 TSVNYKRSDVXPFQRYGHTAVAYGHKVYMWGGRNNAVACD 397
++++ D+ +R+GH+ G K+Y GG N + D
Sbjct: 554 SNMSTAPVDL---KRFGHSVHVIGQKLYALGGFNGKMKSD 590
Score = 27.5 bits (58), Expect = 4.1
Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Frame = +2
Query: 149 RVNHAAVCIGDKIYSFGGYCSTEEYKDWEPIPVH---ILNTATLRWTSVNYKRSDV--XP 313
R +H V +K+Y FGG T+ + I + + +W +K + P
Sbjct: 343 RFDHTVVKYKNKLYMFGGVTKTQVRHQTTQAATNELWIFDMGSKKWAQQIHKNETIIAAP 402
Query: 314 FQRYGHTAVAYGHKVYMWGGRN 379
F GH+A ++++ G N
Sbjct: 403 FAVAGHSAHVIRSEMFVIFGYN 424
>AC024801-9|AAF59653.3| 791|Caenorhabditis elegans Hypothetical
protein Y50D7A.1 protein.
Length = 791
Score = 32.7 bits (71), Expect = 0.11
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Frame = +2
Query: 89 FFLNSIATMKWTVHIEGGPMRVNHAAVCIGDKIYSFGGYCSTEEYKDWE-PIPVHILNTA 265
+F S +T ++ P + H+AV GD ++ +GG+ E P+ V L
Sbjct: 231 YFDTSTSTWRYVPATGNSPSSIGHSAVVSGDYMFVYGGWPFIHNELHLETPLRVERLQIL 290
Query: 266 TLR---WTSVNYKR---SDVXPFQRYGHT 334
+R W +V ++ +D PF R+ HT
Sbjct: 291 DIRHETWKTVQLEKWNPADPAPFPRF-HT 318
Score = 27.1 bits (57), Expect = 5.5
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Frame = +2
Query: 107 ATMKWT-VHIEGGPM--RVNHAA-VCIGDKIYSFGGYCSTEEYKDWE-PIPVHILNTATL 271
AT+KW+ V I P + +A+ V G ++ FGG + P +H +T+T
Sbjct: 178 ATLKWSRVIISSAPYPSAMCYASLVTWGTQLILFGGNDNRRRCPFANVPPELHYFDTSTS 237
Query: 272 RWTSVNYKRSDVXPFQRYGHTAVAYGHKVYMWGG 373
W Y + GH+AV G ++++GG
Sbjct: 238 TW---RYVPATGNSPSSIGHSAVVSGDYMFVYGG 268
>U00043-5|AAN65292.1| 505|Caenorhabditis elegans Hypothetical
protein T26A5.5b protein.
Length = 505
Score = 29.5 bits (63), Expect = 1.0
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 77 EATVFFLNSIATMKWTVHIEGGPMRVNHAAV-CIGDKIYSFGGYCSTEEYKDWE 235
E +F++ + +WT P+R+ A +GDK + GG+ EY D+E
Sbjct: 279 EELIFYVIADYVKQWTGREYVRPLRIEDAKYDYVGDKWKTAGGHHKKIEYSDYE 332
>U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical
protein T26A5.5a protein.
Length = 1076
Score = 29.5 bits (63), Expect = 1.0
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 77 EATVFFLNSIATMKWTVHIEGGPMRVNHAAV-CIGDKIYSFGGYCSTEEYKDWE 235
E +F++ + +WT P+R+ A +GDK + GG+ EY D+E
Sbjct: 279 EELIFYVIADYVKQWTGREYVRPLRIEDAKYDYVGDKWKTAGGHHKKIEYSDYE 332
>AF016447-10|AAG24008.1| 314|Caenorhabditis elegans Hypothetical
protein C54F6.3 protein.
Length = 314
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 170 CIGDKIYSFGGYCSTEEYKDWEPIPVHI-LNTATLRW 277
C+ +IY+ G + +K+W+PIP ++ + A L W
Sbjct: 165 CVVKEIYN--GLKKVQNHKEWQPIPTYMDTHAAPLSW 199
>Z70686-2|CAA94610.1| 570|Caenorhabditis elegans Hypothetical
protein R10H10.2 protein.
Length = 570
Score = 28.3 bits (60), Expect = 2.4
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 158 HAAVCIGDKIYSFGGYCSTE-EYKDWEPIPVHILNTATLRWTSVNYKRSDVXPFQRYGHT 334
H + + +Y FGG + W+ L+T T +W N + + P ++
Sbjct: 284 HGSAIVDGILYLFGGSTGQRTRCETWK------LSTETWQWDRCN---NMMEPRNYISNS 334
Query: 335 AVAYGHKVYMWGGRN 379
+V Y ++Y++GG+N
Sbjct: 335 SVVYDGRIYVFGGQN 349
>U20142-2|AAB60235.1| 570|Caenorhabditis elegans SPE-26 protein
protein.
Length = 570
Score = 28.3 bits (60), Expect = 2.4
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 158 HAAVCIGDKIYSFGGYCSTE-EYKDWEPIPVHILNTATLRWTSVNYKRSDVXPFQRYGHT 334
H + + +Y FGG + W+ L+T T +W N + + P ++
Sbjct: 284 HGSAIVDGILYLFGGSTGQRTRCETWK------LSTETWQWDRCN---NMMEPRNYISNS 334
Query: 335 AVAYGHKVYMWGGRN 379
+V Y ++Y++GG+N
Sbjct: 335 SVVYDGRIYVFGGQN 349
>Z81525-7|CAE17780.1| 263|Caenorhabditis elegans Hypothetical
protein F33A8.10 protein.
Length = 263
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 287 LQRSILELLCSIYGLVLAPNLYILQWNNIHQTNRFYRQYIQL 162
L I ++C Y L+PN Q+NN++++ Y Q Q+
Sbjct: 10 LALGIPTIICQSYTFPLSPNQPYPQYNNVYESRYPYLQNQQI 51
>Z93388-1|CAB07658.1| 355|Caenorhabditis elegans Hypothetical
protein T10C6.1 protein.
Length = 355
Score = 26.6 bits (56), Expect = 7.2
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -2
Query: 388 YRIIPAAPHIYLVTIGNCCVPISLKWXYV*SLIVYRGPS*SCCVQYMDWYWLPIFIFFSG 209
+ I P P I+ + G C I L + S+IV+R PS +Y+ Y +FF G
Sbjct: 7 FSIDPWMPIIHRMERGFACFGILLNCILL-SMIVHRSPSEIGVYKYLMMYITIFELFFGG 65
>Z92829-10|CAB07350.2| 319|Caenorhabditis elegans Hypothetical
protein F10A3.15 protein.
Length = 319
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 296 SYSLQRSILELLCSIYGLVL 237
SYS + L +LCS YGLVL
Sbjct: 87 SYSTAQIALAILCSSYGLVL 106
>Z83116-3|CAB05561.1| 284|Caenorhabditis elegans Hypothetical
protein M01B2.3 protein.
Length = 284
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/19 (52%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
Frame = -2
Query: 82 SFKLNCYIIF-IFFKRNLP 29
+F LNCYI+F IF+++ +P
Sbjct: 19 AFFLNCYILFSIFYQKRIP 37
>Z70267-1|CAA94211.1| 307|Caenorhabditis elegans Hypothetical
protein K04C1.1 protein.
Length = 307
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -1
Query: 257 SIYGLVLAPNLYILQWNNIHQTNRFYRQYIQLHD*LSSVP 138
+IYG LAPNL+I+ N + Y++ + L L SVP
Sbjct: 163 AIYGF-LAPNLFIITIFNTVLNIKAYKKLLVLKKTLRSVP 201
>AL117202-22|CAB57900.1| 691|Caenorhabditis elegans Hypothetical
protein Y47D3A.28 protein.
Length = 691
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -3
Query: 129 CTVHFIVAMEFKKKTVASN*TVILFLYFLKGIYHIPDKLV 10
CT+ IV FKKK+ N +I L+ LK P KL+
Sbjct: 165 CTIGVIVEKGFKKKSANGNDFLIWKLHDLKDCQTQPVKLL 204
>Z92829-16|CAE46671.1| 284|Caenorhabditis elegans Hypothetical
protein K05D4.9 protein.
Length = 284
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 296 SYSLQRSILELLCSIYGLVL 237
SYS + L +LCS YGLVL
Sbjct: 53 SYSTAQIALAVLCSSYGLVL 72
>Z92804-6|CAE46675.1| 284|Caenorhabditis elegans Hypothetical
protein K05D4.9 protein.
Length = 284
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 296 SYSLQRSILELLCSIYGLVL 237
SYS + L +LCS YGLVL
Sbjct: 53 SYSTAQIALAVLCSSYGLVL 72
>DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein.
Length = 690
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 320 RYGHTAVAYGHKVYMWGGRNNAVACDTLSCFD 415
R G A G KVY GG + + +T+ C+D
Sbjct: 608 RGGVGVAALGGKVYAIGGHDGSDYLNTVECYD 639
>AL023847-5|CAA19551.1| 247|Caenorhabditis elegans Hypothetical
protein Y57A10C.9 protein.
Length = 247
Score = 26.2 bits (55), Expect = 9.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 82 SFKLNCYIIFIFFKRNLPYP 23
SF N YII+ F+++ +P P
Sbjct: 25 SFIFNAYIIYCFWRKKIPSP 44
>AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical
protein W02G9.2 protein.
Length = 690
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 320 RYGHTAVAYGHKVYMWGGRNNAVACDTLSCFD 415
R G A G KVY GG + + +T+ C+D
Sbjct: 608 RGGVGVAALGGKVYAIGGHDGSDYLNTVECYD 639
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,590,492
Number of Sequences: 27780
Number of extensions: 230568
Number of successful extensions: 607
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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