Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28e16
(514 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 37 0.010
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 37 0.010
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 37 0.010
Z78412-2|CAB01650.1| 169|Caenorhabditis elegans Hypothetical pr... 31 0.48
AY835433-1|AAX37360.1| 331|Caenorhabditis elegans bZIP transcri... 30 0.85
AY835432-1|AAX37359.1| 467|Caenorhabditis elegans bZIP transcri... 30 0.85
AF016440-2|AAB65905.2| 331|Caenorhabditis elegans Abnormal ever... 30 0.85
AF016440-1|ABA54419.1| 467|Caenorhabditis elegans Abnormal ever... 30 0.85
Z68161-9|CAA92298.2| 688|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF039710-7|AAB96687.1| 123|Caenorhabditis elegans Hypothetical ... 29 2.6
Z81534-3|CAB04347.3| 328|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z50872-1|CAA90754.2| 1052|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical pr... 28 3.4
AL137227-7|CAB70235.1| 787|Caenorhabditis elegans Hypothetical ... 28 4.5
AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical ... 28 4.5
Z50874-1|CAA90763.1| 377|Caenorhabditis elegans Hypothetical pr... 27 6.0
AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical ... 27 7.9
AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical ... 27 7.9
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 36.7 bits (81), Expect = 0.010
Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Frame = +2
Query: 110 NAIQVSQEAIDRIQAQLNAKQAEXXXXXXXXXXXXXXXXXRKQQEHAAEEAYWTRRIENL 289
N +Q S E + +L AK +E + +QE + E + +
Sbjct: 522 NELQTSSEKTKKASGELEAKISELEKKLRDAEASRTDKEQKWKQEKESFERKLAEAEDEI 581
Query: 290 KRVHEK---INSGMELEYQKTLEETNELFN-FINNDKNVNKLPPCQEEKEKVLQ 439
KR E+ + ME E QK + T +L + +N++KN+ + E++EK+++
Sbjct: 582 KRKGERFVEMEKEMEEERQKATDRTLKLKDALVNSEKNLETIKKESEDREKIVR 635
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 36.7 bits (81), Expect = 0.010
Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Frame = +2
Query: 110 NAIQVSQEAIDRIQAQLNAKQAEXXXXXXXXXXXXXXXXXRKQQEHAAEEAYWTRRIENL 289
N +Q S E + +L AK +E + +QE + E + +
Sbjct: 524 NELQTSSEKTKKASGELEAKISELEKKLRDAEASRTDKEQKWKQEKESFERKLAEAEDEI 583
Query: 290 KRVHEK---INSGMELEYQKTLEETNELFN-FINNDKNVNKLPPCQEEKEKVLQ 439
KR E+ + ME E QK + T +L + +N++KN+ + E++EK+++
Sbjct: 584 KRKGERFVEMEKEMEEERQKATDRTLKLKDALVNSEKNLETIKKESEDREKIVR 637
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 36.7 bits (81), Expect = 0.010
Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Frame = +2
Query: 110 NAIQVSQEAIDRIQAQLNAKQAEXXXXXXXXXXXXXXXXXRKQQEHAAEEAYWTRRIENL 289
N +Q S E + +L AK +E + +QE + E + +
Sbjct: 524 NELQTSSEKTKKASGELEAKISELEKKLRDAEASRTDKEQKWKQEKESFERKLAEAEDEI 583
Query: 290 KRVHEK---INSGMELEYQKTLEETNELFN-FINNDKNVNKLPPCQEEKEKVLQ 439
KR E+ + ME E QK + T +L + +N++KN+ + E++EK+++
Sbjct: 584 KRKGERFVEMEKEMEEERQKATDRTLKLKDALVNSEKNLETIKKESEDREKIVR 637
>Z78412-2|CAB01650.1| 169|Caenorhabditis elegans Hypothetical
protein M176.3 protein.
Length = 169
Score = 31.1 bits (67), Expect = 0.48
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +2
Query: 314 SGMELEYQK-----TLEETNELFNFINNDKNVNKLPPCQEEKEKVLQCYSTNADXSLLCS 478
SG +LE +K T+E + F F + +NV CQ+ + ++++C N L C+
Sbjct: 95 SGNDLEERKKIFDDTVERVQKQF-FAYHRENV-----CQDNENEIVRCLQENPGRVLKCA 148
Query: 479 VLVNQFNECV 508
L F +CV
Sbjct: 149 PLTEAFEKCV 158
>AY835433-1|AAX37360.1| 331|Caenorhabditis elegans bZIP
transcription factor FOS-1b protein.
Length = 331
Score = 30.3 bits (65), Expect = 0.85
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +2
Query: 230 RKQQEHAAEEAYWTRRIENLKRVHEKINSGMELEYQKTLEETNELFNFINNDKNVNKLPP 409
R+Q+ A RRI+ +K + +++N + K + E N + N +N+ KN +
Sbjct: 33 RRQRNKEAAARCRQRRIDLMKELQDQVND-FKNSNDKKMAECNNIRNKLNSLKNYLETHD 91
Query: 410 CQEEKEK 430
C+ +E+
Sbjct: 92 CKLSREE 98
>AY835432-1|AAX37359.1| 467|Caenorhabditis elegans bZIP
transcription factor FOS-1a protein.
Length = 467
Score = 30.3 bits (65), Expect = 0.85
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +2
Query: 230 RKQQEHAAEEAYWTRRIENLKRVHEKINSGMELEYQKTLEETNELFNFINNDKNVNKLPP 409
R+Q+ A RRI+ +K + +++N + K + E N + N +N+ KN +
Sbjct: 169 RRQRNKEAAARCRQRRIDLMKELQDQVND-FKNSNDKKMAECNNIRNKLNSLKNYLETHD 227
Query: 410 CQEEKEK 430
C+ +E+
Sbjct: 228 CKLSREE 234
>AF016440-2|AAB65905.2| 331|Caenorhabditis elegans Abnormal
eversion of vulva protein5, isoform a protein.
Length = 331
Score = 30.3 bits (65), Expect = 0.85
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +2
Query: 230 RKQQEHAAEEAYWTRRIENLKRVHEKINSGMELEYQKTLEETNELFNFINNDKNVNKLPP 409
R+Q+ A RRI+ +K + +++N + K + E N + N +N+ KN +
Sbjct: 33 RRQRNKEAAARCRQRRIDLMKELQDQVND-FKNSNDKKMAECNNIRNKLNSLKNYLETHD 91
Query: 410 CQEEKEK 430
C+ +E+
Sbjct: 92 CKLSREE 98
>AF016440-1|ABA54419.1| 467|Caenorhabditis elegans Abnormal
eversion of vulva protein5, isoform b protein.
Length = 467
Score = 30.3 bits (65), Expect = 0.85
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +2
Query: 230 RKQQEHAAEEAYWTRRIENLKRVHEKINSGMELEYQKTLEETNELFNFINNDKNVNKLPP 409
R+Q+ A RRI+ +K + +++N + K + E N + N +N+ KN +
Sbjct: 169 RRQRNKEAAARCRQRRIDLMKELQDQVND-FKNSNDKKMAECNNIRNKLNSLKNYLETHD 227
Query: 410 CQEEKEK 430
C+ +E+
Sbjct: 228 CKLSREE 234
>Z68161-9|CAA92298.2| 688|Caenorhabditis elegans Hypothetical
protein F20C5.5 protein.
Length = 688
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/76 (22%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Frame = +2
Query: 254 EEAYWTRRIENLKRVHEKINSGMELEYQK----TLEETNELFNFINNDKNVNKLPPCQEE 421
+E++ + +++++V EK +EL++Q ++++TN + +NND+NV K +
Sbjct: 317 QESFNVYQKDSIEKVMEKF---LELQHQNLTVFSVDDTNSISTELNNDRNVAKNDKSEGV 373
Query: 422 KEKVLQCYSTNADXSL 469
+ +L+ ++ + +L
Sbjct: 374 ESLMLENFNNSLKIAL 389
>AF039710-7|AAB96687.1| 123|Caenorhabditis elegans Hypothetical
protein C46E10.2 protein.
Length = 123
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 169 FRV*LSLYSVYGFLRHLNSIFIIHAKLP 86
F + S Y+++GF L IF+I KLP
Sbjct: 12 FNIYWSFYAIFGFTFQLTLIFLIFQKLP 39
>Z81534-3|CAB04347.3| 328|Caenorhabditis elegans Hypothetical
protein F37H8.4 protein.
Length = 328
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 400 TASMPRRKRKGTSVLQYKCGXVSPLFSVSE 489
T+S+ R+++ VL YK G VSP +VSE
Sbjct: 41 TSSVARQEQCRQIVLDYKNGKVSPTLTVSE 70
>Z50872-1|CAA90754.2| 1052|Caenorhabditis elegans Hypothetical
protein C05D12.2 protein.
Length = 1052
Score = 28.3 bits (60), Expect = 3.4
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Frame = +2
Query: 239 QEHAAEEAYWTRRIENLKRVHEKINSGMELEYQK--TL-----EETNELFNFINNDKNVN 397
++H+ E + + ++ E +NS EY+K TL EE++ LF+ N D V
Sbjct: 544 EQHSGNEQIYKTLTTEMHKILELVNSSTTSEYRKEFTLIVHDSEESHVLFSSYNPDIFVE 603
Query: 398 KLP 406
K P
Sbjct: 604 KFP 606
>Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical protein
B0464.2 protein.
Length = 1150
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +2
Query: 236 QQEHAAEEAYWTRRIENLKRVHEKINSGMELEYQKTLEETNELFNFINNDKNVNKLPPCQ 415
++E E +I ++ E+ + E E QK + N +FI K+V +LP
Sbjct: 873 EEERRLMEKQEKEKIALQNKMIEEARAKEEAEKQKLEDMKNLRLSFIEMTKDVLRLPEIV 932
Query: 416 EEKEK 430
EEK +
Sbjct: 933 EEKRR 937
>AL137227-7|CAB70235.1| 787|Caenorhabditis elegans Hypothetical
protein F58D5.6 protein.
Length = 787
Score = 27.9 bits (59), Expect = 4.5
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +2
Query: 332 YQKTLEETNELFNFINNDKNVNKLPPCQEEKEKVLQCYSTNADXSLLCSVLVNQFNE 502
+ T+E++++L + +K LP C EK K L+ S++ SV VN F+E
Sbjct: 298 FSNTIEQSSKLNKYYEPEKLFTSLPKC-VEKLKALKTQPDFDKLSIIDSV-VNTFHE 352
>AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical
protein Y47D3B.7 protein.
Length = 1113
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 20 RNLPTKI*KFYLILNMGSSQSARKLSVDNENAIQVSQ 130
RN P KI L L +G + ARK+ +D+ ++ +VSQ
Sbjct: 921 RNCPPKILTDNLGLAVGHALCARKICIDDRDSPKVSQ 957
>Z50874-1|CAA90763.1| 377|Caenorhabditis elegans Hypothetical
protein R10E4.1 protein.
Length = 377
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +2
Query: 233 KQQEHAAEEAYWTRRIENLKRVHEKINSGMELEYQKTL-EETNELFNFINNDKNVNK 400
K Q+H E + R+E V + +N GM +Y L EE N L + VNK
Sbjct: 109 KLQDHMVREKLRSMRVEITVNVIKTMNFGMLYDYFDVLPEEENALLKVEDRLIRVNK 165
>AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical
protein Y59A8A.2 protein.
Length = 613
Score = 27.1 bits (57), Expect = 7.9
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Frame = +2
Query: 242 EHAAEEAYWTRRIENLKRVHEKINSGMEL------EYQKTLEETNELFNFINNDKNVNKL 403
E AEEA +R+ + K+NSG + EY + +TNE+F+ I++ +
Sbjct: 375 ETKAEEAGLSRKEFRDPFFNIKLNSGSHVPIGFSKEYIELFTKTNEIFSGISSFMQIRDS 434
Query: 404 PPCQEEKEKV 433
EE+EK+
Sbjct: 435 QIIPEEEEKL 444
>AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical
protein C33E10.6 protein.
Length = 1014
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +2
Query: 254 EEAYWTRRIENLKRVHEKINSGMELEYQKTLEETNELFNFINNDKNVNKLPPCQ 415
+E + IENL + + ++LEY K + + + F F + VN C+
Sbjct: 652 DERELRKYIENLNEIGKGCILEVDLEYPKDIHDLHNDFPFYPQNTKVNNQKTCK 705
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,369,442
Number of Sequences: 27780
Number of extensions: 159490
Number of successful extensions: 559
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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