Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28e08
         (496 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    29   0.036
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    27   0.083
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   1.8  
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    22   3.1  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   5.4  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    21   7.2  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   7.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.5  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   9.5  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 28.7 bits (61), Expect = 0.036
 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +2

Query: 29  RLRRHSQHLSQLSVHEARYRRTKKEIFNET-LHGI 130
           R R+H+ H  QLS  +   RR  +++ N+T LHG+
Sbjct: 103 RERKHAVHKEQLSREQRFLRRRLEQLTNQTGLHGL 137


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 27.5 bits (58), Expect = 0.083
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 153 EPSSGSDAFALKTVAKKEGEHYIISGSKMWISNS 254
           +P    +AFA    A K  E YI SG+K+ ++ S
Sbjct: 528 DPPENGEAFAQNLYAMKMNETYINSGNKISLATS 561


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = +3

Query: 57  VNSLFMKLGTEEQKKKYLTKLCTEYAGSFCLTEPSSGSDAFALKTVAKKEGEHY 218
           V SL M+  TE+ +      L    A    LT PS+   A AL  +  K  E +
Sbjct: 46  VTSLLMREETEDAEDTQTLNLKHLRAAVLVLTNPSNEVVAVALGALLSKGEESF 99


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 435 RAPSHCRNVPCMCPK 391
           +A  HC  V C+C K
Sbjct: 69  KAGGHCEKVGCICRK 83


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = +3

Query: 309 KGITCFIVERET 344
           +G++C +++RET
Sbjct: 310 EGVSCLVIDRET 321


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 464 FAIFSKDTRFVHLHIV 417
           +A+FSKD RF    I+
Sbjct: 62  YALFSKDFRFAFKSII 77


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 464 FAIFSKDTRFVHLHIV 417
           +A+FSKD RF    I+
Sbjct: 510 YALFSKDFRFAFKSII 525


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 304 PLEGSALVITRKTPATSEFEIHILEPL 224
           PLEG+ ++  +       F+ HIL+ L
Sbjct: 871 PLEGNLMINNKYALKFFPFDKHILDKL 897


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 131 CWQFLSHRAQLRIRCFC 181
           CW     RA +RI C C
Sbjct: 392 CWSRDFRRAFVRILCAC 408


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,368
Number of Sequences: 438
Number of extensions: 2556
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)