Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28e07
(471 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1250 + 35726115-35726255,35727435-35727479,35728570-357286... 98 4e-21
10_02_0114 + 5431578-5431724,5432753-5432797,5433572-5433691,543... 83 1e-16
03_02_0381 + 7951360-7951509,7952125-7952169,7952625-7952744,795... 83 1e-16
04_03_0196 - 12533947-12534470,12536577-12537039,12537673-12537903 31 0.62
07_03_0532 + 19171290-19171394,19173122-19173302,19173761-191742... 29 1.4
12_01_1069 - 11060045-11060262,11060404-11060545,11060624-110607... 29 1.9
04_03_0037 - 9991176-9991268,9991403-9991474,9991569-9991928,999... 29 1.9
12_01_0243 + 1816725-1816883,1816992-1817114,1817227-1817313,181... 28 3.3
11_06_0380 + 22937941-22937984,22939375-22941481 28 3.3
03_02_0816 + 11487811-11488708,11488835-11489235 28 3.3
02_04_0361 - 22359278-22359439,22362291-22362728 28 3.3
06_02_0025 + 10719385-10719424,10719885-10720063 28 4.4
04_04_1690 - 35382241-35382553,35382614-35382933,35383601-353851... 28 4.4
03_05_1091 + 30322035-30322739,30322861-30324043,30324114-303251... 28 4.4
09_04_0680 - 19401891-19402049,19402556-19402928,19403385-194034... 27 5.8
08_02_1453 - 27199228-27200579,27200712-27202646,27202905-272029... 27 5.8
08_01_0935 - 9218271-9219860,9219959-9220232,9220506-9221767 27 5.8
06_01_0616 + 4467439-4467733,4469232-4469294,4469840-4471176,447... 27 5.8
06_01_0363 - 2588356-2588532,2588612-2588737,2588811-2588888,258... 27 5.8
03_06_0180 + 32175658-32178145,32178765-32178808 27 5.8
03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,951... 27 5.8
06_02_0342 + 14789190-14789205,14789868-14789891,14789968-147901... 27 7.6
05_06_0225 - 26555217-26555280,26555647-26555713,26555800-265558... 27 7.6
03_02_0563 + 9471025-9471093,9471490-9471601,9471944-9472255,947... 27 7.6
02_05_0880 + 32466538-32467083,32467333-32467644,32467731-324682... 27 7.6
>01_06_1250 +
35726115-35726255,35727435-35727479,35728570-35728692,
35728804-35728911,35729247-35729360,35729440-35729613,
35729881-35729976,35730165-35730272,35730389-35730496,
35730595-35730743,35731255-35731408,35732487-35732647,
35733739-35733945,35733968-35734025,35734058-35734222,
35734305-35734388,35735670-35735863,35735952-35736011,
35736203-35736407
Length = 817
Score = 97.9 bits (233), Expect = 4e-21
Identities = 52/117 (44%), Positives = 76/117 (64%)
Frame = +3
Query: 117 RSEEMALCQLFIQPEAAYTSVSELGEAGSVQFRDLNPDVNAFQRKFVNEVRRCDEMERKL 296
RSE+M QL I E+A +V+ LGE G +QF+DLN D + FQR FVN+V+RC EM RKL
Sbjct: 14 RSEKMCFVQLIIPAESARLAVTYLGELGLLQFKDLNEDKSPFQRIFVNQVKRCSEMSRKL 73
Query: 297 RYIEAEVHKDGVHIPAVKEAPRAPNPREIIDLEAHLEKTENEILELSHNAVNLKQNY 467
R+ +++K GV +V+ P ++ +LEA L + EN++LE++ N+ L Q Y
Sbjct: 74 RFFNDQINKAGVK-SSVR--PAMQPDIDLEELEAKLREHENDLLEMNTNSEKLLQTY 127
>10_02_0114 +
5431578-5431724,5432753-5432797,5433572-5433691,
5433773-5433880,5434900-5435073,5435366-5435503,
5435879-5435986,5436131-5436238,5436340-5436488,
5437594-5437747,5437980-5438140,5438221-5438427,
5438575-5438758,5438846-5438929,5439023-5439222,
5439314-5439373,5439461-5439665
Length = 783
Score = 83.0 bits (196), Expect = 1e-16
Identities = 44/119 (36%), Positives = 69/119 (57%)
Frame = +3
Query: 111 MFRSEEMALCQLFIQPEAAYTSVSELGEAGSVQFRDLNPDVNAFQRKFVNEVRRCDEMER 290
+ RSE M L Q+ I E+A+ +VS LG+ G +QF+DLN D + FQR + ++++RC EM R
Sbjct: 14 LMRSEAMQLVQVIIPAESAHLAVSYLGDLGLLQFKDLNADKSPFQRTYASQIKRCGEMAR 73
Query: 291 KLRYIEAEVHKDGVHIPAVKEAPRAPNPREIIDLEAHLEKTENEILELSHNAVNLKQNY 467
KLR+ ++ K + + EI DLE L + E E+ E++ N L++ Y
Sbjct: 74 KLRFFREQMSKAAI----ATSTQFSGTSLEIDDLEVKLGELEVELTEVNANNDKLQRTY 128
>03_02_0381 +
7951360-7951509,7952125-7952169,7952625-7952744,
7952823-7952930,7953256-7953363,7953635-7953808,
7954054-7954191,7954643-7954750,7954866-7954973,
7955086-7955234,7955816-7955969,7956143-7956303,
7956391-7956597,7956703-7956886,7956974-7957057,
7957146-7957345,7957476-7957535,7957631-7957835
Length = 820
Score = 83.0 bits (196), Expect = 1e-16
Identities = 45/119 (37%), Positives = 68/119 (57%)
Frame = +3
Query: 111 MFRSEEMALCQLFIQPEAAYTSVSELGEAGSVQFRDLNPDVNAFQRKFVNEVRRCDEMER 290
+ RSE M L Q+ I E+A+ +VS LGE G +Q +DLN D + FQR + +++RC EM R
Sbjct: 15 LMRSEAMQLVQVIIPTESAHLTVSYLGELGLLQLKDLNADKSPFQRTYAAQIKRCGEMAR 74
Query: 291 KLRYIEAEVHKDGVHIPAVKEAPRAPNPREIIDLEAHLEKTENEILELSHNAVNLKQNY 467
KLR+ + ++ K G+ A + DLE L + E E+ E++ N LK+ Y
Sbjct: 75 KLRFFKEQMSKAGIS----TSAQLTEISLDFDDLEIKLGELEAELAEVNANNEKLKRTY 129
>04_03_0196 - 12533947-12534470,12536577-12537039,12537673-12537903
Length = 405
Score = 30.7 bits (66), Expect = 0.62
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 275 R*NGTQTPVHRG*GAQRWR---PHSRRQGSPPSSKPEG 379
R +GT+ PVHRG G + W P RR GS S + +G
Sbjct: 265 RVSGTKRPVHRGLGPRGWSTAGPRDRRSGS-ASGRSDG 301
>07_03_0532 +
19171290-19171394,19173122-19173302,19173761-19174245,
19174877-19176283,19176413-19176628
Length = 797
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 234 NAFQRKFVNEVRRCDEMERKLRYIEAEVHKD 326
N F +F + +E+ RK+R +E E+HK+
Sbjct: 657 NKFASRFELKEAEVEELRRKIRLLEEEIHKE 687
>12_01_1069 -
11060045-11060262,11060404-11060545,11060624-11060776,
11060942-11061013,11062774-11063082,11063323-11063378,
11066436-11066533,11066616-11066700,11066800-11067001,
11067471-11067542,11069555-11069624,11071829-11072038,
11072337-11072609,11073912-11074183,11075354-11075557
Length = 811
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3
Query: 340 GMWTPSLCTSASMYRSLRS 284
G WTP+ TSA YR+LRS
Sbjct: 766 GTWTPNASTSAWSYRALRS 784
>04_03_0037 - 9991176-9991268,9991403-9991474,9991569-9991928,
9992466-9992555,9992692-9992782,9993530-9993729,
9998024-9998101,9998196-9998312,10000017-10000112,
10000192-10000317,10000533-10000629,10000979-10001023,
10002106-10002179,10002267-10002350,10002439-10002522,
10002660-10002851,10003775-10003903,10004061-10004093,
10004190-10004286,10004833-10004883,10005211-10005289,
10005480-10005552,10005595-10005691,10006392-10006473,
10008345-10008691,10010271-10010535,10010624-10010743,
10010971-10011358
Length = 1219
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 40 QQHSVHSEKIKRKRGPRNHTGWGL-CSGA 123
++ +H +KI RK PRN WG+ SGA
Sbjct: 1181 EEQDLHKQKIPRKTYPRNSPFWGVRVSGA 1209
>12_01_0243 +
1816725-1816883,1816992-1817114,1817227-1817313,
1817442-1817546,1817744-1817905,1818473-1818508,
1818637-1818708,1819285-1819562,1820275-1820509
Length = 418
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 246 RKFVNEVRRCDEMERKLRYIEAEVHKDGVHIPAVK 350
RK V+ +RRCDEM KL + KD V +K
Sbjct: 57 RKGVDLLRRCDEMVSKLGLFSSNETKDDVSTANLK 91
>11_06_0380 + 22937941-22937984,22939375-22941481
Length = 716
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -3
Query: 301 YRSLRSISSQRRTSLTNFLWKAFTSGFKSLNCTLPASPSS 182
YRS+ SISSQ + S+ + L +A SL+ + SPS+
Sbjct: 221 YRSMVSISSQDKVSIESILKEASMEFQASLDFFMDVSPSN 260
>03_02_0816 + 11487811-11488708,11488835-11489235
Length = 432
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 243 QRKFVNEVRRCDEMERKLRYIEAEVHKDGVHIPAVKEAPRAP 368
+RK + + +CDE + LR I A V + A +AP P
Sbjct: 168 RRKLLGALEKCDEDLKTLRRIIAAVRAAEMRAAAASDAPPTP 209
>02_04_0361 - 22359278-22359439,22362291-22362728
Length = 199
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 276 DEMERKLRYIEAEVHKDGVH-IPAVKEAPRAPNPREIIDLEAHLEKTENEILE 431
+E+E++ RY+ + + + +H PA+ P P P L+ +E + E
Sbjct: 6 EELEQRSRYLSSLIRRTKLHAAPALAPPPPTPPPEPETKLQLEMEPQPERVEE 58
>06_02_0025 + 10719385-10719424,10719885-10720063
Length = 72
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 37 RQQHSVHSEKIKRKRGPRNH 96
+QQ +HS+KI+ +R PR H
Sbjct: 30 KQQRRLHSDKIRLQRQPRQH 49
>04_04_1690 - 35382241-35382553,35382614-35382933,35383601-35385164,
35385254-35385372,35385701-35385811,35386068-35386595,
35386702-35386881,35386957-35387556,35387646-35388066,
35388183-35388280,35388372-35389260,35389366-35389544,
35389647-35389763,35389862-35389952,35390578-35390753
Length = 1901
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 338 SRRQGSPPSSKPEGNH*LGGTFRENRKRNSRAVT 439
S + S + +P +GG F ENR RN+ T
Sbjct: 937 SNKSSSTGNQQPAATQAVGGAFSENRDRNAEKCT 970
>03_05_1091 + 30322035-30322739,30322861-30324043,30324114-30325105,
30326409-30326798,30326896-30330060
Length = 2144
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +3
Query: 330 VHIPAVKEAPRAPNPREIIDLEAHLEKTENEILELSHNAVNLKQN 464
V IP VKE+ P+ + + L+A++ + E E L LS + V ++QN
Sbjct: 1048 VPIP-VKESLDEPSAKINVLLQAYISRLELEGLSLSSDMVYIRQN 1091
>09_04_0680 -
19401891-19402049,19402556-19402928,19403385-19403421,
19403587-19403667,19405215-19405280,19407453-19407948,
19408050-19408283,19408473-19408772,19409241-19409423,
19410412-19410414
Length = 643
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 GGFLDGGNVDAIFVHLSLDV-PEFAFHFIATAHLVNEFP 246
G F+ G +V ++F+ + L + P F HL+N+FP
Sbjct: 7 GRFIFGPDVRSLFLTIFLILAPVLVFCIFVARHLINDFP 45
>08_02_1453 -
27199228-27200579,27200712-27202646,27202905-27202966,
27203525-27203545,27204305-27204344,27204345-27204792,
27204866-27204964,27205071-27205394,27205446-27205574,
27205657-27205875,27205976-27206194,27206436-27206669,
27206773-27206943,27207466-27207577,27207955-27208010,
27208083-27208181,27208901-27209134,27209258-27209311,
27209363-27209422
Length = 1955
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 351 EAPRAPNPREIIDLEAHLEKTENEILEL 434
EA RA + ++I DL+ HL + E+++L L
Sbjct: 175 EAERAQHLKQIHDLQEHLREKESQMLAL 202
>08_01_0935 - 9218271-9219860,9219959-9220232,9220506-9221767
Length = 1041
Score = 27.5 bits (58), Expect = 5.8
Identities = 23/90 (25%), Positives = 36/90 (40%)
Frame = +3
Query: 120 SEEMALCQLFIQPEAAYTSVSELGEAGSVQFRDLNPDVNAFQRKFVNEVRRCDEMERKLR 299
S E L +L + S E + G + L+ D N + + + R DE+ERK R
Sbjct: 473 SYERELAKLEAEQTDKPASRPEAAKPGLPHWLQLSNDQNKAKEQELKLKRSKDELERKWR 532
Query: 300 YIEAEVHKDGVHIPAVKEAPRAPNPREIID 389
A +H PA+ PR ++
Sbjct: 533 ETCARIHSACPMAPALSVPLATFTPRPPVE 562
>06_01_0616 +
4467439-4467733,4469232-4469294,4469840-4471176,
4472719-4473086,4473526-4473559,4473978-4474421
Length = 846
Score = 27.5 bits (58), Expect = 5.8
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = -3
Query: 376 LGFGARGASLTAGMWTPSLCTSASMYRSLRSISSQRRTSLTNFLWKAFTS 227
+G GAR T G WTP L S M R R S L LW T+
Sbjct: 434 IGSGAR----TVGFWTPELGVSQDMAR--RRPKSGSNEELKQILWPGETA 477
>06_01_0363 -
2588356-2588532,2588612-2588737,2588811-2588888,
2589584-2589715,2590768-2590878,2590964-2591191
Length = 283
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +3
Query: 270 RCDEMERKLRYIEAEVHKDGVHIPAVKEAPRAPNPREIIDLEAHLEKTE 416
RC ER R I A+V K +PA K+ P EI + +L+K E
Sbjct: 49 RCQVCERIAREISAQVAKKQQALPATKKVPEI-EIIEIAENVCNLKKQE 96
>03_06_0180 + 32175658-32178145,32178765-32178808
Length = 843
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -3
Query: 457 FKLTALCDS-SRISFSVFSKCASKSMISLGFGARGASLTAGM 335
F TA S R +V C S S +SLG G ++TAG+
Sbjct: 29 FSTTAAAASPDRRLLAVLRGCVSPSHLSLGLQVHGRAVTAGL 70
>03_02_0568 +
9514715-9514944,9515174-9515300,9515529-9515684,
9515765-9516102,9516191-9516329,9517083-9517152,
9517201-9517307,9517387-9517437,9517549-9517660,
9517783-9517869,9517958-9518133,9518479-9518586,
9518654-9518812,9518888-9518971,9519053-9519258,
9519565-9519666,9519768-9519877,9519963-9520114,
9520380-9520548,9520841-9520878,9521963-9522571,
9523314-9523784,9523786-9523871,9524396-9524906,
9525388-9525412,9526001-9526051,9526228-9526301,
9526412-9526534,9526667-9526738,9526924-9527020,
9527174-9527283
Length = 1649
Score = 27.5 bits (58), Expect = 5.8
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +3
Query: 291 KLRYIEAEVHKDGVHIPAVKEAPRAPNPREIIDLEAHLEKTENEILELSHNAVNLKQNYL 470
KL ++A K+G++IP + A + + D +LE T+N+ EL N + K+ YL
Sbjct: 361 KLSDVKAAREKNGIYIPQERFALEEAEKKTMRDKIEYLE-TQNK--ELKMNIESCKKEYL 417
>06_02_0342 +
14789190-14789205,14789868-14789891,14789968-14790128,
14790218-14790335,14790658-14790735,14790819-14790938,
14791380-14791430,14791576-14791883
Length = 291
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 74 VNGVLEIIQDGGYVPERGDGFVP 142
V G ++++Q G Y PE GF P
Sbjct: 180 VQGYMDLLQQGSYCPELMSGFRP 202
>05_06_0225 -
26555217-26555280,26555647-26555713,26555800-26555871,
26557058-26557109,26557250-26557302,26557476-26557535,
26557718-26558075
Length = 241
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 360 RAPNPREIIDLEAHLEKTENEILELSHNAVNLKQN 464
+AP P E+ +LEA E+ + I E + NLK +
Sbjct: 152 KAPTPEELAELEARRERVKQNI-EWKFESPNLKSS 185
>03_02_0563 +
9471025-9471093,9471490-9471601,9471944-9472255,
9472341-9472783
Length = 311
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +3
Query: 333 HIPAVKEAPRAPNPREIIDLEAHLEKTENEILELSHNAVNLKQNYL 470
H+P +E PR +E+ + HL + ++E S + +K L
Sbjct: 190 HLPEFREGPRPSGKKEVFN---HLHSSLRNVIERSFGVLKMKWRIL 232
>02_05_0880 +
32466538-32467083,32467333-32467644,32467731-32468201,
32468481-32469246,32469332-32469774
Length = 845
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +3
Query: 333 HIPAVKEAPRAPNPREIIDLEAHLEKTENEILELSHNAVNLKQNYL 470
H+P +E PR +E+ + HL + ++E S + +K L
Sbjct: 724 HLPEFREGPRPSGKKEVFN---HLHSSLRNVIERSFGVLKMKWRIL 766
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,167,555
Number of Sequences: 37544
Number of extensions: 330674
Number of successful extensions: 1027
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1026
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 955200320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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