BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28e07
(471 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 22 3.8
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 22 3.8
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 5.0
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 6.7
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 6.7
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 8.8
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 8.8
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 8.8
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 8.8
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 8.8
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 8.8
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 8.8
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 8.8
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 8.8
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 8.8
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 21.8 bits (44), Expect = 3.8
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 53 FIARK*NVNGVLEIIQ-DGGYVPERGDGFVPTLHSARGGLYLRL 181
F + N+ VL +Q +VPE + LH+ G Y+++
Sbjct: 254 FSGHESNIASVLHALQLYYPHVPEYSSSIIMELHNIEGTHYVKI 297
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 21.8 bits (44), Expect = 3.8
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 53 FIARK*NVNGVLEIIQ-DGGYVPERGDGFVPTLHSARGGLYLRL 181
F + N+ VL +Q +VPE + LH+ G Y+++
Sbjct: 269 FSGHESNIASVLHALQLYYPHVPEYSSSIIMELHNIEGTHYVKI 312
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.4 bits (43), Expect = 5.0
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = -2
Query: 119 PEHSPHPV*FLGPRLRFIFSL*TLC 45
P H PHP GP++ I C
Sbjct: 463 PHHHPHPPETPGPQVETILQNACFC 487
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.0 bits (42), Expect = 6.7
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = +2
Query: 158 RGGLYLRLRA 187
+GG+YLRL+A
Sbjct: 482 KGGMYLRLKA 491
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.0 bits (42), Expect = 6.7
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = +2
Query: 158 RGGLYLRLRA 187
+GG+YLRL+A
Sbjct: 482 KGGMYLRLKA 491
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 8.8
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2
Query: 404 RENRKRNSRA 433
R NRKRNSR+
Sbjct: 32 RTNRKRNSRS 41
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 8.8
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2
Query: 404 RENRKRNSRA 433
R NRKRNSR+
Sbjct: 32 RTNRKRNSRS 41
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 8.8
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +1
Query: 46 HSVHSEKIKRKRGPRNHTG 102
HS H E+ ++ R + TG
Sbjct: 8 HSHHDERFRQSRSEDSETG 26
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 8.8
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +1
Query: 46 HSVHSEKIKRKRGPRNHTG 102
HS H E+ ++ R + TG
Sbjct: 8 HSHHDERFRQSRSEDSETG 26
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 8.8
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +1
Query: 46 HSVHSEKIKRKRGPRNHTG 102
HS H E+ ++ R + TG
Sbjct: 8 HSHHDERFRQSRSEDSETG 26
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 8.8
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +1
Query: 46 HSVHSEKIKRKRGPRNHTG 102
HS H E+ ++ R + TG
Sbjct: 8 HSHHDERFRQSRSEDSETG 26
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 8.8
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +1
Query: 46 HSVHSEKIKRKRGPRNHTG 102
HS H E+ ++ R + TG
Sbjct: 8 HSHHDERFRQSRSEDSETG 26
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 8.8
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +1
Query: 46 HSVHSEKIKRKRGPRNHTG 102
HS H E+ ++ R + TG
Sbjct: 8 HSHHDERFRQSRSEDSETG 26
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 20.6 bits (41), Expect = 8.8
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +1
Query: 46 HSVHSEKIKRKRGPRNHTG 102
HS H E+ ++ R + TG
Sbjct: 8 HSHHDERFRQSRSEDSETG 26
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 20.6 bits (41), Expect = 8.8
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +1
Query: 46 HSVHSEKIKRKRGPRNHTG 102
HS H E+ ++ R + TG
Sbjct: 8 HSHHDERFRQSRSEDSETG 26
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,393
Number of Sequences: 438
Number of extensions: 2752
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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