Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28e06
(473 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22181-7|CAA80189.2| 62|Caenorhabditis elegans Hypothetical pr... 32 0.18
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p... 30 0.98
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr... 30 0.98
U88308-3|AAB42329.2| 430|Caenorhabditis elegans Resistance to i... 27 5.2
U43375-7|AAA83624.1| 271|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z74475-3|CAA98957.2| 567|Caenorhabditis elegans Hypothetical pr... 27 9.1
U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-li... 27 9.1
>Z22181-7|CAA80189.2| 62|Caenorhabditis elegans Hypothetical
protein ZK632.9 protein.
Length = 62
Score = 32.3 bits (70), Expect = 0.18
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 172 GGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKK 285
G +RTK + EH + P G +RK+V N E +K
Sbjct: 23 GSGKRTKSDRVEHKHASQPGGDTRKVVQTASNGEAKRK 60
>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 29.9 bits (64), Expect = 0.98
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +1
Query: 103 SEAFFD-EYDYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHN 279
S+ F D + D + H+ + G+ KKE+ + T+ +PS T+ N E +
Sbjct: 139 SDCFSDKDLDAVSASSSSHLISEEDGEVGEKKESEQPTDMVEPSSAPTTEETETENEEED 198
Query: 280 KKTSNTKH*MD 312
K K +D
Sbjct: 199 DKEKTDKEKLD 209
>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 29.9 bits (64), Expect = 0.98
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +1
Query: 103 SEAFFD-EYDYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHN 279
S+ F D + D + H+ + G+ KKE+ + T+ +PS T+ N E +
Sbjct: 139 SDCFSDKDLDAVSASSSSHLISEEDGEVGEKKESEQPTDMVEPSSAPTTEETETENEEED 198
Query: 280 KKTSNTKH*MD 312
K K +D
Sbjct: 199 DKEKTDKEKLD 209
>U88308-3|AAB42329.2| 430|Caenorhabditis elegans Resistance to
inhibitors of cholinesteraseprotein 19 protein.
Length = 430
Score = 27.5 bits (58), Expect = 5.2
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = +1
Query: 124 YDYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAE 273
Y+ Y+F+ H+ TG ++ K E E P G+ ++ L E
Sbjct: 265 YNNYDFEILSHLATGTKPERERKSEKEESAKTSQPRGNEEELKNLLFGRE 314
>U43375-7|AAA83624.1| 271|Caenorhabditis elegans Hypothetical
protein K09C4.4 protein.
Length = 271
Score = 27.1 bits (57), Expect = 6.9
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -1
Query: 287 VFLLCSAFMSFVTIFLEC--PDGSKWLVCSD 201
VF L + SF+ + C P+ KWLVC +
Sbjct: 146 VFPLAALISSFLVLIWVCRLPESPKWLVCQN 176
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +3
Query: 186 HQERSV*THQPLRSVRAFEKDRHETHERRAQQEDFKHQ 299
HQ + HQ + + E+ +HE ++ QQ+D + Q
Sbjct: 644 HQAQQAQQHQQQQERQQQERQQHERQQQERQQQDRQQQ 681
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +3
Query: 186 HQERSV*THQPLRSVRAFEKDRHETHERRAQQEDFKHQ 299
HQ + HQ + + E+ +HE ++ QQ+D + Q
Sbjct: 644 HQAQQAQQHQQQQERQQQERQQHERQQQERQQQDRQQQ 681
>Z74475-3|CAA98957.2| 567|Caenorhabditis elegans Hypothetical
protein R04F11.4 protein.
Length = 567
Score = 26.6 bits (56), Expect = 9.1
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +1
Query: 127 DYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPSGHSRKI 249
D FD+ I G G + + E FDPS H +++
Sbjct: 298 DAGTFDNISEINDGSEGGENENEGEEEEQIQFDPSNHEKRV 338
>U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-like
protein protein16 protein.
Length = 326
Score = 26.6 bits (56), Expect = 9.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 148 DKHIFTGHGGKQRTKKEASEHTNHFDPSGHSRKIVTK 258
++ + HG R K+ SEH H DP H+ K T+
Sbjct: 78 EEEVEISHGMHHREKRH-SEHLPHPDPPSHTAKRSTE 113
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,752,265
Number of Sequences: 27780
Number of extensions: 206757
Number of successful extensions: 657
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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