Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28e03
         (568 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022831-1|AAY55247.1|  665|Drosophila melanogaster IP13359p pro...    29   3.3  
AE013599-2587|AAM68477.1|  750|Drosophila melanogaster CG30325-P...    29   3.3  
U11691-1|AAA19905.1|  796|Drosophila melanogaster E239.9-1 protein.    28   7.7  
AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein.       28   7.7  

>BT022831-1|AAY55247.1|  665|Drosophila melanogaster IP13359p
           protein.
          Length = 665

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = -1

Query: 553 SKALEEFEIKINSRYVSDTLMYYKQLGSTKNLLYYRQAGLTTLNIKQLMKK 401
           +K   E E + NS  V+DT   YK    T  + + R   + +++ KQ  +K
Sbjct: 131 NKLKAESESRKNSTQVADTFKTYKNPSKTSKIQHLRTGSIKSVHSKQSSRK 181


>AE013599-2587|AAM68477.1|  750|Drosophila melanogaster CG30325-PA
           protein.
          Length = 750

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = -1

Query: 553 SKALEEFEIKINSRYVSDTLMYYKQLGSTKNLLYYRQAGLTTLNIKQLMKK 401
           +K   E E + NS  V+DT   YK    T  + + R   + +++ KQ  +K
Sbjct: 216 NKLKAESESRKNSTQVADTFKTYKNPSKTSKIQHLRTGSIKSVHSKQSSRK 266


>U11691-1|AAA19905.1|  796|Drosophila melanogaster E239.9-1 protein.
          Length = 796

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +3

Query: 321 MVNNNILKKISDSIKH**LCRKP*CIIFFINCLMFKVVNPA 443
           M+NNN  K  SD+  +   C+ P    + I C  FK++NPA
Sbjct: 339 MINNNKNKNYSDNCAY---CKLPGH--YLIQCHKFKIMNPA 374


>AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein.
          Length = 2360

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +3

Query: 321 MVNNNILKKISDSIKH**LCRKP*CIIFFINCLMFKVVNPA 443
           M+NNN  K  SD+  +   C+ P    + I C  FK++NPA
Sbjct: 418 MINNNKNKNYSDNCAY---CKLPGH--YLIQCHKFKIMNPA 453


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,810,180
Number of Sequences: 53049
Number of extensions: 315744
Number of successful extensions: 389
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 389
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)