Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28e02
         (592 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    25   0.36 
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    22   3.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.5  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.5  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   7.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   7.8  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.8  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 512 KIYMLCTTAGSIKPSSLQMLFTR 444
           KIY LC     + PS+L +++ R
Sbjct: 29  KIYALCVVTALVTPSALSIIYYR 51


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +1

Query: 109 HDSIKSQLITDGYAILEDFLH-VAECDEIKAAGLEFTENLPDIEERATFSTTEK 267
           +D+I  + +     +L+ ++  + E       GLE  +N+PD  E      +EK
Sbjct: 30  YDNIDLENVVKNERLLKSYVDCLLEKGRCSPDGLELKKNMPDAIETDCSKCSEK 83


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 395 THCISYIRFSDVTRIVNA*RAFAKSLA 475
           TH +SYI  +   +IVN    F ++ A
Sbjct: 379 THILSYINKASFKKIVNTVATFDETWA 405


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +3

Query: 336 HRRRWKSYSRTGDFI 380
           H   WKSY RT  FI
Sbjct: 120 HMLIWKSYKRTQIFI 134


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = +1

Query: 298 SNDKIRCFFEEGAIDADGNLTVEPE-ISLNKVGH 396
           ++DKI C++     +  GN    PE I  N   H
Sbjct: 19  ASDKIICYYASWGANRPGNGKFTPEDIDANLCTH 52


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 523 GIGSEVVPHQDATYLY 570
           G+G  VVP  DAT  Y
Sbjct: 462 GLGRAVVPTLDATSYY 477


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 192 DFITFRNMKKI 160
           DF TFRN KK+
Sbjct: 288 DFDTFRNTKKL 298


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,304
Number of Sequences: 336
Number of extensions: 2813
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)