BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28e02
(592 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-1163|AAF54534.2| 287|Drosophila melanogaster CG14688-P... 160 1e-39
AY069073-1|AAL39218.1| 324|Drosophila melanogaster GH09096p pro... 30 2.7
AE014296-1835|AAF50143.2| 324|Drosophila melanogaster CG32066-P... 30 2.7
AE014296-1834|AAF50146.2| 324|Drosophila melanogaster CG32066-P... 30 2.7
AY118659-1|AAM50028.1| 1571|Drosophila melanogaster SD09178p pro... 29 3.6
AE014297-2578|AAF55592.1| 1612|Drosophila melanogaster CG7717-PA... 29 3.6
AE014297-2577|AAN13787.1| 1571|Drosophila melanogaster CG7717-PB... 29 3.6
AB069962-1|BAB62892.1| 1497|Drosophila melanogaster mekk1b protein. 29 3.6
AB069961-1|BAB62891.1| 1571|Drosophila melanogaster mekk1a protein. 29 3.6
AE013599-661|AAF59082.2| 1226|Drosophila melanogaster CG30361-PB... 29 4.7
BT022974-1|AAY55390.1| 211|Drosophila melanogaster IP08436p pro... 29 6.2
AY071627-1|AAL49249.1| 511|Drosophila melanogaster RE67487p pro... 29 6.2
AE014296-2906|AAO41239.1| 211|Drosophila melanogaster CG33051-P... 29 6.2
AE013599-3196|AAF46721.1| 511|Drosophila melanogaster CG9841-PA... 29 6.2
>AE014297-1163|AAF54534.2| 287|Drosophila melanogaster CG14688-PA
protein.
Length = 287
Score = 160 bits (389), Expect = 1e-39
Identities = 77/161 (47%), Positives = 103/161 (63%), Gaps = 2/161 (1%)
Frame = +1
Query: 115 SIKSQLITDGYAILEDFLHVAECDEIKAAGLEFTENLPDIEERATFSTT--EKTHLKDKY 288
S+ L +GY ++EDFL E D + AG + P R FST E K+ Y
Sbjct: 3 SVNRSLNENGYIVIEDFLTAEEVDSLYQAGRALCLDAPQ-NNRKIFSTIKQEDAQGKELY 61
Query: 289 FLESNDKIRCFFEEGAIDADGNLTVEPEISLNKVGHALHLLHPIFRCYTYSERVKSICKE 468
F+ES DK+R FFE+GA+ +G L V+P I+LNKVGHALH+ HP F T+S RV+ IC +
Sbjct: 62 FMESGDKVRYFFEKGAVGDEGQLLVDPMIALNKVGHALHVEHPAFNAITFSNRVREICWQ 121
Query: 469 LGFIEPAVVQSMYIFKNPGIGSEVVPHQDATYLYXEPTPPV 591
L + +PAV QSMYI+KNPG+G EV PHQD+ +L+ +P V
Sbjct: 122 LNYNKPAVCQSMYIYKNPGVGGEVTPHQDSWFLHTDPNSAV 162
>AY069073-1|AAL39218.1| 324|Drosophila melanogaster GH09096p
protein.
Length = 324
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/89 (23%), Positives = 38/89 (42%)
Frame = +1
Query: 205 LEFTENLPDIEERATFSTTEKTHLKDKYFLESNDKIRCFFEEGAIDADGNLTVEPEISLN 384
L+F P ERA + E+ + + L D+I+ + G + PE++
Sbjct: 25 LDFENAAPTETERAVYDEVERVLRESEVVL---DEIQIYRGAGKEIREAIADPSPEVTAK 81
Query: 385 KVGHALHLLHPIFRCYTYSERVKSICKEL 471
L L++ + RCY +S + I +L
Sbjct: 82 AWAAVLPLVNKLKRCYEHSMELDKIVPKL 110
>AE014296-1835|AAF50143.2| 324|Drosophila melanogaster CG32066-PC,
isoform C protein.
Length = 324
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/89 (23%), Positives = 38/89 (42%)
Frame = +1
Query: 205 LEFTENLPDIEERATFSTTEKTHLKDKYFLESNDKIRCFFEEGAIDADGNLTVEPEISLN 384
L+F P ERA + E+ + + L D+I+ + G + PE++
Sbjct: 25 LDFENAAPTETERAVYDEVERVLRESEVVL---DEIQIYRGAGKEIREAIADPSPEVTAK 81
Query: 385 KVGHALHLLHPIFRCYTYSERVKSICKEL 471
L L++ + RCY +S + I +L
Sbjct: 82 AWAAVLPLVNKLKRCYEHSMELDKIVPKL 110
>AE014296-1834|AAF50146.2| 324|Drosophila melanogaster CG32066-PB,
isoform B protein.
Length = 324
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/89 (23%), Positives = 38/89 (42%)
Frame = +1
Query: 205 LEFTENLPDIEERATFSTTEKTHLKDKYFLESNDKIRCFFEEGAIDADGNLTVEPEISLN 384
L+F P ERA + E+ + + L D+I+ + G + PE++
Sbjct: 25 LDFENAAPTETERAVYDEVERVLRESEVVL---DEIQIYRGAGKEIREAIADPSPEVTAK 81
Query: 385 KVGHALHLLHPIFRCYTYSERVKSICKEL 471
L L++ + RCY +S + I +L
Sbjct: 82 AWAAVLPLVNKLKRCYEHSMELDKIVPKL 110
>AY118659-1|AAM50028.1| 1571|Drosophila melanogaster SD09178p
protein.
Length = 1571
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 340 DADGNLT-VEPEISLNKVGHALHLLHPIFRCYTYSERVKSIC 462
+ +G LT +E +L A+ LHPI++ ++ R+KS+C
Sbjct: 435 EVEGMLTRLEAAEALYPSSQAMGALHPIYKSQSFVGRIKSMC 476
>AE014297-2578|AAF55592.1| 1612|Drosophila melanogaster CG7717-PA,
isoform A protein.
Length = 1612
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 340 DADGNLT-VEPEISLNKVGHALHLLHPIFRCYTYSERVKSIC 462
+ +G LT +E +L A+ LHPI++ ++ R+KS+C
Sbjct: 476 EVEGMLTRLEAAEALYPSSQAMGALHPIYKSQSFVGRIKSMC 517
>AE014297-2577|AAN13787.1| 1571|Drosophila melanogaster CG7717-PB,
isoform B protein.
Length = 1571
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 340 DADGNLT-VEPEISLNKVGHALHLLHPIFRCYTYSERVKSIC 462
+ +G LT +E +L A+ LHPI++ ++ R+KS+C
Sbjct: 435 EVEGMLTRLEAAEALYPSSQAMGALHPIYKSQSFVGRIKSMC 476
>AB069962-1|BAB62892.1| 1497|Drosophila melanogaster mekk1b protein.
Length = 1497
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 340 DADGNLT-VEPEISLNKVGHALHLLHPIFRCYTYSERVKSIC 462
+ +G LT +E +L A+ LHPI++ ++ R+KS+C
Sbjct: 361 EVEGMLTRLEAAEALYPSSQAMGALHPIYKSQSFVGRIKSMC 402
>AB069961-1|BAB62891.1| 1571|Drosophila melanogaster mekk1a protein.
Length = 1571
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 340 DADGNLT-VEPEISLNKVGHALHLLHPIFRCYTYSERVKSIC 462
+ +G LT +E +L A+ LHPI++ ++ R+KS+C
Sbjct: 435 EVEGMLTRLEAAEALYPSSQAMGALHPIYKSQSFVGRIKSMC 476
>AE013599-661|AAF59082.2| 1226|Drosophila melanogaster CG30361-PB,
isoform B protein.
Length = 1226
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/50 (30%), Positives = 30/50 (60%)
Frame = +3
Query: 228 RHRGESNVLDNRENTFKG*IFPRKQRQDKVFLRRGSHRRRWKSYSRTGDF 377
+HRG+S+ +R++ ++ + +QRQ R G H R+W S+ ++ D+
Sbjct: 79 QHRGKSHARKHRQSHYE--MLELEQRQQ----RMGKHWRQWMSHLQSPDY 122
>BT022974-1|AAY55390.1| 211|Drosophila melanogaster IP08436p
protein.
Length = 211
Score = 28.7 bits (61), Expect = 6.2
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +1
Query: 154 LEDFLHVAECDEIKAAGLEFTENLPDIEERATFSTTEKTHLKDKYFLESNDKIRCFFEEG 333
+ED L V E E+K+ G E EN + + + L D+ E ND +F+ G
Sbjct: 137 IEDRLKVLEQKELKSGGGEQDENKQESDSEQEEEEDPEAALDDE-MDEDNDYGATYFDNG 195
Query: 334 AI--DADGNLTVEP 369
D D NL P
Sbjct: 196 EAFNDEDDNLDDGP 209
>AY071627-1|AAL49249.1| 511|Drosophila melanogaster RE67487p
protein.
Length = 511
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -3
Query: 524 PGFLK-IYMLCTTAGSIKPSSLQMLFTRSLYV*HLKIGCRRCSA*PTLFNEISGSTVRF 351
PG+LK IY +C KP +S+ H+ +G A TLF + G+T F
Sbjct: 278 PGYLKPIYAVCL---QFKPIRYYKEVIKSMRKMHISVGHNTVMANVTLFRDTDGTTSTF 333
>AE014296-2906|AAO41239.1| 211|Drosophila melanogaster CG33051-PA
protein.
Length = 211
Score = 28.7 bits (61), Expect = 6.2
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +1
Query: 154 LEDFLHVAECDEIKAAGLEFTENLPDIEERATFSTTEKTHLKDKYFLESNDKIRCFFEEG 333
+ED L V E E+K+ G E EN + + + L D+ E ND +F+ G
Sbjct: 137 IEDRLKVLEQKELKSGGGEQDENKQESDSEQEEEEDPEAALDDE-MDEDNDYGATYFDNG 195
Query: 334 AI--DADGNLTVEP 369
D D NL P
Sbjct: 196 EAFNDEDDNLDDGP 209
>AE013599-3196|AAF46721.1| 511|Drosophila melanogaster CG9841-PA
protein.
Length = 511
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -3
Query: 524 PGFLK-IYMLCTTAGSIKPSSLQMLFTRSLYV*HLKIGCRRCSA*PTLFNEISGSTVRF 351
PG+LK IY +C KP +S+ H+ +G A TLF + G+T F
Sbjct: 278 PGYLKPIYAVCL---QFKPIRYYKEVIKSMRKMHISVGHNTVMANVTLFRDTDGTTSTF 333
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,226,315
Number of Sequences: 53049
Number of extensions: 518571
Number of successful extensions: 1485
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1484
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -