Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28e02
(592 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110479-7|CAB54355.1| 288|Caenorhabditis elegans Hypothetical ... 144 5e-35
Z82282-7|CAB05280.2| 584|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z82053-3|CAB04837.2| 240|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z73969-15|CAA98238.1| 546|Caenorhabditis elegans Hypothetical p... 28 4.3
AF072380-1|AAC62467.1| 546|Caenorhabditis elegans Akt/PKB serin... 28 4.3
AC024806-3|AAP13749.1| 363|Caenorhabditis elegans Serpentine re... 28 4.3
Z92804-3|CAB07250.1| 492|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z81037-1|CAB02745.1| 819|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z93393-11|CAB07698.2| 536|Caenorhabditis elegans Hypothetical p... 27 10.0
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 27 10.0
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 27 10.0
AF088285-1|AAC98292.1| 536|Caenorhabditis elegans caspase-relat... 27 10.0
AC006695-9|AAF39977.1| 453|Caenorhabditis elegans Hypothetical ... 27 10.0
>AL110479-7|CAB54355.1| 288|Caenorhabditis elegans Hypothetical
protein Y105C5B.9 protein.
Length = 288
Score = 144 bits (348), Expect = 5e-35
Identities = 69/156 (44%), Positives = 100/156 (64%), Gaps = 2/156 (1%)
Frame = +1
Query: 118 IKSQLITDGYAILEDFLHVAECDEIKAAGLEFTENLPDIEE-RATFST-TEKTHLKDKYF 291
++ + DG+ ++E+ + E DE+K + + ++ E ++ FST E H D YF
Sbjct: 4 LREKFERDGFVVVENVFNDQEIDEMKKSISKIVNDMDLAEHPKSVFSTYDEDKHAADSYF 63
Query: 292 LESNDKIRCFFEEGAIDADGNLTVEPEISLNKVGHALHLLHPIFRCYTYSERVKSICKEL 471
L S+DKIR FFEEGA+D DG LTV + +LNK+GH LH L P F T++ ++++I KE+
Sbjct: 64 LNSSDKIRFFFEEGAVDKDGELTVPKDKALNKIGHGLHFLDPTFEKMTFNSKIQNIFKEI 123
Query: 472 GFIEPAVVQSMYIFKNPGIGSEVVPHQDATYLYXEP 579
G+ EP VVQSMYIFK P IG V H D+T+L +P
Sbjct: 124 GYQEPGVVQSMYIFKQPKIGGAVTDHVDSTFLRVDP 159
>Z82282-7|CAB05280.2| 584|Caenorhabditis elegans Hypothetical
protein T07G12.10 protein.
Length = 584
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 142 GYAILEDFLHV--AECDEIKAAGLEFTENLPDIEERATFSTTEKTHLKDKYFLESNDK 309
GY +L+D + A C+E++ + EN+P + TFS T + Y N K
Sbjct: 199 GYEVLDDSNKILTANCEEVE---MSLCENIPGVNNARTFSNTPYDDFLNIYSTPKNPK 253
>Z82053-3|CAB04837.2| 240|Caenorhabditis elegans Hypothetical
protein T26E3.4 protein.
Length = 240
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 202 GLEFTENLPDIEERATFSTTEKTHLKDKYFLESNDKIRCFFEE 330
G+EFTEN PD T + E ++ ES DK+R EE
Sbjct: 57 GIEFTENYPDEIPIITLNGIEDAFTAER-IAESIDKLRSVAEE 98
>Z73969-15|CAA98238.1| 546|Caenorhabditis elegans Hypothetical
protein C12D8.10b protein.
Length = 546
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 283 KYFLESNDKIRCFFEEGAIDADGNLTVEPEISLNKVG 393
KY ++ND++ CF E AI D + E+ +NK G
Sbjct: 257 KYSFQTNDRL-CFVMEFAIGGDLYYHLNREVQMNKEG 292
>AF072380-1|AAC62467.1| 546|Caenorhabditis elegans Akt/PKB
serine/threonine kinase protein.
Length = 546
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 283 KYFLESNDKIRCFFEEGAIDADGNLTVEPEISLNKVG 393
KY ++ND++ CF E AI D + E+ +NK G
Sbjct: 257 KYSFQTNDRL-CFVMEFAIGGDLYYHLNREVQMNKEG 292
>AC024806-3|AAP13749.1| 363|Caenorhabditis elegans Serpentine
receptor, class w protein40 protein.
Length = 363
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 73 SFCFCKFIASIMHDSIKSQLITDGYAILEDFLHVAECDEIK 195
+ CF F A+I+H I SQ ++ F+ +A CD I+
Sbjct: 43 TICFVGFFANIVHLIILSQKSMRNLSVNVFFIGIAICDTIR 83
>Z92804-3|CAB07250.1| 492|Caenorhabditis elegans Hypothetical
protein K05D4.4 protein.
Length = 492
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 121 KSQLITDGYAILEDFLHVAECDEIKAAGLEFTENLPDIEE-RATFSTTEK 267
K Q + +G A +E FL A L+F+ NLPD+++ + F T K
Sbjct: 433 KRQCLGEGLARMELFLFFANIFNRYDVQLDFSGNLPDLDKSKDNFVTPRK 482
>Z81037-1|CAB02745.1| 819|Caenorhabditis elegans Hypothetical
protein C17E4.2 protein.
Length = 819
Score = 27.5 bits (58), Expect = 7.5
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +1
Query: 139 DGYAILEDFLHVAECDEIKAAGLE-FTENLPDIEERATFSTTEKTHLKDKYFLESNDKIR 315
D A+L DF A D+ +E + + ++EE+ F T E T L D+ N+ +
Sbjct: 482 DMAALLRDFEKFAISDKESKRMVEGCKKKIEELEEQNRFLTVEITKLLDEKEAMLNEAME 541
Query: 316 CFFEEGAIDADGNLTVEPEISLNKVGHA 399
+E + D+D + E + S ++ H+
Sbjct: 542 DDEDESSDDSDMSYEDEEDDSEDEDDHS 569
>Z93393-11|CAB07698.2| 536|Caenorhabditis elegans Hypothetical
protein Y48E1B.13a protein.
Length = 536
Score = 27.1 bits (57), Expect = 10.0
Identities = 19/78 (24%), Positives = 33/78 (42%)
Frame = +1
Query: 94 IASIMHDSIKSQLITDGYAILEDFLHVAECDEIKAAGLEFTENLPDIEERATFSTTEKTH 273
+ + D+ KSQ D ++EDF + + ++ TE+ IE +TF
Sbjct: 2 VLKTIEDNCKSQFDDD---LVEDFNNFQTTSSMSSSTTISTEDFNTIEIESTFEICRSGS 58
Query: 274 LKDKYFLESNDKIRCFFE 327
++ L ND+ FE
Sbjct: 59 YTEEPILGENDEFLIDFE 76
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical protein
D2005.5 protein.
Length = 1119
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = -2
Query: 273 MCFLCCRERCSLLYVWQVFSE---FQSSGFDFITFRNMKKI 160
MC C +E C +Y+ +VFS F S + F+ + +K+
Sbjct: 951 MCSNCSKEFCKSIYIKKVFSNYMVFDPSVWRFLHVESKRKV 991
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical
protein F58G4.1 protein.
Length = 1974
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +1
Query: 376 SLNKVGHALHLLHPIF-RCYTYSERVKS 456
SLNK+ H LH HP F RC +E K+
Sbjct: 662 SLNKLMHMLHQTHPHFIRCIIPNELKKA 689
>AF088285-1|AAC98292.1| 536|Caenorhabditis elegans caspase-related
protein 1A protein.
Length = 536
Score = 27.1 bits (57), Expect = 10.0
Identities = 19/78 (24%), Positives = 33/78 (42%)
Frame = +1
Query: 94 IASIMHDSIKSQLITDGYAILEDFLHVAECDEIKAAGLEFTENLPDIEERATFSTTEKTH 273
+ + D+ KSQ D ++EDF + + ++ TE+ IE +TF
Sbjct: 2 VLKTIEDNCKSQFDDD---LVEDFNNFQTTSSMSSSTTISTEDFNTIEIESTFEICRSGS 58
Query: 274 LKDKYFLESNDKIRCFFE 327
++ L ND+ FE
Sbjct: 59 YTEEPILGENDEFLIDFE 76
>AC006695-9|AAF39977.1| 453|Caenorhabditis elegans Hypothetical
protein W06H8.2 protein.
Length = 453
Score = 27.1 bits (57), Expect = 10.0
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Frame = +1
Query: 181 CDEIKAAGLEFTENLPDIEERATFS-TTEKTHLKDKYFLESNDKIRCFFEEGAIDADGNL 357
C + G +F E E+ F E T ++ +FLE +KIR F+ + G
Sbjct: 268 CRAYENIGFDFVELSGGTYEQLAFQHLKESTKRREAFFLEFAEKIRPVFKNTVVYLTGGF 327
Query: 358 -TVEPEISLNKVG 393
TV + K G
Sbjct: 328 RTVNAMVEAIKSG 340
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,452,720
Number of Sequences: 27780
Number of extensions: 273219
Number of successful extensions: 769
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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